ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025673 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◣ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

SNX25
CFAP97
MTRNR2L2
MSH3
DHFR
PEMT
DUX4
MTRNR2L8
PMF1-BGLAP
PMF1
NME1
UTP25
NME2
DRG2
MTRNR2L9
SLC5A6
CAD
ATRAID
ZNF296
GEMIN7
THOP1
SGTA
LSM12
G6PC3
MSTO1
GTF3C4
DDX31
SNRPD1
AKAP10
PTDSS2
ANO9
CCDC86
GARS1
ZSWIM7
TTC19
GATAD2A
MTHFD1L
SRSF1
GID8
DIDO1
SLC25A10
MRPL12
EIF3B
GOLIM4
TBL1XR1
TENT4A
YBX2
HMGA1
SMYD2
PCBP1
DR1
GABPB1
GET4
SAMD10
PRPF6
EEF2K
PPRC1
AP5S1
PRKAR1B
DNAAF4
SNF8
FAF1
CDKN2C
CLN6
RPLP0
GCN1
COPS3
KEAP1
ZNF485
LRRC58
GPS2
EIF5A
PARP1
TMEM248
SCAND1
UTP4
DERPC
CHTF8
CBWD5
CBWD3
CBWD6
DHX33
PMS2
AIMP2
NOC4L
DDX51
OLFM2
SPRYD4
NRAS
LARP1
HNRNPU
TRIAP1
COX6A1
DCP1A
EEF1AKMT3
DIAPH1
METTL1
CYP27B1
UAP1L1
MAN1B1
PLD6
IGF2BP3
FNTA
RAN
PBRM1
GNL3
GTF3A
TRMT6
MCM8
ODC1
TDG
C12orf73
WNT2B
MAPKAPK5
ADORA2B
TSNAX
CLPTM1L
EIF4H
MLLT1
NT5M
TRPM7
NOL8
CENPP
KMT5B
MRPL15
MDN1
STAMBPL1
DUS2
DPEP2NB
DDX28
KIF5C
SLC3A2
MBD3
PSMG4
JADE2
PFN2
KLF16
SYT5
TIMM23
ANP32B
PIGL
NCOR1
SLC16A1
TSR1
SGSM2
CCT2
CENPV
NOL10
LAMP1
SECISBP2
CKS2
HNRNPA2B1
CBX3
INPP5A
UTP11
FHL3
PIAS2
KATNAL2
NCL
UBE2G2
OSGIN1
MAP2K2
UNKL
C16orf91
GOLGA3
COA8
BAG5
SLC25A45
FRMD8
SEH1L
SFSWAP
BAX
DPH5
NPM1
ARSG
SLC16A6
FLCN
PSME3
BECN1
CELSR3
NOC3L
PTMA
ASAP1
MNT
MTHFD2
TIMM23B
PARG
LONP1
CATSPERD
MED9
IARS1
GNPDA1
PLK3
TCTEX1D4
BTBD19
HNRNPL
GAR1
CLUAP1
C16orf90
PAQR7
NUP153
SLC25A33
RHEBL1
KMT2D
CLTC
WDR43
ZSCAN22
SHLD2
GLUD1
SMARCC1
ACBD6
PDP2
ELAVL3
GPR157
FAN1
RCOR3
PGP
BRICD5
NELFCD
E4F1
FAM166A
SLC34A3
TUBB4B
URB2
TAF5L
SLC35E2B
NCBP2AS2
NCBP2
RHOQ
ATP6V1E2
SLC35E2A
CBWD1
TRIM8
FARSB
HES4
EBNA1BP2
CFAP57
ATXN2
FAM156A
FAM156B
GYG1
CTPS1
YBX1
SPHK1
PXK
MRPL55
RTN3
ATL3
UBE2K
FABP5
SLC9B2
SLC24A1
GNAT2
AMPD2
RAD50
POPDC3
NOCT
PUS1
C1QBP
GCFC2
PPIA
MRPL3
RPS5
RNF225
PINX1
FAM227B
DTWD1
NAA80
IFRD2
HYAL3
GTF3C5
NACA
HNRNPF
AEN
SIAH2
SOD2
WDR74
STX5
WTAP
AKAP1
CLCN7
QSER1
B9D1
YRDC
C1orf122
ZZZ3
SLCO4A1
ANKRD40
PEBP1
RNASEH1
B3GNTL1
TXLNA
ITGB3BP
EFCAB7
ANTKMT
USP32
HAGHL
CCDC78
NPHP1
MTLN
ZC3H8
NUP50
SPTSSA
R3HDM2
INHBC
RPIA
CTSC
IMPACT
SUGCT
MPLKIP
HSPA9
ZNF202
THNSL1
FBXW8
ZNF326
RAI14
TAOK2
EMC8
COX4I1
MRPL21
IGHMBP2
RNMT
FAM210A
PUM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NOLC1
RALGDS
METAP1
TBRG4
PRPF3
THAP9
SEC31A
PBX2
GPSM3
PDS5A
EIF3A
EEA1
ANP32A
SNX5
MGME1
PPAT
PAICS
MAP2K3
SUPT3H
C10orf95
ZNF3
COPS6
CHD9
USP16
RWDD2B
METAP1D
COL1A1
PXT1
KCTD20
ATAD2
DCTD
EHD2
ADGRB1
LSM4
TXNL4A
RBFA
RRM2
NOP16
HIGD2A
USP36
TRMT61A
CKB
FOXK1
MID1IP1
EPOP
TRMT61B
HS3ST3A1
TOMM34
STK4
SLC39A14
RAD9A
PPP1CA
EIF2D
EPRS1
STK19
DXO
LOC110384692
C4B_2
C4B
C4A
TSPAN4
POLR2L
TRABD
PKP4
CCDC148
TRIP6
SRRT
MAT2A
TTC7A
MCFD2
ADCK1
STBD1
SEC14L1
GFPT1
USP42
ICE2
AKT3
RBM28
SLC44A1
MICALL1
SUGP2
ARMC6
SIK1B
SIK1
SRSF9
DYNLL1
CYCS
RBBP8
MFAP2
GPAM
ZKSCAN2
MRPL4
UNC45B
NLE1
GDI2
AGPAT5
PHF3
TET3
PYURF
PIGY
HERC3
GCLM
BRWD1
DNAJC27
SREK1
AATF
FRG2C
BHLHE40
NUDCD2
HMMR
NR1D1
PRKDC
MCM4
SELENOO
CACNB3
CCDC116
YDJC
LRRC37A3
KTN1
IVNS1ABP
CARNMT1
MMAA
NT5C3A
IPO11
DIMT1
FBXO5
TAF4B
MTF2
GTF2H2
NDUFS1
EEF1B2
HLTF
PIP4P1
OSGEP
APEX1
ZNF384
TRPC4AP
TMEM268
KCNJ18
KDM6B
CRLS1
ZNF333
CITED2
PALM2AKAP2
PFAS
CTC1
BCAT1
LRP6
TEX46
KDM1A
ARL4A
C8orf33
HPS5
GTF2H1
UBAP2L
C1orf43
RPS23
ATP6AP1L
NDUFS7
TRAP1
ZNF410
GTF2H3
EIF2B1
PHF7
BAP1
SELENOH
UNG
ALKBH2
INO80
ZFP36L2
QSOX2
GPR89A
STARD7
DPY19L4
QTRT1
FAM83G
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
CST6
EIF1AD
BANF1
CCDC125
WDR3
GDAP2
RRP1B
HSF2BP
CTNNB1
TXNDC5
LCOR
TMEM250
TBL1X
PIK3R3
ORAI1
RNASEH2C
KAT5
CZIB
TNS2
BCL2
RAD21
SDF4
B3GALT6
PCID2
CUL4A
EIF3D
FAXDC2
CNOT8
CHERP
UBE2Q1
CHRNB2
TPRA1
NFAT5
COX10
TRIP13
BRD9
TRIM16
HPS1
DDI2
URB1
FAM120A
MRPL24
HDGF
FAM133B
THOC5
MAP4K5
ATL1
IGF2BP1
STEAP1B
WDR17
GTF3C6
PSMA2
TVP23B
PSMC2
DNAJC2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZC3H6
R3HCC1
PWP1
ING5
ZNF276
VPS9D1
ANKLE2
ADPGK
MACIR
SUPT5H
RPS16
PEX3
ADAT2
MTERF4
ZBTB25
ZBTB1
ZNF598
NPW
APP
SLF2
TMEM167B
PMP22
POGK
C14orf93
ZBTB24
GTPBP4
NBPF1
DCAF8
KNOP1
ZBTB44
LLGL2
TSEN54
CASKIN2
ZMPSTE24
PET117
KAT14
G3BP1
DDX42
CCDC47
MRPS17
USP14
GNB2
MUC1
TAF5
CNBP
CHD1L
THUMPD3
MCIDAS
CCNO
PAPSS1
SPG7
STAT1
DNAJC11
EIF3M
NEURL4
ACAP1
FLVCR1
REPIN1
UTP18
MBTD1
RNF166
CTU2
TNRC18
LOC100129484
HK2
KPNB1
RIOX2
TUBA1C
BUD13
GPN3
FAM216A
ENO1
WDR31
BSPRY
CALM1
ADK
LANCL2
PUSL1
ACAP3
OTUD7B
KCNQ5
RRS1
ADHFE1
L3HYPDH
JKAMP
GPSM1
DNLZ
CARD9
BRAP
ACAD10
PLCB4
TIPIN
PES1
ZNF205
CCDC88A
SHMT1
ZSCAN10
PUF60
HMGB1
USPL1
MVK
USP22
DGLUCY
AKR1A1
GNAI2
CDK13
GNA13
TMEM258
FEN1
MTCH1
RAB3IL1
SRSF11
LRRC40
FAM20B
ZFP62
CASKIN1
KHDRBS1
POLR2J3
RPS2
RNF151
TBL3
NOXO1
TMED9
B4GALT7
SREBF1
URI1
SEC61A1
ZNF236
MRRF
FXN
C16orf70
LMNA
SP3
FANCI
HSF1
BOP1
ZP3
C12orf50
C12orf29
PPAN-P2RY11
PPAN
ANGPTL6
WASHC2C
P2RY11
SH2B2
TSPAN31
CDK4
MARCHF9
PSMB2
PGRMC2
MRPL40
HIRA
SEC13
MPZL1
HEATR1
SMIM12
ZNF292
CANX
DEGS1
HSPE1-MOB4
HSPE1
HSPD1
MARVELD1
USP9X
SCFD2
MTF1
ATL2
PIP4P2
CXCL5
STAG1
ZMYND10
RASSF1
TUSC2
GSK3A
ERF
CTF1
BCL7C
SNRPG
FAM136A
CCNL1
SPTY2D1
PSMF1
SRRM2
TIMM17A
LMOD1
NOM1
DPH2
B4GALT2
ATP6V0B
FCHSD2
WDR18
ZFP91
LPXN
DDX19A
SLC39A3
INTS1
TTLL4
ZNF121
PLAC8
N6AMT1
NBEAL2
CCDC12
PPP4R3B
LHX9
C1orf53
CSE1L
POLR1F
TMEM41A
PDPR
UBA52
ZNF639
YARS1
S100PBP
BCAR3
SCO1
ADPRM
PDHB
ARRDC2
HDAC7
TRAF3
SMC3
SCD
TBCCD1
DNAJB11
UBE2S
NSMF
SRM
POLR3D
RPL36
MICOS13
HSD11B1L
RBBP7
ATP6V0C
AMDHD2
PTDSS1
MTERF3
SAMD13
VARS1
MARCHF8
NUDT1
MRM2
NUF2
MAD1L1
NAT10
TATDN1
NDUFB9
ZMYND19
MORF4L2
CDCA4
TMEM70
ELOC
LSG1
MRPS25
PRR7
SLTM
NR1H3
ACP2
MDM4
SLC35G1
HSP90AB1
SLC35B2
COPS7A
EPB41
PUS7
NFKBIE
XPOT
RNF220
PAQR3
PREP
STX16
RRP15
FBL
SERBP1
KANSL2
TRA2B
SEPTIN9
GPR176
CCDC138
WWP2
NOB1
TSPAN10
NPLOC4
TACO1
ZC2HC1C
ACYP1
EIF4B
PFKFB3
ACSF3
RBM39
PAPOLA
KDM2A
ERLIN1
CDC25B
PURB
PARP16
RPL18A
TOP3A
SMCR8
FRAT2
RNF103-CHMP3
RMND5A
SLC2A4RG
LIME1
PACS1
WDR4
RSL1D1
MTG1
SF3A3
MTIF2
TRUB2
COQ4
ACYP2
DPH6
GSR
PSME4
SCMH1
UBE2D3
HDAC10
TUBGCP6
RIN1
GID4
ATPAF2
NUDT9
CISD2
PAFAH1B2
PMPCA
ENTR1
AEBP2
GNPNAT1
LARP4
FAM186A
PHF19
E2F5
ARID1B
REV1
FAM98A
ZNF34
RPL8
ZNF517
IRF2BP2
FOXO3
LDHB
NCR3LG1
FLRT2
COQ8A
ELAC1
TRIM32
ASTN2
JOSD2
ASPDH
DLST
TOP1
SPATA1
GNG5
IDE
HSPA8
PRR22
DUS3L
P4HB
SSB
ARHGDIA
GEMIN8
YTHDF2
TMEM17
LTV1
TMA16
GOSR2
CYB561
AP3S1
PSD3
EDN1
NOL11
NPIPB15
TP53BP2
POLR1B
NOTCH2
RSBN1L
MLXIP
DLAT
THRAP3
SPOUT1
RANBP3
UBR3
METTL5
EED
ARRDC3
MRPL44
ZC3H15
OR6B2
NDUFA10
AVEN
KANSL1
LRRC59
COA1
TRIM47
DHX37
BRI3BP
COQ2
GFM1
DYM
ZNF18
ZNF131
TFAP4
RNF126
ALMS1
HRK
CUEDC1
SEPTIN5
GP1BB
HEXA
PCNA
TMEM230
TBC1D24
NTN3
UCHL3
COMMD6
RPL22
RNF207
SYNCRIP
SHQ1
FBXO4
RINT1
THBS4
MTX3
ATP5F1E
WTIP
ZNF496
SLC39A11
EPM2A
VEGFA
PRMT5
MPHOSPH10