ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957485 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◣ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

DUX4
SIRT1
LAPTM4B
TBC1D1
MAN1A2
INSYN2A
VAC14
LURAP1L
DLX3
KLHL31
IL20
TGIF1
RBPJ
FRG2C
DIAPH3
TUBG1
RETREG3
MTRNR2L1
TEX45
F2
LIMS1
RNF103
SLC8A1
PRRG2
NOSIP
MCTP1
TOGARAM1
KLHL28
ZZZ3
SULT1C4
CMTM6
THEM4
HCAR3
RASGRP3
MMP20
DISP1
MUC3A
TNIP1
SNX16
CCPG1
C15orf65
FRG2
TMEM268
PIWIL4
ICAM2
PPP3R1
METTL17
GSDMD
ANKRD34B
CTCF
DERL3
SERPINE2
E2F3
CCDC33
KCNN3
SERPINB8
TNFRSF12A
CLDN6
THOC6
HCFC1R1
IKZF5
ACADSB
AADAT
FAM172A
LMNA
PLCXD3
BET1
WDR74
MIS18BP1
C15orf39
MMP10
LIMK1
SNX25
GAB1
BCL10
TMEM263
FDFT1
ZNF609
MYO6
ME3
PLXDC2
RICTOR
MYADM
ASB8
REV3L
SPATS2L
TECR
DNAJB1
ZNF267
PPP1R12B
SLC38A9
CNOT1
FNIP2
PANK2
CENPA
RRM2B
ECHDC3
XRN2
AHCYL1
COPS8
PDLIM7
ABLIM1
DNAJB4
CASZ1
MBD1
LRRC61
ARHGAP22
STMN3
PHLDB2
FLRT2
CPNE2
KTN1
KDSR
CDK5RAP2
TGM4
PEDS1-UBE2V1
PEDS1
KMT2A
LOX
RHOBTB2
LAMB3
GAD1
SCD
RILP
IFRD2
BRAP
ACAD10
TAGLN2
SPTBN1
NDE1
MARF1
ZNF540
GNB2
ZNF571
SRSF10
TMTC4
TTYH1
DSP
TENM3
NFKBIL1
ATP6V1G2
SKIL
PLS1
PHF19
ABCC3
LRRC2
ARSI
CTNNB1
C1QTNF7
AMPD1
MACO1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TNRC6B
FOXJ3
JCAD
FMN1
CABP7
BIRC7
AGAP3
GPR63
SEC62
ZNF764
ITPRIP
FBXO46
RET
OTUD7B
TMCO2
PSKH1
PELO
ITGA1
WDR36
ZNF148
ANK2
ALDH1B1
COL3A1
HSPH1
PRKAB2
CHD1L
FSTL3
TLR1
YPEL5
RAD23A
NUP153
CSF2RB
BPTF
NUMB
NOL4L
TBC1D7-LOC100130357
TBC1D7
EPS15
TRAPPC3L
B4GALT7
PDS5B
ARHGAP10
UBR5
ZNF592
RBM27
H2AZ2
ZNF217
MOXD1
SPDYE1
MED23
CXADR
BRIX1
CDKN2AIP
KLF11
UBE2F
STPG3
NELFB
CHRNA9
LENG8
SERPINE1
DECR1
DSTYK
FAT4
SARAF
DOCK9
SETD6
ASIC1
SLC35F2
ANXA8L1
WRNIP1
EPB41L1
EPB41
STK10
TRAM1
TMEM229B
MACIR
ST3GAL2
WARS2
FCHSD2
ETAA1
CPT2
DYRK2
H1-2
ZRSR2
PSMD2
HOATZ
BTG4
H4C5
ITPKC
COQ8B
SEC24B
TRIB1
NCAPH
NFAT5
WDR81
TLCD2
CBFB
COL7A1
BCAT1
KDM6B
VWA5B2
UHRF1
SLC2A14
ZNF341
CCDC200
PAX6
PDGFB
CHST3
ID2
RNFT1
GTF2B
TUSC1
USPL1
HMGB1
MTF2
MEF2D
PEMT
ERCC1
ID1
ZNF575
ETHE1
LMO4
ZNF235
SIAH1
TTC39B
RARA
SLC25A25
NAIF1
ARHGDIA
SMG9
ARHGAP24
FAM110D
H2AZ1
DNAJB14
SMNDC1
SERTAD4
PRSS53
XPO1
TYRP1
EPSTI1
GSDME
PTEN
KLLN
ZFR
UBAC1
DACH1
FHL2
SLC2A2
RHOG
FN1
LDHA
PINK1
MADD
CDCA3
TFPI
ZNRF3
IL6
SLC39A13
SERINC2
MTIF2
RRM1
PIGX
MT2A
CEP19
NDEL1
TCTEX1D4
BTBD19
FDXACB1
C11orf1
ZNF296
GEMIN7
FBXL19
CHMP1B
ZBED2
UTP18
MBTD1
LIMK2
TEAD4
ZCCHC4
NEURL4
C1orf100
TADA1
RABEP1
SP4
CABLES1
IGF2BP1
UBE2B
CDKL3
NPC1
XAF1
IFI35
SAMD14
PDPR
LOXL3
DOK1
FEM1A
NFIC
AURKAIP1
METTL11B
RAPGEF1
DCAF10
PUS10
PEX13
SMAD7
BRD7
AGBL2
CENPE
ZNF142
BCS1L
FAM118A
TMED8
SAMD15
USP30
PMEPA1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SLC7A5
SPACA6
PITX2
NODAL
MAMDC2
TRIM48
FBRS
ZNF664-RFLNA
ZNF664
CCDC92
ID3
SMYD3
OLFM2
SMAD3
CST6
DNAJB5
ROR2
CLDN14
GIP
LEFTY2
TMEM95
KCTD11
HDGF
PPP1R13L
POLR1G
MTRNR2L9
PMF1-BGLAP
PMF1
STAM2
GID4
ATPAF2
SEC31A
LEFTY1
ALOX5AP
TSKU
SMARCD3
UAP1
SSBP3
B3GNT6
CAV1
CSRNP1
PLCXD2
PLAGL1
DDAH1
CCN1
NPM3
FGF8
EP400
BMPR2
SNX18
KAT5
NEURL1B
MYL10
FGF17
DHRS3
MS4A10
MRPL2
KLC4
CXCR5
AGO1
UNC45B
ALDH18A1
PLAU
BMF
ANKLE2
CLCF1
MTHFD1L
STOX2
TRIOBP
WBP1L
ACOX3
HOPX
USP2
CGB5
CGB1
VPS28
NPFFR2
CEP55
IVNS1ABP
CLIP3
CGB8
ITGA2
INPP4B
DVL1
ARHGEF18
UPK3BL2
TMPRSS11D
LTBP1
PSD3
MYBPH
KANK1
FST
PLK3
JMJD1C
CLTB
SREBF1
H2BC11
H2AC11
HAUS7
LAMC2
KLHL5
BACE1
KLF10
DGAT2
DENND2B
OSGIN2
ELAPOR2
FPR3
ILKAP
C11orf42
CER1
CCDC88A
SLAIN1
AGFG2
MTNR1A
GATAD1
RFTN1
PLEK2
H2BC21
H2AC21
H2AC20
NSMCE1
MDN1
P3H2
DRAP1
C11orf68
MYOZ2
GRSF1
NTMT1
RHOD
GAS2L1
SLC6A15
LUC7L2
GADD45B
FMC1-LUC7L2
FMC1
MINPP1
LOC389199
KCNJ18
APC
SLC1A1
LOC100509620
RGPD8
RGPD5
OAZ1
KLRD1
S100A2
MFNG
CDKN1A
SPON2
RUNX1
MINDY3
TBXAS1
CHST11
ASB2
WDR54
POU2F3
C2orf81
SLC9A1
RNF223
B4GALT6
NOS1AP
SOWAHC
SHISAL1
SEPTIN10
KAT6A
ABTB2
AXL
ZNF792
EPG5
LAPTM5
MAP2K3
PHC2
CTPS1
POU5F1
PGK1
NPAS4
KIFAP3
PTPRB
PRDM10
IL17B
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
PIK3CD
FXYD6-FXYD2
FXYD6
PRDM1
CDCA4
GOLGA6C
ARMC7
MYOM3
CFLAR
SLC1A4
PPP6R1
SMIM35
OSM
SIK3
PRMT5
MCM7
AP4M1
SLC36A2
GPR183
BHLHE40
WWC2
GADD45G
AGPS
GOLGA6D
AMPD3
AKIRIN2
PPP1CB
PIM1
KRT80
STX1A
KCNK9
VOPP1
SLC46A3
PAQR9
FGF1
NOTCH3
GLIS3
MARCHF10
MAP3K2
ACSS3
RAB17
ZNF460
BLOC1S2
LPCAT3
ZNF655
VDAC2
LRTM1
AMHR2
ZNF720
RRAD
KCNF1
GPR37L1
LEMD3
ETFB
DUSP1
CD8A
NSMCE4A
KRTAP21-3
HNRNPA2B1
CBX3
LRP12
HSP90AB1
MSX2
PRRT2
PAGR1
MATN2
FSCN1
COL16A1
LRP6
UQCRB
NOCT
KANK4
SFT2D3
BCL11B
FBXL7
UPK3BL1
TSPAN12
LRRC37A3
BEST3
POU2F2
MAP3K9
CKAP2
PALD1
AQP3
SAT1
KLF4
MRGBP
CALD1
MYOM1
OVCA2
EPB42
ROR1
CGB3
TEX46
ZC3H6
RRNAD1
NUF2
ISG20L2
WNT3
RPRM
LBH
CMYA5
MLLT11
MAPK13
CDC42SE1
GJB4
NUP214
UGT1A3
BCL11A
SGK1
MRI1
BAMBI
IGF1
PXN
TES
SCG2
UQCRHL
HERPUD2
H4C12
CDHR2
STK40
SCNN1A
LTBR
LOC100287896
LIPT2
INPP5A
KRTAP4-2
KRTAP4-1
BEGAIN
MTFP1
IL34
CHD2
EOMES
PCK2
NRL
CPD
AFF1
UBA1
PURA
VDAC1
ALDH7A1
HEXB
TTLL2
PLEC
PITPNM3
CALM2
GCNT1
FEM1C
BCAR1
FOXS1
C2orf74
GOLGA6A
DACT2
KANSL1L
CXCR4
MTMR11
H4C11
EIF4E
ANK3
POLD4
DST
ATF7-NPFF
ATF7
TCF7
SHKBP1
CSGALNACT2
CD151
ALK
FAM20C
NDUFS8
PLEKHA7
SLAMF1
TOMM20
CTNNA1
SLC20A1
KCNK3
TXK
SNX14
IGF1R
SLC25A45
NEDD4L
KCNJ16
FRMD8
EPB41L4A
CEMIP
C5orf63
TTLL8
PRICKLE1
CCNI
PALM2AKAP2
KPNA7
CCT5
ATPSCKMT
SMIM8
UQCRC1
TBC1D5
HRG
COMMD1
SCT
CDHR5
ZFAND2A
NEDD9
FAP
KBTBD2
ITLN2
SLC7A2
ABHD17C
TIPARP
HRH1
FAM178B
ZBTB5
PRC1
FLNC
RCAN3
AGXT2
SH2D7
S100A10
ENOX1
RAB33A
PPP2R2A
LTBP3
SLCO5A1
MIXL1
AKAP13
GNL2
BCL9L
TNFAIP3
SUPT6H
SDF2
RHOB
LRP5
RNF213
RCC1
MARCHF7
H3C15
H3C14
H2AC19
H2AC18
TTC9
PTHLH
PAFAH1B1
B4GALT2
ATP6V0B
LONP2
F13A1
ABCC11
UBE2D2
OR4F3
OR4F29
OR4F16
SLC5A3
SLC44A1
MRPS6
GRIA4
FAM168B
ZNF853
RIMBP3C
RIMBP3B
RAB27A
IGFBP3
C5orf46
CDH15
HS3ST2
DGLUCY
ASCL3
C3orf20
TMEM272
TP53TG5
PIEZO1
ZBTB45
SLC4A8
GALNT6
ZSWIM4
PARL
LIMS2
GSK3B
ARHGAP28
SLC51B
ADGRG1
SPOCK3
DENR
USP53
UBAP2
PRDX1
P2RY2
NR2C2
CAMSAP2
ZNF697
RPL23
KLF7
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
INAVA
NIBAN2
HSPB7
GLIPR1L1
CAPS2
BAIAP2
ARHGEF4
LARS2
ANKDD1A
TMEM40
GTF3C3
ANAPC11
ALYREF
ABR
TRPC1
SETD1B
PTPRE
LOC100130520
CD300H
ZNF558
NTN1
ITGA5
ETS1
ZAP70
GNAL
FAM83A
LAMA5
CCNG1
BUD13
ANXA8
MTHFD2
TMOD1
KMT5B
IL17RA
ANGPT2
TRIM55
NOS3
DNAJA1
APTX
ITGAE
TTF1
TINAGL1
MAST2
HNRNPD
CFAP77
RND1
MYT1
IVL
ZMIZ1
CRCP
ADGRF2
ADAMTS18
HOXD13
EVX2
SSBP2
RAD54L2
NINJ1
LHX1
ZSWIM7
TTC32
TTC19
PXT1
OR9I1
NAPRT
MROH6
KCTD20
USP22
FZR1
SBF1
GOLGA6B
DDI2
RAI1
MARS1
GUCA2A
ARHGAP9
THAP4
STAT5B
IKZF3
CDC37L1
ATAD2
RNF32
NRCAM
GTF2A1
GLUL
VANGL2
R3HDML
IL21R
DPPA4
TMEM185A
RCOR3
MLXIP
H2AW
USP47
TRABD2A
MECOM
FOXI1
EXT1
TFF1
LOC102724265
ADCY10
RHOF
NDST2
LDLRAD4
LBR
CSF1R
CDHR3
TMCC2
MARCHF3
MAD2L2
DRAXIN
BMP8B
ADAMTS5
PAWR
TNPO1
SLC35E1
CLSPN
ATP6V1B2
YOD1
S100P
QPCT
PFKFB2
GRIK2
ELMO1
CELA3B
CCN2
SPRR1B
ACTBL2
USP42
TAF13
SPDYE14
SPDYE10P
ZNF354A
SHCBP1
SEMA3E
FAM184A
CCL20
CREB5
SYT14
ELN
CHN1
UNKL
OCA2
MIPOL1
AGPAT3