ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025674 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◣ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UNC45B
NLE1
PMF1-BGLAP
PMF1
DUX4
GPAM
SLC35E2A
SLC35E2B
NOC4L
DDX51
SSNA1
ANAPC2
MRPL55
MTRNR2L2
MSH3
DHFR
MED9
CWC25
RBM42
DRG2
NUP153
MTRNR2L8
ADPGK
EAPP
SIRT4
PSMB2
LSG1
CRKL
FAM149B1
ECD
PEX12
AP2B1
LANCL2
MRM3
GLOD4
TAF12
TMEM107
VAMP2
MAGOHB
NOP9
DHRS1
TRMT61B
RPS2
RNF151
TBL3
NOXO1
CCDC86
PHF7
BAP1
PARP16
SRRD
HPS4
MRPL2
KLC4
CUL7
WDR74
STX5
MTRNR2L9
AASDH
TRIAP1
COX6A1
UTP25
FAF1
CDKN2C
SPTLC1
SMG8
ERCC6L2
DNAJC19
FAM228B
TP53I3
SF3B6
KIF5C
PDCD7
ATXN1L
BDP1
RPL9
LIAS
RMDN3
GCHFR
FBXO34
LMBR1
MAMDC2
NME1
RPS6KB2
PTPRCAP
TRIM48
GTF2H3
EIF2B1
TBRG4
DCAF8
COA8
BAG5
PTOV1
VMO1
PSMB6
GLTPD2
DPH5
PEX10
JOSD2
ASPDH
PTPN6
C12orf57
NCOA5
RANBP2
RBBP5
RRM1
STXBP4
COX11
METTL25
CCDC59
MTF2
RRNAD1
ISG20L2
BRAF
WASHC5
NSMCE2
ZSWIM7
TTC19
EPRS1
RPLP0
GCN1
HAUS5
COMMD1
CCT4
DHX40
NEMF
WFDC3
DNTTIP1
NUGGC
ELP3
SSU72
NUDT9
KPNB1
ZNF330
RLF
HDAC10
TUBGCP6
TARS2
RPS7
EGR1
OR6B2
NDUFA10
CENPE
TRIM7
CCAR2
C8orf58
ANAPC5
ANKRD40
PMVK
SMAD7
TM9SF1
IPO4
FAM98B
TCF4
PKN2
NDUFS7
TMEM259
CNN2
RALGAPA1
FANCD2
ZDHHC3
EXOSC7
ZNHIT6
HES1
TRMT5
SLC38A6
UBB
H4C11
H4C12
H2BC14
H2AC14
FAM122A
TTI2
DNAJB4
NUF2
NCAPH2
LMF2
ABT1
INTS12
GSTCD
RPS8
FOXJ3
RAVER1
ICAM3
POLR1F
FLCN
H2BC15
H2AC15
GRAP
MIA3
ZNF547
TRAPPC2B
ZC3HC1
LEO1
NUP214
SHF
VPS37B
MRPL44
ADORA2B
WASL
GRAPL
SAMD11
C8orf33
MPZL1
ARL6IP1
DLAT
ZNF165
OR1F12
MAN2C1
NBEAL1
GGCX
PEMT
CRLS1
TMEM79
SMG5
DENR
SPRTN
EXOC8
ANKRD26
N6AMT1
PHF12
RAB35
DNAJA3
CORO7-PAM16
CORO7
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
PGP
SMARCA4
BRICD5
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
PAGR1
MAZ
TUBD1
RPS6KB1
FAM220A
VDAC3
MVP
KHDRBS1
ENTPD6
POLA2
APOLD1
SDHA
CCDC127
CXorf38
PRMT2
RAD21
SMIM11B
SMIM11A
ACTN4
LUC7L2
SRSF10
FAM98A
BNIP3
VPS26B
NCAPD3
LONP1
CATSPERD
SNAP47
JMJD4
ZC3H8
SAYSD1
TMEM143
SYNGR4
BANP
MCRS1
PDRG1
TOLLIP
XPO5
POLH
ATP6V0E2
SAMHD1
NBPF1
ITPA
DDRGK1
CENPBD1
PPP6R1
ZBTB17
GTF3A
RANBP3
EID2B
EID2
EHMT1
ABCF3
DAGLB
RABIF
TMEM250
NPRL3
UAP1L1
MAN1B1
FAM24B
LYRM7
HINT1
RPP38
ACBD7
THAP7
RAX2
MRPL54
APBA3
SPPL2B
LSM7
CHMP7
CBX5
WIPI2
HNRNPA1
HNRNPH1
MYPOP
ZNF12
ABCA3
PRR30
PREB
HNRNPL
RAB18
MIS18A
NDEL1
TK2
CKLF-CMTM1
CKLF
MTHFSD
FMC1-LUC7L2
FMC1
USP21
IFNAR1
NAGK
FAM71E1
EMC10
PPOX
SH3YL1
ACP1
MOK
CRTC1
ALKBH5
SLC2A11
TMED4
DDX56
XRCC2
INTS13
FGFR1OP2
PATL1
PITPNB
SUMF2
LOC100287896
LIPT2
KDM8
C19orf81
RCBTB2
MAP2K7
CBY3
RRP1
C1orf74
PPP1CB
YEATS4
PPP2CA
UFC1
RPL36
MICOS13
HSD11B1L
CDC7
WWP2
NOB1
FAM200B
SLX4
SELENOI
ADGRF3
MRPS18C
HELQ
FADD
NELFCD
PTK2
TMEM141
CCDC183
SOD2
SPDYE6
LOC100289561
MAP2K2
MRPL45
PTPN4
WDR4
SAFB
SAFB2
ZNF576
IRGQ
GPI
OARD1
NFYA
CHD1
FXYD3
RBM17
MRPL24
HDGF
OPA1
FUT8
MTCH2
TRIM37
NPM1
SMG9
SRSF1
VPS13A
CACYBP
NANP
LAMP1
ZNF583
HASPIN
FAM120B
NUP107
AMZ2
MRFAP1L1
BLOC1S4
OSCAR
NDUFA3
THOP1
SGTA
HP1BP3
RALGAPB
TOMM20
DYNC2I1
RTL10
GNB1L
POLR2J3
NUP50
TRMO
MSL2
GMCL1
DPF2
EIF2D
AKAP1
SNRNP70
CCNQ
TDP2
ACOT13
CCT5
ATPSCKMT
THAP5
DNAJB9
GDF5
CEP250
SPOP
SARS1
SRRM1
EEF1AKMT1
TAX1BP3
EMC6
ACAT2
TOR1AIP2
TOR1AIP1
CRB1
CAPZA2
GATD3B
GATD3A
SPDYE7P
POM121
INTS7
DTL
ASNSD1
ASDURF
TMEM139
CASP2
PARK7
THOC3
COP1
SMIM14
CALR
NAPG
PPME1
C2CD3
MAP1LC3B
FBXO31
GRB2
DHDDS
AP3B1
UNG
ALKBH2
LRFN3
RAD23A
PRR14
FBRS
SPDL1
ARFGAP3
DYRK1B
MRS2
PBLD
HNRNPH3
CCDC106
TBC1D5
TMEM209
SSMEM1
RNF149
SLC39A7
RXRB
RING1
HSD17B8
SHBG
FXR2
C6orf136
CDC34
USP10
STS
PUDP
GPS2
EIF5A
WDR13
EPS15L1
U2AF2
XPO7
DOK2
PDXDC1
UBE2M
CHMP2A
PAPSS1
TMEM70
ELOC
IPMK
CISD1
NDUFA8
MORN5
RBAK-RBAKDN
RBAK
ZMYM4
HSF1
BOP1
C8orf48
COL11A2
SRD5A1
NSUN2
CDC20
ESRRA
CATSPERZ
WDR18
PRELID3B
USO1
TMEM104
NAT9
SMARCC1
TASOR2
SS18L2
SEC22C
ARPC2
ZNF638
PALB2
DCTN5
CC2D1A
C19orf57
ZNF664-RFLNA
ZNF664
CCDC92
TIGD1
EIF4E2
HINFP
RSL1D1
SYS1
SUPT5H
RPS16
MTG1
MYL5
ATP5ME
TMEM63B
MRPL14
SCAF11
KIFAP3
TFB2M
CNST
THAP11
UROS
BCCIP
MORF4L1
MKNK2
TMEM43
CHCHD4
SLC25A11
RNF167
PFN1
UTP18
MBTD1
TIGD6
HMGXB3
TRIP6
SRRT
GZF1
KCNN1
MINK1
TMEM63A
LEFTY1
ZNF34
RPL8
CCDC93
AURKB
PPP2R3B
CYCS
C15orf40
ZBTB45
C5orf24
STYXL1
MDH2
GP1BA
SRCAP
LOC730183
MPC2
MAPKAP1
DCAF6
WDR43
TMEM109
PRPF19
CDC5L
TENT4A
GID8
DIDO1
DFFB
CEP104
POLR2J2
DSN1
POP7
EID1
ING1
CARS2
DLGAP4
ZNF517
NUDCD2
HMMR
NBPF3
TOPORS
SMIM27
NUDT1
MRNIP
MRM2
GOLGA1
SPDYE16
ALG8
HBS1L
GABARAP
TIA1
PCYOX1
POLR2J
TMED9
B4GALT7
SCAND1
PARP6
PUM2
SKA3
MRPL57
BORCS6
AURKAIP1
FIP1L1
FZR1
DOHH
PUF60
CIAO3
MAPKAPK5
CBWD5
PRDM4
PIAS4
NR1D1
PPAN-P2RY11
PPAN
ANGPTL6
CPLANE2
CBWD3
TFAP2A
C6orf89
TMX1
ENDOV
MBD1
CXXC1
PTBP1
TSEN2
ZZZ3
MAD1L1
PHF23
DVL2
AHCTF1
LINS1
ASB7
RPL10A
MAP3K7CL
CCT8
RFX1
UCN2
PFKFB4
TLX2
PCGF1
LBX2
UPF1
ZNF286A
CLPTM1L
MRPL21
IGHMBP2
B9D1
ZBTB14
COPB2
CBWD6
WWP1
RPS29
WRNIP1
MYLK4
NOP16
HIGD2A
GPBP1
RPS11
RPL13A
ZBTB2
TIPIN
MIDN
CBARP
ATP5F1D
CFAP410
RPS19
MARCHF7
IPO11
DIMT1
NAPB
RPRD2
TSACC
CCT3
TAOK1
TTC32
RNF32
MAK16
ATXN7L2
POFUT2
ATAD3A
WWOX
ZNF48
ZNF248
PCBP1
AMACR
ARHGAP35
AP2S1
KIF22
COASY
SLC15A4
C11orf80
PRKDC
MCM4
ANO10
ABHD5
TAS1R1
NOL9
NFXL1
SBNO1
NOP14
GRK4
C8orf37
PTPN21
ARF4
STX1A
BTBD10
ZFP91
LPXN
IQCC
DCDC2B
CCDC28B
TRAPPC9
TSSC4
VARS2
GTF2H4
PPP4R3B
DNMT1
PRPF39
CNOT4
SIRT5
PGRMC2
UIMC1
KAZALD1
E4F1
ZNF692
CCNC
MLX
HSPA4
ZNF296
GEMIN7
ZC3H14
CAPN7
POLRMT
FGF22
GPAA1
EXOSC4
TMEM18
ATP5PO
VPS13C
C2CD4A
PAOX
METTL22
ECHS1
TMCO1
EIF2S2
ABHD10
KDM3A
SPEN
DHX9
CENPS-CORT
CENPS
CCSER2
RPL27A
SLC25A10
MRPL12
LHX9
C1orf53
RAD23B
NRF1
EIF2S1
COQ9
CIAPIN1
ATP6V1D
SF3A3
TUBGCP5
INO80C
SREBF1
ATP5MC2
SRSF11
DCP1A
PPA1
RPL12
LRSAM1
UQCR11
VMP1
PTRH2
SNX5
MGME1
TDG
C12orf73
EHD1
ZNF182
SPACA5B
SPACA5
ZNF329
TMED3
COPS3
SMG7
SPG7
RBM39
NAT10
ELP6
VMAC
NDUFA11
ICMT
HES3
LSM12
G6PC3
TIGD5
EEF1D
SLC30A5
XPC
LSM3
CD320
E2F6
ZNF652
NAA35
RPS6
CSNK1A1
TMX3
CCDC102B
MOCS2
DNAJC27
LTV1
NOL11
HSD17B1
PAPOLA
CLIP4
NAA38
THAP12
GVQW3
UBE2D3
ZDHHC12
CST6
TMEM120B
YIPF2
TIMM29
HEXIM1
UBR3
METTL5
ZNF771
RFC5
SPECC1L
CEP350
TAOK2
SEH1L
MATR3
QRICH1
DHX34
C5AR2
MTHFD1
SPAST
DLD
EIF1AD
BANF1
WDR73
NMB
PLEKHA8
FKBP14
NUP62
IL4I1
ATF5
KCTD13
ERGIC2
RPS28
NDUFA7
KATNIP
GTF3C1
ZNF473
VRK3
AKAP11
TRAPPC2
OFD1
UHRF2
CARNMT1
SNX25
CFAP97
MRTFB
GPATCH3
ANKFY1
TRAM1
PURA
ARF3
ASXL1
AP5S1
PCIF1
CNP
RAB33B
TMEM88
CYB5D1
SH3GL1
CHAF1A
CBLL1
RNF130
MSRA
FITM2
SCAMP5
SF1
UBL4A
NKTR
TBCCD1
DNAJB11
BRD2
ZBTB21
PGAM1
MED1
CDK12
PPP1R11
POLR1H
CSDE1
RFXANK
BORCS8-MEF2B
BORCS8
S100A13
ZSCAN22
CAND1
SMIM10L1
PRH1-TAS2R14
PRH1
FKBP1A
ACAD9
PIGF
CRIPT
LAGE3
LIG4
ABHD13
MRRF
SHFL
DUS2
DPEP2NB
DDX28
RPL17-C18orf32
RPL17
C18orf32
NCOA4
ERCC6
CEP20
PTTG1IP
UGGT2
ARMC2
FSIP1
ZNF526
SCML1
LRPAP1
MYO9B
HAUS8
PSMA2
ASCC1
ANAPC16
PDCL3
EXOSC10
ZMYM1
PRDX1
APC
MARS2
APTX
GAS8
DBNDD1
SRA1
SLC35A4
APBB3