ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2188684 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◣ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

ADI1
ANKRD26
STK32C
LRRC27
PHF12
SPRTN
EXOC8
NBEAL2
CCDC12
RAB35
SMARCA4
SUGP2
ARMC6
N6AMT1
FAM222B
PGP
BRICD5
CASKIN1
ENTPD6
BNIP3
POU2F1
C10orf88
DNAJA3
CORO7-PAM16
CORO7
VPS26B
NCAPD3
XRCC5
EID2B
EID2
FAM220A
PRMT2
PRRT2
PAGR1
MAZ
MVP
SAMHD1
ACTN4
ATP6V0E2
NDEL1
TK2
CKLF-CMTM1
CKLF
TOLLIP
MCRS1
CBX5
HNRNPA1
KHDRBS1
ZBTB17
MTRNR2L8
GTF3A
LONP1
CATSPERD
RCBTB2
APOLD1
CRTC1
NBPF1
TUBD1
RPS6KB1
NPRL3
CENPBD1
SDHA
CCDC127
TMEM143
SYNGR4
SPPL2B
LSM7
VDAC3
ITPA
DDRGK1
SAYSD1
TMEM141
CCDC183
MTRNR2L2
MSH3
DHFR
EEF1AKMT1
FXYD3
KDM8
PRR30
PREB
PRR14
FBRS
DAGLB
OSCAR
NDUFA3
EHMT1
HNRNPL
IFNAR1
DUX4
CBY3
MIS18A
SUMF2
C6orf136
FAM24B
RANBP3
FAM122A
RAD21
MOK
NAGK
PITPNB
CHMP7
HNRNPH1
RAB18
FAM98A
SPOP
POLR2J2
GATD3B
GATD3A
PPP2CA
NELFCD
CXorf38
PATL1
SMIM11B
SMIM11A
THAP7
USP10
RBM17
TMEM139
CASP2
CDC34
SHBG
FXR2
RAX2
MRPL54
APBA3
HP1BP3
SRSF10
WIPI2
LUC7L2
FMC1-LUC7L2
FMC1
PDRG1
DPF2
XRCC2
CDC7
SOD2
ACAT2
ZNF583
POLRMT
FGF22
TMEM250
ARFGAP3
FAM71E1
EMC10
UBE2M
CHMP2A
SELENOI
ADGRF3
DLGAP4
PTK2
TMEM63B
MRPL14
MYPOP
SLC2A11
PDXDC1
KCNN1
ZC3H8
AMZ2
SARS1
POLR2J
MRFAP1L1
BLOC1S4
CHD1
MAP2K7
ZMYM4
MRPL45
NDUFA8
MORN5
ALKBH5
LOC100287896
LIPT2
PALB2
DCTN5
SAFB
SAFB2
DYNC2I1
WWP2
NOB1
ZNF12
SLX4
OARD1
NFYA
GMCL1
STX1A
XPO5
POLH
HEXIM1
SMG9
CAPZA2
RPL36
MICOS13
HSD11B1L
NUDCD2
HMMR
TOPORS
SMIM27
HASPIN
LRPAP1
CCNQ
C8orf48
WDR4
POLA2
MTCH2
TAX1BP3
EMC6
RABIF
FUT8
PTTG1IP
CYTH1
ESRRA
CATSPERZ
HINFP
CNOT4
SPDYE6
LOC100289561
NUP50
AP3B1
KCTD13
YEATS4
THAP5
DNAJB9
SNAP47
JMJD4
POLR2J3
MAPKAP1
USF2
RNF32
CCSER2
USO1
IQCC
DCDC2B
CCDC28B
PMF1-BGLAP
PMF1
UPF1
GSX2
CLIP4
MAMSTR
NANP
MSL2
SLC30A4
DCAF8
CLN8
BANP
RRP1
PPME1
C2CD3
RGPD2
RGPD1
CALR
RAD23A
DFFB
CEP104
LIG4
ABHD13
SMIM14
CC2D1A
C19orf57
PPP6R1
ABCF3
ZBTB14
FAM120B
SCAF11
METTL22
MTHFSD
UAP1L1
MAN1B1
ABCA3
MAP1LC3B
FBXO31
PAPOLA
TIGD6
HMGXB3
RNF149
GPI
TMEM63A
LEFTY1
PIAS4
SH3YL1
ACP1
GNPTAB
RPP38
ACBD7
ZNF768
ZNF747
RALGAPB
NUP107
GZF1
CEP20
DNMT1
SREBF1
LYRM7
HINT1
SRSF1
TMED4
DDX56
TDP2
ACOT13
WRNIP1
MYLK4
ZMYM1
COL23A1
FAM200B
KDM3A
TDRD7
RTL10
GNB1L
ENDOV
MBD1
CXXC1
FADD
DHDDS
VPS13A
ASNSD1
ASDURF
LINS1
ASB7
SBNO1
STS
PUDP
TMEM104
NAT9
ZNF576
IRGQ
SRD5A1
NSUN2
MIDN
CBARP
ATP5F1D
ROPN1L
STX8
CFAP52
UGGT2
ZNF248
POFUT2
ZNF652
SELENOT
UROS
BCCIP
GOPC
INTS13
FGFR1OP2
NAPB
ARPC2
DTX2
SNRNP70
TMEM70
ELOC
FZR1
DOHH
IPMK
CISD1
COQ3
LRFN3
MKNK2
UIMC1
SPECC1L
APC
EID1
INTS7
DTL
ZNF473
VRK3
PINK1
FRG2C
BCAT1
CCT5
ATPSCKMT
CRB1
NUP62
IL4I1
ATF5
PCIF1
AURKB
CCDC106
U2AF2
MINK1
SPDYE14
SPDYE10P
TRMO
MRS2
TENT4A
WWP1
TAOK2
PVR
FRG2
GABARAP
PHF23
DVL2
SSH1
BSN
SMARCC1
MORF4L1
UBL4A
LAGE3
TBC1D7-LOC100130357
TBC1D7
MPHOSPH6
CTBP1
RELA
USP21
PPOX
UFC1
GDF5
CEP250
PUSL1
ACAP3
SCAPER
HBS1L
TFAP2A
ANO10
ABHD5
GOLGA1
ZNF526
CASTOR2
TIA1
PCYOX1
TMEM120B
GPATCH8
ADAM10
PUM2
INTU
PLEKHA8
FKBP14
MRPL55
SIN3B
TRIM39-RPP21
TRIM39
CDC42BPB
KIFAP3
SCML1
SEC16A
C9orf163
THOC3
PRELID3B
MTG1
PPA1
TCF25
DYRK1B
WDR18
ARMC2
PPAN-P2RY11
PPAN
ANGPTL6
SPEN
SHFL
VARS2
GTF2H4
KATNIP
GTF3C1
PPP1CB
PAPSS1
ERCC6
P3H1
TMEM109
PRPF19
RFXANK
BORCS8-MEF2B
BORCS8
CENPS-CORT
CENPS
KIF6
EPS15L1
TASOR2
UPF2
RBBP7
TCTA
RHOA
ALG8
E4F1
SEH1L
C8orf37
MAGI1
TRIAP1
COX6A1
OPA1
MYL5
ATP5ME
UTP18
MBTD1
NFXL1
GET1
SPATA20
EPN3
TRAM1L1
TFB2M
CNST
ZFAND3
PIGX
CEP19
NF1
SPATA4
GRB2
XPO7
DOK2
ZNF329
MBD3
GAA
SLC39A10
FKBP1A
WDR13
TRAM1
ZDHHC16
EXOSC1
ZNF667
ING1
CARS2
NADK
NDUFS6
MRPL36
SHC2
C1orf74
TRIM37
CIPC
FBXO48
APLF
KLHL22
TIGD1
EIF4E2
PRPF39
C11orf80
TERF2IP
KARS1
COP1
NAPG
HSF1
BOP1
MFSD4B
CCDC130
C15orf40
CAPN7
DHX34
C5AR2
CCDC150
BIRC6
SNURF
SNRPN
TMEM182
ZNF664-RFLNA
ZNF664
CCDC92
CCDC93
ZHX3
RAB1A
CDC42EP4
SOS1
HSP90AA1
SLC30A5
DNAJC28
C17orf97
WDR5B
PAXIP1
PTBP1
BCAR1
FAM227A
CBY1
SLC35B3
LRBA
KANK1
MRNIP
MARS2
SMAP2
URGCP
UBE2D4
MRPL24
HDGF
SRRM1
ZNF638
PRDM4
ALAS1
CCDC200
TBC1D32
NR1D1
THOP1
SGTA
C19orf81
MRPS18C
HELQ
MAP2K2
PTPN4
NPM1
SSNA1
ANAPC2
CACYBP
LAMP1
TOMM20
CCDC86
EIF2D
AKAP1
NME1
RPS2
RNF151
TRMT61B
TOR1AIP2
TOR1AIP1
SPDYE7P
POM121
SLC35E2A
NOC4L
DDX51
PARK7
TBL3
GPAM
UNG
ALKBH2
SPDL1
SLC35E2B
PBLD
HNRNPH3
TBC1D5
TMEM209
SSMEM1
MAMDC2
SLC39A7
RXRB
RING1
HSD17B8
GPS2
EIF5A
NUP214
WDR74
STX5
RBAK-RBAKDN
RBAK
COL11A2
CDC20
NOXO1
CWC25
RBM42
SS18L2
SEC22C
UTP25
PEMT
MAGOHB
RSL1D1
SYS1
SUPT5H
RPS16
DENR
ERCC6L2
THAP11
TMEM43
CHCHD4
SLC25A11
RNF167
PFN1
TRIP6
SRRT
ZNF34
RPL8
RPS7
PPP2R3B
CYCS
ZBTB45
C5orf24
STYXL1
MDH2
GP1BA
SRCAP
LOC730183
MPC2
DCAF6
HAUS5
WDR43
CDC5L
GID8
DIDO1
DSN1
POP7
ZNF517
MRM3
GLOD4
NBPF3
NUDT1
MRM2
SPDYE16
TMED9
B4GALT7
SCAND1
PARP6
NUF2
SKA3
MRPL57
BORCS6
AURKAIP1
DRG2
FIP1L1
PUF60
JOSD2
ASPDH
CIAO3
GTF2H3
EIF2B1
MAPKAPK5
CBWD5
CPLANE2
CBWD3
C6orf89
TMX1
MTRNR2L9
TSEN2
ZZZ3
MAD1L1
AHCTF1
RPL10A
MAP3K7CL
CCT8
LANCL2
RFX1
UCN2
PFKFB4
TLX2
PCGF1
LBX2
ZNF286A
CLPTM1L
MRPL21
IGHMBP2
B9D1
STXBP4
COX11
COPB2
CBWD6
AASDH
RPS29
NOP16
HIGD2A
GPBP1
RPS11
RPL13A
ZBTB2
TIPIN
KIF5C
CFAP410
RPS19
MARCHF7
IPO11
DIMT1
RPRD2
FAF1
CDKN2C
TSACC
CCT3
TAOK1
TTC32
MAK16
ATXN7L2
ATAD3A
WWOX
ZNF48
PCBP1
AMACR
ARHGAP35
AP2S1
KIF22
COASY
SLC15A4
PRKDC
MCM4
TAS1R1
NOL9
NOP14
GRK4
PTPN21
NUP153
ARF4
PEX12
AP2B1
PHF7
BAP1
BTBD10
ZFP91
LPXN
TRAPPC9
TSSC4
PPP4R3B
PSMB2
TMEM79
SMG5
SIRT5
PGRMC2
KAZALD1
ZNF692
CCNC
MLX
HSPA4
ZNF296
GEMIN7
ZC3H14
ADPGK
GPAA1
EXOSC4
TMEM18
ATP5PO
VPS13C
C2CD4A
PAOX
ECHS1
TMCO1
EIF2S2
ABHD10
DHX9
RBBP5
RPL27A
SLC25A10
MRPL12
LHX9
C1orf53
RAD23B
NRF1
EIF2S1
COQ9
CIAPIN1
ATP6V1D
SF3A3
TUBGCP5
INO80C
ATP5MC2
SRSF11
DCP1A
RPL12
LRSAM1
UQCR11
VMP1
PTRH2
SNX5
MGME1
TDG
C12orf73
EHD1
ZNF182
SPACA5B
SPACA5
TMED3
COPS3
SMG7
SPG7
RBM39
NAT10
ELP6
VMAC
NDUFA11
ICMT
HES3
LSM12
G6PC3
TIGD5
EEF1D
XPC
LSM3
CD320
E2F6
NAA35
RPS6
CSNK1A1
TMX3
CCDC102B
MOCS2
DNAJC27
LTV1
NOL11
HSD17B1
NAA38
THAP12
GVQW3
UBE2D3
ZDHHC12
CST6
MED9
YIPF2
TIMM29
UBR3
METTL5
ZNF771
RFC5
CEP350
MATR3
QRICH1
MTHFD1
SPAST
DLD
EIF1AD
BANF1
WDR73
NMB
ERGIC2
RPS28
NDUFA7
AKAP11
TRAPPC2
OFD1
UHRF2
CARNMT1
SNX25
CFAP97
MRTFB
GPATCH3
ANKFY1
PURA
ARF3
ASXL1
AP5S1
CNP
RAB33B
TMEM88
CYB5D1
SH3GL1
CHAF1A
CBLL1
RNF130
MSRA
FITM2
SCAMP5
SF1
UNC45B
NLE1
NKTR
TBCCD1
DNAJB11
BRD2
ZBTB21
PGAM1
MED1
CDK12
PPP1R11
POLR1H
CSDE1
S100A13
ZSCAN22
CAND1
SMIM10L1
PRH1-TAS2R14
PRH1
ACAD9
PIGF
CRIPT
MRRF
DUS2
DPEP2NB
DDX28
RPL17-C18orf32
RPL17
C18orf32
NCOA4
FSIP1
MYO9B
HAUS8
PSMA2
ASCC1
ANAPC16
PDCL3
EXOSC10
PRDX1
APTX
GAS8
DBNDD1
FANCD2
SRA1
SLC35A4
APBB3
PPP5C
S100A1
CHTOP
LSG1
EED
TAB3
TAF12
CLN5
SPRYD4
SNRPB2
CC2D1B
ATF2
ETFA
BTF3
TSPAN10
NPLOC4
TBK1
EIF4A3
DMAP1
CCNI
EIF5
SEC14L1
THADA
UQCC1
TTLL9
DUSP15
TMEM101
MAP3K7
COX18
PDCD6IP
ATP6V1C1
GFPT1
STX16
POLD1
NR1H2
DBR1
YIPF3
POLR1C
LRRC73