ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957410 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◣ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

BIRC7
TBC1D1
SKIL
F2
COL7A1
SMAD7
DUX4
PDLIM7
FSTL3
COPS8
SERPINE1
PLCXD2
H2BC21
H2AC21
H2AC20
CLDN14
SMYD3
SPACA6
TLR1
KAT5
PRKAB2
CHD1L
LAPTM4B
MAN1A2
SULT1C4
HAUS7
TNIP1
TMEM95
KCTD11
SEC31A
OLFM2
ERCC1
GAD1
IL20
SMG9
KDM6B
MMP20
KLHL31
TMCC2
FRG2C
YPEL5
TRIOBP
ANKLE2
PPP1R13L
POLR1G
GPR63
ZNF341
WBP1L
PMEPA1
OTUD7B
TNFRSF12A
CLDN6
THOC6
HCFC1R1
GADD45B
LIMS1
RNF103
MTRNR2L1
MTHFD1L
DNAJB5
FPR3
MS4A10
KRT80
C11orf42
ANXA8L1
SDHAF1
CDCA4
HSPB7
MTIF2
ARHGAP22
ZNF460
ANKRD34B
IGFBP3
WDR74
SIRT1
MED13L
CSRNP1
MRPL2
KLC4
ALDH1B1
ID2
NUP214
EP400
EPB42
TAGLN2
GCNT1
ZNF148
CGB5
CGB1
RBPJ
TEX45
SERPINE2
USP30
SLC35E1
USP22
CARD16
VAC14
AXL
SLC44A1
TINAGL1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UAP1
BMF
LIMK2
FBRS
SNX16
ACOX3
CCDC88A
DCAF10
SLC39A13
WWC2
LIF
TGIF1
MTNR1A
PAFAH1B1
GNB2
SH3PXD2A
FNIP2
PTHLH
WDTC1
PEX3
ADAT2
FRG2
HOPX
MANF
ID3
H3C13
H2BC18
MYRF
INPP5A
PDPK1
ZNF592
BHLHE40
SLC46A3
VDAC1
COL16A1
KANK4
MARCHF10
SH2D7
UBAC1
DMTF1
TGM4
GBA
VDAC2
PURA
HNRNPUL1
ZNF34
RPL8
BCAT1
ITCH
NOCT
IGF1
NUAK1
DYSF
PHLDB2
RRAD
MXRA5
GNA12
KMT2A
BMPR2
SMIM4
NT5DC2
GALNT2
BRWD1
ID1
UBE2B
CDKL3
MTRNR2L2
MSH3
DHFR
RARA
MAP2K3
HSDL1
DNAAF1
CLCF1
GZF1
ZMIZ2
HTRA1
ERG
TMEM229B
SCAF11
NSMCE1
GIP
SVOPL
GAPDH
KANK1
FBXL7
RCOR3
TMEM222
ZNF697
ANGPTL4
BCAR1
BACH1
KLF10
YY1
SAMD1
RASSF7
LMNTD2
ABLIM1
IPPK
CD151
UBE2D2
GATAD2B
CBX5
NDUFS7
CTNNA1
BCL10
SYNPO
POLD4
HABP4
THAP11
NUTF2
CENPT
CCDC200
USP47
MED15
ADAM17
GATAD1
HECTD2
S100A2
PHF13
KAT6A
ASCC2
LTBP3
MUC3A
LURAP1L
TUBG1
RETREG3
DLX3
MTRNR2L8
SLC7A5
TMEM268
PITX2
AGAP3
NODAL
LMNA
MAMDC2
DIAPH3
TRIM48
GSDMD
DISP1
ZNF664-RFLNA
ZNF664
CCDC92
LRRC61
LAMB3
GAB1
TRIB1
MYO6
TTC39B
MIS18BP1
CASZ1
NDE1
MARF1
RASGRP3
SLC8A1
SMAD3
CMTM6
THEM4
IKZF5
ACADSB
CST6
ME3
PRRG2
NOSIP
ROR2
PPP3R1
HCAR3
PPP1R12B
ECHDC3
ICAM2
C15orf39
TOGARAM1
KLHL28
BRD7
LEFTY2
INSYN2A
EPB41L1
HDGF
AADAT
MTRNR2L9
RICTOR
METTL17
PMF1-BGLAP
PMF1
CCPG1
C15orf65
H4C5
MYADM
PAX6
TYRP1
FAM172A
CDK5RAP2
STAM2
ZNF267
NFKBIL1
ATP6V1G2
LIMK1
GID4
ATPAF2
FMN1
LEFTY1
KTN1
DACH1
MCTP1
ALOX5AP
CCDC33
TSKU
ANK2
SMARCD3
MMP10
CENPA
CTCF
ZNF540
PSMD2
PDGFB
PLCXD3
TMEM263
SCD
PEDS1-UBE2V1
PEDS1
PIWIL4
DSP
SSBP3
RBM27
PELO
ITGA1
SNX25
FDXACB1
C11orf1
AMPD1
EPB41
B3GNT6
CAV1
EPS15
PLAGL1
DDAH1
CCN1
STMN3
KDSR
CHRNA9
NPM3
FGF8
FHL2
KCNN3
ASIC1
SPATS2L
XRN2
SNX18
FLRT2
NEURL1B
MYL10
FGF17
ZNF571
DHRS3
ITPKC
COQ8B
RILP
DERL3
MOXD1
PLS1
CXCR5
AGO1
UNC45B
ALDH18A1
PLAU
ABCC3
TNRC6B
STOX2
TECR
DNAJB1
MACO1
LRRC2
TMTC4
RRM1
USP2
NUP153
VPS28
NPFFR2
CEP55
EPSTI1
E2F3
IVNS1ABP
FDFT1
CLIP3
CGB8
ITGA2
INPP4B
SARAF
DVL1
TMCO2
ARHGEF18
UPK3BL2
TMPRSS11D
SLC25A25
NAIF1
SLC2A2
BRAP
ACAD10
LTBP1
HOATZ
BTG4
ARSI
PSD3
MYBPH
FST
CABP7
UBR5
NFIC
SERTAD4
PLK3
JMJD1C
CLTB
WDR36
SREBF1
H2BC11
H2AC11
SIAH1
BET1
WARS2
CHST3
LAMC2
KLHL5
BACE1
DGAT2
DENND2B
OSGIN2
ELAPOR2
PRSS53
ILKAP
SLC35F2
CER1
ZFR
UTP18
MBTD1
AHCYL1
SLAIN1
AGFG2
SRSF10
FAM118A
CTNNB1
TFPI
CPNE2
PSKH1
RFTN1
PLEK2
MBD1
VWA5B2
ZNRF3
MDN1
DECR1
ZNF609
P3H2
DRAP1
C11orf68
MYOZ2
C1QTNF7
NUMB
ITPRIP
GRSF1
NTMT1
SERPINB8
RHOD
GAS2L1
NOL4L
SLC6A15
LUC7L2
FMC1-LUC7L2
FMC1
MINPP1
LOC389199
KCNJ18
APC
SLC1A1
DNAJB4
LOC100509620
RGPD8
RGPD5
CSF2RB
PANK2
OAZ1
KLRD1
MFNG
METTL11B
CDKN1A
SPON2
SERINC2
RUNX1
MACIR
CNOT1
BRIX1
MINDY3
TBXAS1
SP4
CHST11
C1orf100
ASB2
WDR54
POU2F3
C2orf81
SLC9A1
RNF223
CDKN2AIP
B4GALT6
NOS1AP
SOWAHC
SHISAL1
SEPTIN10
CPT2
ABTB2
H2AZ1
DNAJB14
ZNF792
EPG5
LAPTM5
PHC2
CTPS1
ARHGDIA
POU5F1
PGK1
NPAS4
KIFAP3
PTPRB
PRDM10
PHF19
IL17B
STK10
SLC39A7
RXRB
RING1
OBSCN
HSD17B8
PIK3CD
PLXDC2
FXYD6-FXYD2
FXYD6
PRDM1
GOLGA6C
ARMC7
MYOM3
CFLAR
SLC1A4
LENG8
PPP6R1
SMIM35
OSM
TMED8
SIK3
SAMD15
PRMT5
MCM7
AP4M1
ZZZ3
SPTBN1
ZNF575
ETHE1
TRAPPC3L
IFI35
TBC1D7-LOC100130357
TBC1D7
SLC36A2
ASB8
ARHGAP24
GPR183
LOX
GADD45G
AGPS
GOLGA6D
UHRF1
AMPD3
AKIRIN2
ZBED2
PPP1CB
PIM1
FCHSD2
STX1A
KCNK9
VOPP1
PAQR9
CABLES1
USPL1
TADA1
SPDYE1
HMGB1
FGF1
NOTCH3
CXADR
GLIS3
MAP3K2
FOXJ3
ACSS3
RAB17
JCAD
BLOC1S2
LPCAT3
ZNF655
LRTM1
AMHR2
ZNF720
KCNF1
GPR37L1
DYRK2
LEMD3
ETFB
DUSP1
CD8A
NSMCE4A
KRTAP21-3
HNRNPA2B1
CBX3
LRP12
HSP90AB1
MSX2
PRRT2
PAGR1
MATN2
FSCN1
SLC2A14
LRP6
FAT4
UQCRB
GTF2B
ETAA1
SFT2D3
BCL11B
UPK3BL1
TSPAN12
IL6
LRRC37A3
BEST3
POU2F2
MAP3K9
CKAP2
PALD1
AQP3
SAT1
KLF4
MRGBP
CALD1
NDEL1
MYOM1
H1-2
OVCA2
SETD6
ROR1
CGB3
TEX46
ZC3H6
TENM3
RRNAD1
NUF2
ISG20L2
WNT3
RPRM
LBH
CMYA5
TUSC1
MLLT11
MAPK13
CDC42SE1
GJB4
IFRD2
UGT1A3
BCL11A
SGK1
MRI1
BAMBI
REV3L
PXN
TES
SCG2
UQCRHL
HERPUD2
H4C12
CDHR2
STK40
SCNN1A
LTBR
LOC100287896
LIPT2
KRTAP4-2
KRTAP4-1
BEGAIN
MTFP1
IL34
CHD2
EOMES
PCK2
NRL
CPD
RET
AFF1
UBA1
ALDH7A1
HEXB
TTLL2
PLEC
PITPNM3
CALM2
FEM1C
FOXS1
C2orf74
GOLGA6A
DACT2
KANSL1L
CXCR4
MTMR11
H4C11
EIF4E
ANK3
DST
ATF7-NPFF
ATF7
TCF7
SHKBP1
SLC38A9
CSGALNACT2
ALK
FAM20C
ZNF296
NDUFS8
MED23
GEMIN7
PLEKHA7
SLAMF1
TOMM20
SLC20A1
KCNK3
TXK
SNX14
IGF1R
SLC25A45
NEDD4L
KCNJ16
FRMD8
EPB41L4A
CEMIP
C5orf63
AGBL2
TTLL8
PRICKLE1
CCNI
PALM2AKAP2
KPNA7
CCT5
ATPSCKMT
COL3A1
SMIM8
DOCK9
UQCRC1
TBC1D5
HRG
COMMD1
SCT
CDHR5
ZFAND2A
NEDD9
FAP
KBTBD2
ITLN2
SLC7A2
ABHD17C
TIPARP
HRH1
FAM178B
ZBTB5
PRC1
FLNC
NCAPH
RCAN3
B4GALT7
AGXT2
S100A10
ENOX1
DSTYK
RAB33A
PPP2R2A
MTF2
SLCO5A1
MIXL1
AKAP13
SEC24B
MEF2D
GNL2
BCL9L
TNFAIP3
SUPT6H
SDF2
RHOB
LRP5
RNF213
RCC1
MARCHF7
H3C15
H3C14
H2AC19
H2AC18
TTC9
B4GALT2
ATP6V0B
LONP2
F13A1
ABCC11
OR4F3
OR4F29
OR4F16
SLC5A3
MRPS6
GRIA4
FAM168B
ZNF853
RIMBP3C
RIMBP3B
RAB27A
C5orf46
CDH15
HS3ST2
DGLUCY
ASCL3
C3orf20
TMEM272
TP53TG5
PIEZO1
ZBTB45
SLC4A8
GSDME
GALNT6
ZSWIM4
PARL
LIMS2
GSK3B
ARHGAP28
SLC51B
ADGRG1
SPOCK3
NPC1
DENR
USP53
UBAP2
RRM2B
PRDX1
P2RY2
NR2C2
CAMSAP2
RPL23
RHOBTB2
KLF7
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
INAVA
NIBAN2
H2AZ2
GLIPR1L1
CAPS2
BAIAP2
ARHGEF4
TEAD4
LARS2
ANKDD1A
TRAM1
TMEM40
GTF3C3
ANAPC11
ALYREF
ABR
TRPC1
SETD1B
PTPRE
LOC100130520
CD300H
ZNF558
NFAT5
SEC62
NTN1
ITGA5
ETS1
ZAP70
GNAL
FAM83A
LAMA5
CCNG1
BUD13
ANXA8
MTHFD2
TMOD1
LMO4
KMT5B
IL17RA
ANGPT2
TRIM55
NOS3
DNAJA1
BPTF
APTX
ITGAE
TTF1
SAMD14
MAST2
HNRNPD
CFAP77
RND1
MYT1
IVL
ZMIZ1
CRCP
ADGRF2
ADAMTS18
HOXD13
EVX2
SSBP2
RAD54L2
NINJ1
LHX1
ZSWIM7
TTC32
TTC19
PXT1
OR9I1
NAPRT
MROH6
KCTD20
FZR1
SBF1
GOLGA6B
DDI2
RHOG
RAI1
MARS1
GUCA2A
ARHGAP9
THAP4
STAT5B
IKZF3
CDC37L1
ATAD2
RNF32
NRCAM
GTF2A1
GLUL
VANGL2
R3HDML
IL21R
DPPA4
TMEM185A
MLXIP
H2AW
TRABD2A
MECOM
FOXI1
EXT1
TFF1
LOC102724265
ADCY10
XPO1
RHOF
NDST2
LDLRAD4
LBR
CSF1R
IGF2BP1
CDHR3
MARCHF3
MAD2L2
DRAXIN
BMP8B
ADAMTS5
PAWR
TTYH1
TNPO1
CLSPN
ATP6V1B2
YOD1
ST3GAL2
S100P
QPCT
PFKFB2
GRIK2
ELMO1
CELA3B
CCN2
SPRR1B
ACTBL2
USP42
TAF13
SPDYE14
SPDYE10P
ZNF354A
SHCBP1
SEMA3E
FAM184A
CCL20
CREB5