ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2188673 | TC-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◣ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

ANKRD26
SPRTN
EXOC8
N6AMT1
ADI1
RAB35
PHF12
STK32C
LRRC27
SUGP2
ARMC6
SMARCA4
POU2F1
FAM222B
NBEAL2
CCDC12
BNIP3
C19orf81
PGP
BRICD5
CASKIN1
ACTN4
ENTPD6
ATP6V0E2
DNAJA3
CORO7-PAM16
CORO7
NBPF1
TOLLIP
XRCC5
RAD21
CXorf38
C10orf88
PRMT2
ZC3H8
SDHA
CCDC127
IFNAR1
FAM220A
SAMHD1
SMIM11B
SMIM11A
VDAC3
APOLD1
PRRT2
PAGR1
MAZ
MVP
NDEL1
EHMT1
PPP6R1
SAYSD1
ITPA
DDRGK1
POLA2
SPPL2B
LSM7
CHMP7
VPS26B
NCAPD3
RANBP3
SNAP47
JMJD4
KHDRBS1
CRTC1
RABIF
TMEM141
CCDC183
MCRS1
TUBD1
RPS6KB1
USP21
PPOX
UFC1
PRR30
PREB
CBX5
HNRNPA1
FAM24B
XRCC2
FAM71E1
EMC10
TMEM143
SYNGR4
TK2
CKLF-CMTM1
CKLF
CENPBD1
MYPOP
FAM122A
RBM17
LONP1
CATSPERD
ZBTB17
RAX2
MRPL54
APBA3
CDC7
C8orf48
FAM98A
ZNF12
ALKBH5
ABCF3
KCNN1
TMEM250
DAGLB
HNRNPL
SLX4
EEF1AKMT1
ABCA3
GTF3A
SRSF10
HNRNPH1
TMED4
DDX56
ZNF583
TMEM63A
LEFTY1
PTK2
SLC2A11
PATL1
NPRL3
XPO7
DOK2
PDRG1
EID2B
EID2
MOK
RCBTB2
FAM120B
MIS18A
LOC100287896
LIPT2
YEATS4
HP1BP3
SH3YL1
ACP1
LYRM7
HINT1
RPP38
ACBD7
USP10
FXYD3
NELFCD
VPS13A
PPP1CB
CDC34
XPO5
POLH
CHD1
SELENOI
ADGRF3
MRPL55
COP1
TMEM139
CASP2
LUC7L2
FMC1-LUC7L2
FMC1
MTHFSD
UAP1L1
MAN1B1
AP3B1
SOD2
ACAT2
KDM8
SMG9
RNF32
THAP7
PRR14
FBRS
WIPI2
MRPL45
NAGK
SUMF2
RPL36
MICOS13
HSD11B1L
PPP2CA
HSF1
BOP1
DPF2
CAPZA2
GPI
ARFGAP3
CC2D1A
C19orf57
RAB18
CCNQ
MAP2K7
SAFB
SAFB2
POLR2J3
STS
PUDP
RALGAPB
UNG
ALKBH2
INTS7
DTL
ARPC2
C6orf136
C1orf74
TOMM20
TAX1BP3
EMC6
NAPG
WWP2
NOB1
INTS13
FGFR1OP2
SCGB1C2
SCGB1C1
ODF3
BANP
DYNC2I1
UPF1
PITPNB
FADD
MIDN
CBARP
ATP5F1D
MORF4L1
EPS15L1
SARS1
RTL10
GNB1L
SPDYE6
LOC100289561
TMEM70
ELOC
POFUT2
OSCAR
NDUFA3
DCAF8
SHBG
FXR2
GET1
SPOP
AURKB
BORCS6
TMEM63B
MRPL14
PDXDC1
ARMC2
THOC3
KIFAP3
ALG8
CRB1
ZNF692
CBY3
GATD3B
GATD3A
ZNF664-RFLNA
ZNF664
CCDC92
MTCH2
RNF130
NBPF3
DYRK1B
GSX2
ESRRA
CATSPERZ
NDUFA8
MORN5
ZMYM4
C11orf80
RBAK-RBAKDN
RBAK
AMZ2
WDR18
CCDC93
MRFAP1L1
BLOC1S4
GMCL1
HSD17B10
TRMO
GOLGA1
NUP62
IL4I1
ATF5
CALR
RAD23A
PTTG1IP
LIG4
ABHD13
POLR2J2
CNOT4
UQCR11
ZNF638
OARD1
NFYA
DFFB
CEP104
MKNK2
MAP1LC3B
FBXO31
LRPAP1
SPDYE7P
POM121
TDP2
ACOT13
POLRMT
FGF22
MSL2
HASPIN
SNRNP70
TIGD5
EEF1D
CLN8
FUT8
CCSER2
RPRD2
MINK1
PTBP1
THOP1
SGTA
CACYBP
THAP5
DNAJB9
TMED3
DHDDS
MRS2
UBE2M
CHMP2A
MTG1
PPME1
C2CD3
CCDC106
U2AF2
HINFP
MRPL24
HDGF
ZNF652
CPLANE2
METTL22
MAPKAP1
ATG16L2
ING1
CARS2
TMEM109
PRPF19
MRNIP
TFB2M
CNST
RNF149
TCTEX1D2
PRELID3B
LHX9
C1orf53
POMT1
VPS13C
C2CD4A
MOCS2
WWP1
DUX4
KATNIP
GTF3C1
PAXIP1
TMEM104
NAT9
PALB2
DCTN5
TMEM211
MSRA
ZNF473
VRK3
ASCC1
ANAPC16
SPEN
DHX9
DTX2
FIP1L1
EID1
MARS2
MMAA
SMARCC1
ZNF329
ZDHHC12
TRAM1
TIGD1
EIF4E2
LRFN3
UBL4A
LAGE3
HBS1L
B9D1
GRB2
RRP1
WDR4
SDCBP
SRRM1
SSH1
UROS
BCCIP
PARK7
PAPSS1
USO1
SPECC1L
ECM1
POLR2J
PIAS4
NADK
SMIM14
TOPORS
SMIM27
SLC30A5
YY1AP1
DAP3
TBC1D5
MYCBP2
ZNF34
RPL8
ZNF517
CAPN7
RAD23B
SPG7
CD320
CDC20
MYL5
ATP5ME
TSACC
CCT3
NUP50
PUM2
TIGD6
HMGXB3
AMACR
PRDM4
ZNF526
UPF2
SEC16A
C9orf163
WDR43
PAFAH1B1
ZBTB14
PUSL1
ACAP3
MAMSTR
UCN2
PFKFB4
CFAP410
GFPT1
CTBP1
NANP
DLGAP4
SPDYE16
CENPS-CORT
CENPS
IQCC
DCDC2B
CCDC28B
GOPC
PINK1
PPP2R3B
TBC1D32
EIF2D
ALAS1
SDF4
B3GALT6
IPMK
CISD1
C8orf37
TMEM120B
GAA
PKD2L2
MPC2
DCAF6
FZR1
DOHH
VARS2
GTF2H4
TCF25
PPAN-P2RY11
PPAN
ANGPTL6
STX1A
NRF1
SHFL
TLX2
PCGF1
LBX2
THAP12
GVQW3
SNRPB2
DNAJC28
FLYWCH2
DCTN6
SYS1
CLIP4
SPDYE14
SPDYE10P
CASTOR2
DSN1
CEP20
GDF5
CEP250
PPFIA3
C19orf73
TMX3
CCDC102B
SCAPER
NFXL1
GPAA1
EXOSC4
RFX1
ATP5PO
BSN
SNRK
PTPN21
ZC3H14
KCTD13
GZF1
MRTFB
KDM3A
PHF14
RFXANK
BORCS8-MEF2B
BORCS8
FAM227A
CBY1
MEAF6
SOS1
LRRC42
ZHX3
PGAM1
SIN3B
GABARAP
PHF23
DVL2
ABCB10
PARD6A
C16orf86
ACD
ENDOG
SRSF1
CCDC150
AKAP8
NAPB
PIGX
CEP19
HDLBP
SEPTIN2
RUSC1
ZNF576
IRGQ
NUP107
IBA57
ZMYM1
TCTA
RHOA
STX2
TMEM43
CHCHD4
TTC37
ARSK
SPAST
ABRAXAS1
NSMCE3
DOLPP1
UGGT2
TMEM170B
RDM1
FAM200B
WDR13
STIM2
ARF4
SREBF1
CC2D1B
PTPN4
E2F6
SNAPC2
CTXN1
PMF1-BGLAP
PMF1
SCAF11
GNPTAB
FAM234B
SPATA4
ARHGAP35
AP2S1
GPS2
EIF5A
RAB1A
SPATS2
SMYD3
IFT172
GCKR
FNDC4
ZNF281
DHX34
C5AR2
CANT1
UBN2
ASNSD1
ASDURF
ANGEL2
PPP5C
ZNF768
ZNF747
ARF1
RNF38
SLC35B3
ANO10
ABHD5
SPATA20
EPN3
DAW1
TBK1
CCNI
MED4
TRIM37
TFAP2A
DLD
ATP6V1C1
HERC4
DPYSL2
TOR1AIP2
TOR1AIP1
WRNIP1
MYLK4
C17orf97
PLA2G12A
LRBA
CDC42EP4
PAM16
SPC24
ADAM10
RAB4A
PCIF1
KANK1
OPA1
ZSCAN5A
RBBP7
SCML1
CLN5
STXBP1
KCNC3
PARP6
LPCAT3
TBC1D7-LOC100130357
TBC1D7
TAS1R3
INTS11
CPTP
MAST2
CYRIB
PMS1
ORMDL1
KIF6
CLPTM1L
ABHD10
AP1G2
TMEM175
GAK
DHRS7B
TSPAN10
NPLOC4
ZNF497
A1BG
C15orf40
ELP6
ZFP69B
DNM3
QTRT1
SIRT6
ANKRD24
VPS28
AUH
MRPS18C
HELQ
PIGF
CRIPT
STX12
ABCA7
NAXE
GPATCH4
MCPH1
TRAPPC5
MCEMP1
URGCP
UBE2D4
MAP2K2
TASOR2
SELENOT
CCDC200
CYCS
PAIP2
GRIN1
PPP1R27
MCRIP1
CSNK1A1
POLR3H
ROPN1L
ZNF554
ZNF471
TSEN2
NUDCD2
HMMR
HGH1
MROH1
MRPL35
IMMT
IQCE
MBD3
RELA
NBPF15
RSL1D1
ARRDC3
VPS72
PIP5K1A
SMG6
SRR
PDCD6IP
ERICH2
NDUFA6
NDUFA12
HDHD3
RBM7
C11orf71
ZMYND12
PPCS
CCDC30
SUCLA2
YIPF2
TIMM29
TIMM13
STARD6
C18orf54
TSPYL5
TMED9
B4GALT7
NR1D1
ERGIC3
PARN
BFAR
PVR
MLH3
NF1
ZNF800
DNMT1
INO80C
MKNK1
MTRNR2L8
COQ3
PDCD2L
ARHGAP45
S100A13
S100A1
CHTOP
FBXO46
CCDC130
ZNF182
SPACA5B
SPACA5
IRF2BP2
SEC14L1
SRPRB
SEC24D
PRPF39
EIF2S2
BRD2
FBXO5
MIB2
SLC39A7
RXRB
RING1
HSD17B8
COL11A2
UBE2J2
SCNN1D
TSSC4
EIF2S1
ATP6V1D
MYCBP
GJA9
B3GALNT2
HEXIM1
BTF3
PER1
LHPP
PITHD1
ZNF248
PPA1
APC
AIP
PTPN2
FBXO42
ASXL2
SNURF
SNRPN
RAB23
PAPOLA
ATP6V1G1
TNKS2
SESN1
CEP57L1
MBD6
DDIT3
TMEM182
SIRT5
CEP295
SLC23A3
RETREG2
CNPPD1
OCIAD1
SDCCAG8
CEP170
MTFMT
ENDOV
TAOK2
P3H1
RNF19B
WRN
PURG
RGL1
ARPC5
USP37
CNOT9
CCT5
ATPSCKMT
UBE2T
PPP1R12B
TRNAU1AP
SMAD4
DOCK3
TIA1
PCYOX1
APTX
PRRT3
COG6
DNAJA1
TRAPPC9
TRIT1
ZDHHC16
EXOSC1
SAP30
LRRC63
STAT1
RIOK2
FAM104A
C17orf80
UIMC1
TRIM46
KRTCAP2
ZNF106
SNAP23
MTRNR2L2
MSH3
DHFR
ERCC6
CLASP1
SPATA1
GNG5
CDC42BPB
SBF2
SBNO1
PDIA5
FLYWCH1
UTP18
MBTD1
EIF4G1
CFDP1
EXOSC5
BCKDHA
RBM12B
SPDL1
KDM2A
CCS
CCDC87
SMAP2
ILRUN
AKAP1
PDCL3
C2orf74
TTC30A
TUBG2
LYPLA1
CYTH1
UBE2V1
STX8
CFAP52
USP28
TRIAP1
COX6A1
TMX1
PGRMC2
DNAJB12
ARHGAP39
TRAF3IP1
CDT1
APRT
HSDL2
KCNAB3
CNTROB
TRAM1L1
ANAPC11
ALYREF
ERI1
STXBP5
SLTM
ELOF1
SPRYD7
SNX12
TMEM209
SSMEM1
MPHOSPH6
RPP14
HTD2
PLS1
LRCH3
IPO9
GNPDA2
TSR3
GNPTG
ZNF559-ZNF177
ZNF559
MRI1
C19orf53
WDR74
STX5
ZBTB45
TRIM28
SLC39A10
GSTT4
CABIN1
TYMP
ODF3B
SCO2
HSP90AA1
ZSCAN32
ZNF174
SPRY4
GPBP1
GPATCH8
BORCS7
ICMT
HES3
FKBP1A
BCL10
PDCD5
CIAO3
ZP3
FBXO48
APLF
SVBP
ERMAP
MYOZ3
RAB33B
PATZ1
NAPSA
TBCCD1
DNAJB11
MRPL17
ZNF787
NAA50
ATP6V1A
CDC42
IDE
SPTBN4
ZNF667
NDUFB7
PPAT
PAICS
FIS1
CEP63
ANAPC13
JAM3
CNP
SYMPK
FOXA3
MAP2
SRD5A1
NSUN2
XRCC1
PINLYP
GFOD2
CREM
ASH1L
HEATR5B
GPATCH11
AP1M1
CTPS1
CBFB
KDM4C
ING2
SEC61A2
ZC3H15
CC2D2B
RTN3
ATL3
AGFG2
KBTBD11
FARSB
TMEM69
GPBP1L1
KANSL1
CCDC125
PSMA2
MAP4K1