ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025676 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◣ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

PMF1-BGLAP
PMF1
UTP25
DUX4
PEMT
MTRNR2L2
MSH3
DHFR
MTRNR2L9
MTRNR2L8
MAMDC2
NME1
KIF5C
BAX
CCDC86
NME2
MLLT1
TRIM48
TRIAP1
COX6A1
SLC35E2A
ZNF485
NOC4L
DDX51
SLC35E2B
PHF7
BAP1
SNRPD1
FAM98A
COLEC11
UNC45B
NLE1
SSNA1
ANAPC2
AKAP10
SNX25
CFAP97
RGPD2
RGPD1
MRPL55
DDX42
CCDC47
ZNF296
GEMIN7
P3H4
FKBP10
TBL1XR1
GTF3C4
DDX31
DHX33
TENT4A
NPM1
DRG2
GPS2
EIF5A
FAF1
CDKN2C
SRSF1
CWC25
TMEM248
MARVELD1
PCBP1
LSM12
G6PC3
IARS1
ZFP36L2
UBE2K
CBWD5
CBWD3
MTHFD1L
TET3
CBWD6
YBX2
SNRPE
RAN
HMGA1
AP5S1
DUS2
DPEP2NB
DDX28
RAD50
CLUAP1
C16orf90
MRPL3
NOC3L
SLC25A10
MRPL12
THOP1
SGTA
RBM42
SELENOO
ZNF639
COPS3
IGF2BP3
KCNQ5
PIGL
NCOR1
EIF3B
MAPKAPK5
CLCN7
EBNA1BP2
CFAP57
ADORA2B
PTDSS2
ANO9
NOP16
HIGD2A
MED9
SLC5A6
CAD
ATRAID
TMEM167B
ICE2
RPLP0
GCN1
DR1
CENPV
ZC3H3
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DIAPH1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LARP1
USP22
DPH5
ABT1
MDN1
SYNCRIP
NCBP2AS2
NCBP2
PRR22
DUS3L
SPRED1
HNRNPF
ETF1
ZNF804A
FRA10AC1
CNBP
PIP4P1
OSGEP
APEX1
UTP4
DERPC
CHTF8
ZSWIM7
TTC19
UNKL
C16orf91
SNF8
SMYD2
UBFD1
EARS2
PWP1
NUDT1
MRM2
PBX2
GPSM3
PDCD11
ATP5MD
SECISBP2
CKS2
THNSL1
VMO1
PSMB6
GLTPD2
USP32
MAST2
PLD6
SNX9
MRRF
RRM1
PDS5A
TNRC18
LOC100129484
SLC35E1
ARSG
SLC25A33
MEF2D
MAP2K3
ZBTB44
KMT5B
LRP6
RTN3
ATL3
CELSR3
EEF2K
PLK3
TCTEX1D4
BTBD19
RCC2
POGK
KLF16
XPO5
POLH
EPRS1
PMS2
AIMP2
PPRC1
SYT5
SPTLC1
OSGIN1
WDR4
TBRG4
TAF5
METAP1D
GET4
CDC25B
TRAP1
NUGGC
ELP3
RPL10A
FNTA
PRKAR1B
SCAND1
GTF2H3
EIF2B1
COA8
BAG5
DNAAF4
CMSS1
NR1D1
RNF166
CTU2
IPO11
DIMT1
YARS1
S100PBP
CTU1
GPAM
PBRM1
GNL3
LONP1
CATSPERD
GOLIM4
PFAS
CTC1
FOXK1
MSTO1
HAX1
TOMM34
STK4
COX10
SAMM50
P2RX2
LRCOL1
HTATSF1
BRS3
ADPGK
NUMBL
EIF4H
MRPS17
SLCO4A1
RRP1B
HSF2BP
ASAP1
TIMM23B
PARG
NEURL4
ACAP1
SRRD
HPS4
GATAD2A
RALGDS
ELK4
NCOA5
DCP1A
TMEM38A
SMIM7
UTP18
MBTD1
PKN2
PRPF4
CDC26
SPRTN
EXOC8
ANKRD26
N6AMT1
PHF12
RAB35
DNAJA3
CORO7-PAM16
CORO7
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
PGP
SMARCA4
BRICD5
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
PAGR1
MAZ
TUBD1
RPS6KB1
FAM220A
VDAC3
MVP
KHDRBS1
ENTPD6
POLA2
APOLD1
SDHA
CCDC127
CXorf38
PRMT2
RAD21
SMIM11B
SMIM11A
ACTN4
LUC7L2
SRSF10
BNIP3
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
SAYSD1
TMEM143
SYNGR4
BANP
MCRS1
PDRG1
TOLLIP
ATP6V0E2
SAMHD1
FAM122A
NBPF1
ITPA
DDRGK1
CENPBD1
PPP6R1
ZBTB17
GTF3A
RANBP3
EID2B
EID2
EHMT1
ABCF3
DAGLB
RABIF
TMEM250
NPRL3
UAP1L1
MAN1B1
FAM24B
LYRM7
HINT1
RPP38
ACBD7
THAP7
RAX2
MRPL54
APBA3
SPPL2B
LSM7
CHMP7
CBX5
WIPI2
HNRNPA1
HNRNPH1
MYPOP
ZNF12
ABCA3
PRR30
PREB
HNRNPL
RAB18
MIS18A
NDEL1
TK2
CKLF-CMTM1
CKLF
MTHFSD
FMC1-LUC7L2
FMC1
USP21
IFNAR1
NAGK
FAM71E1
EMC10
PPOX
SH3YL1
ACP1
MOK
CRTC1
ALKBH5
SLC2A11
TMED4
DDX56
XRCC2
INTS13
FGFR1OP2
PATL1
PITPNB
SUMF2
LOC100287896
LIPT2
KDM8
C19orf81
RCBTB2
MAP2K7
CBY3
RRP1
C1orf74
PPP1CB
YEATS4
PPP2CA
UFC1
RPL36
MICOS13
HSD11B1L
CDC7
WWP2
NOB1
FAM200B
SLX4
SELENOI
ADGRF3
MRPS18C
HELQ
FADD
NELFCD
PTK2
TMEM141
CCDC183
SOD2
SPDYE6
LOC100289561
MAP2K2
DCAF8
MRPL45
PTPN4
SAFB
SAFB2
ZNF576
IRGQ
GPI
OARD1
NFYA
CHD1
FXYD3
RBM17
MRPL24
HDGF
OPA1
FUT8
MTCH2
TRIM37
SMG9
VPS13A
CACYBP
NANP
LAMP1
ZNF583
HASPIN
FAM120B
NUP107
AMZ2
MRFAP1L1
BLOC1S4
OSCAR
NDUFA3
HP1BP3
RALGAPB
TOMM20
DYNC2I1
RTL10
GNB1L
POLR2J3
NUP50
TRMO
MSL2
GMCL1