ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025672 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◣ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MTRNR2L2
MSH3
DHFR
DUX4
PMF1-BGLAP
PMF1
MTRNR2L8
MTRNR2L9
GPAM
PEMT
NME1
DRG2
SNX25
CFAP97
MED9
SSNA1
ANAPC2
SLC35E2B
KIF5C
SLC35E2A
DUS1L
PHF7
BAP1
FAF1
CDKN2C
ZSWIM7
TTC19
TDG
C12orf73
NDUFS7
LAMP1
ZNF296
GEMIN7
RRP1
PCBP1
ATP6V0C
AMDHD2
TRIAP1
COX6A1
MRPL21
IGHMBP2
CCDC86
NME2
HEXA
PKN2
NOP56
WASHC2C
CIAO3
UTP25
TMEM222
GGCX
POLR1F
CNOT6
COPS3
COMMD1
CCT4
EPRS1
UNC45B
NLE1
FLCN
AKAP10
HAUS5
GTF2H3
EIF2B1
RGPD2
RGPD1
ZMPSTE24
SLC39A3
WASHC2A
PMP22
ANKRD40
PCID2
CUL4A
RPLP0
GCN1
ADORA2B
RPS2
RNF151
TBL3
NOXO1
ITGB3BP
EFCAB7
DLST
TRMT61B
MAGOH
GET4
DENR
SRRD
HPS4
RBM42
TVP23B
SPRYD4
ABT1
ARSG
SLC16A6
ADPGK
RBBP5
EIF2D
JOSD2
ASPDH
ATXN1L
PIGL
NCOR1
RASD1
LSM12
G6PC3
RLF
FBXW8
MARCHF8
RNF166
CTU2
FRA10AC1
PRKAR1B
EED
CCNL1
COL23A1
TACO1
MPHOSPH10
MCEE
DPH5
MPRIP
GARS1
RAD54L2
THAP9
SEC31A
LANCL2
C8orf33
BAX
MRPL15
OTUD7B
CWC25
SUPT5H
RPS16
MRPL44
CENPV
NOXA1
TMED9
B4GALT7
LRRC37A3
SNRPD1
FAM227B
DTWD1
GID4
ATPAF2
PURB
MANBAL
DHX33
MTF2
NT5M
CLN6
PBX2
GPSM3
ACSF3
SF3A3
SLC39A4
CPSF1
IARS1
RANBP2
OR6B2
NDUFA10
LRRC59
NOP9
DHRS1
TOP3B
TTC4
PLEKHM3
AKIRIN1
MDN1
DPY19L4
ZNF770
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MRPS16
DNAJC9
COX10
NUP54
RBM39
GTF2H2C
GTF2H2C_2
MRPL16
C2CD2
PLD6
CCDC57
TVP23C
PEX3
ADAT2
GNPDA1
FKTN
GLRX5
MNT
RPL6
PTPN11
MAGOHB
NUF2
TSR3
GNPTG
TMEM41A
YBX1
MRPL3
SUPV3L1
AHCY
DDX1
UBB
HS3ST3B1
C1orf74
MRPS18C
HELQ
SLC31A1
FKBP15
ZSCAN22
TBC1D13
UBA1
CYCS
BTBD10
NMNAT1
LZIC
DGKZ
DCAF8
PMS2
AIMP2
POR
SRM
MYO9B
HAUS8
SLC25A33
UTP4
DERPC
CHTF8
PSMF1
PINX1
SLC5A6
CAD
ATRAID
TRIP4
PCLAF
SEC13
NFAT5
FRG2C
RAD50
POLG2
DDX5
CEP95
DUS2
DPEP2NB
DDX28
TIMM23
CRLS1
NFE2L2
METTL25
CCDC59
MED23
INTS12
GSTCD
SUMF2
GTF2H2
MKRN2OS
MKRN2
MRPL4
SLC39A13
PGAM5
FAM98B
MRPL55
NUDT9
TEX38
ATPAF1
PTOV1
SACM1L
CACUL1
ERLIN2
COA8
BAG5
C10orf95
STK10
EFCAB9
LSG1
SSU72
CLCN7
WDHD1
SOCS4
FAAP100
PARK7
TMEM262
TFDP1
SAR1B
YAE1
PEBP1
SAMD13
NOC4L
DDX51
TATDN3
NSL1
TBL1XR1
GOSR2
CALM1
GPHN
SH3GL1
CHAF1A
DCP1A
DRAM2
CEPT1
HNRNPU
FAM156A
FAM156B
NEURL4
ACAP1
SLC25A40
DBF4
PSMG3
SMYD4
RPA1
CYREN
ZNF18
AP5Z1
SPATC1L
NCBP3
CYP20A1
TRIP13
BRD9
CSNK1G2
ZNF639
TRIM25
ZFAND3
TAF4B
TIMM23B
PARG
ZNF286A
PBK
PPRC1
USP15
OAZ3
DNAJC11
VSIG10
PDS5A
STXBP4
COX11
FRG2
EIF3B
USP32
RHEBL1
KMT2D
VPS37B
DHX40
TMA7
CCDC51
ATRIP
ZNF800
NBPF1
ETV3
MAP3K7CL
CCT8
FUS
INTS13
FGFR1OP2
RPL10A
MAP4K5
ATL1
SPRTN
EXOC8
ANKRD26
N6AMT1
PHF12
RAB35
DNAJA3
CORO7-PAM16
CORO7
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
PGP
SMARCA4
BRICD5
XRCC5
CASKIN1
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
PAGR1
MAZ
TUBD1
RPS6KB1
FAM220A
VDAC3
MVP
KHDRBS1
ENTPD6
POLA2
APOLD1
SDHA
CCDC127
CXorf38
PRMT2
RAD21
SMIM11B
SMIM11A
ACTN4
LUC7L2
SRSF10
FAM98A
BNIP3
VPS26B
NCAPD3
LONP1
CATSPERD
SNAP47
JMJD4
ZC3H8
SAYSD1
TMEM143
SYNGR4
BANP
MCRS1
PDRG1
TOLLIP
XPO5
POLH
ATP6V0E2
SAMHD1
FAM122A
ITPA
DDRGK1
CENPBD1
PPP6R1
ZBTB17
GTF3A
RANBP3
EID2B
EID2
EHMT1
ABCF3
DAGLB
RABIF
TMEM250
NPRL3
UAP1L1
MAN1B1
FAM24B
LYRM7
HINT1
RPP38
ACBD7
THAP7
RAX2
MRPL54
APBA3
SPPL2B
LSM7
CHMP7
CBX5
WIPI2
HNRNPA1
HNRNPH1
MYPOP
ZNF12
ABCA3
PRR30
PREB
HNRNPL
RAB18
MIS18A
NDEL1
TK2
CKLF-CMTM1
CKLF
MTHFSD
FMC1-LUC7L2
FMC1
USP21
IFNAR1
NAGK
FAM71E1
EMC10
PPOX
SH3YL1
ACP1
MOK
CRTC1
ALKBH5
SLC2A11
TMED4
DDX56
XRCC2
PATL1
PITPNB
LOC100287896
LIPT2
KDM8
C19orf81
RCBTB2
MAP2K7
CBY3
PPP1CB
YEATS4
PPP2CA
UFC1
RPL36
MICOS13
HSD11B1L
CDC7
WWP2
NOB1
FAM200B
SLX4
SELENOI
ADGRF3
FADD
NELFCD
PTK2
TMEM141
CCDC183
SOD2
SPDYE6
LOC100289561
MAP2K2
MRPL45
PTPN4
WDR4
SAFB
SAFB2
ZNF576
IRGQ
GPI
OARD1
NFYA
CHD1
FXYD3
RBM17
MRPL24
HDGF
OPA1
FUT8
MTCH2
TRIM37
NPM1
SMG9
SRSF1
VPS13A
CACYBP
NANP
ZNF583
HASPIN
FAM120B
NUP107
AMZ2
MRFAP1L1
BLOC1S4
OSCAR
NDUFA3
THOP1
SGTA
HP1BP3
RALGAPB
TOMM20
DYNC2I1
RTL10
GNB1L
POLR2J3
NUP50
TRMO
MSL2
GMCL1
DPF2
AKAP1
SNRNP70
CCNQ
TDP2
ACOT13
CCT5
ATPSCKMT
THAP5
DNAJB9
GDF5
CEP250
SPOP
SARS1
SRRM1
EEF1AKMT1
TAX1BP3
EMC6
ACAT2
TOR1AIP2
TOR1AIP1
CRB1
CAPZA2
GATD3B
GATD3A
SPDYE7P
POM121
INTS7
DTL
ASNSD1
ASDURF
TMEM139
CASP2
THOC3
COP1
SMIM14
CALR
NAPG
PPME1
C2CD3
MAP1LC3B
FBXO31
GRB2
DHDDS
AP3B1
UNG
ALKBH2
LRFN3
RAD23A
PRR14
FBRS
SPDL1
ARFGAP3
DYRK1B
MRS2
PBLD
HNRNPH3
CCDC106
TBC1D5
TMEM209
SSMEM1
RNF149
MAMDC2
SLC39A7
RXRB
RING1
HSD17B8
SHBG
FXR2
C6orf136
CDC34
USP10
STS
PUDP
GPS2
EIF5A
WDR13
EPS15L1
U2AF2
XPO7
DOK2
PDXDC1
NUP214
UBE2M
CHMP2A
PAPSS1
TMEM70
ELOC
IPMK
CISD1
WDR74
STX5
NDUFA8
MORN5
RBAK-RBAKDN
RBAK
ZMYM4
HSF1
BOP1
C8orf48
COL11A2
SRD5A1
NSUN2
CDC20
ESRRA
CATSPERZ
WDR18
PRELID3B
USO1
TMEM104
NAT9
SMARCC1
TASOR2
SS18L2
SEC22C
ARPC2
ZNF638
PALB2
DCTN5
CC2D1A
C19orf57
ZNF664-RFLNA
ZNF664
CCDC92
TIGD1
EIF4E2
HINFP
RSL1D1
SYS1
MTG1
MYL5
ATP5ME
TMEM63B
MRPL14
SCAF11
ERCC6L2
KIFAP3
TFB2M
CNST
THAP11
UROS
BCCIP
MORF4L1
MKNK2
TMEM43
CHCHD4
SLC25A11
RNF167
PFN1
UTP18
MBTD1
TIGD6
HMGXB3
TRIP6
SRRT
GZF1
KCNN1
MINK1
TMEM63A
LEFTY1
ZNF34
RPL8
RPS7
CCDC93
AURKB
PPP2R3B
C15orf40
ZBTB45
C5orf24
STYXL1
MDH2
GP1BA
SRCAP
LOC730183
MPC2
MAPKAP1
DCAF6
WDR43
TMEM109
PRPF19
CDC5L
TENT4A
GID8
DIDO1
DFFB
CEP104
POLR2J2
DSN1
POP7
EID1
ING1
CARS2
DLGAP4
ZNF517
NUDCD2
HMMR
MRM3
GLOD4
NBPF3
TOPORS
SMIM27
NUDT1
MRNIP
MRM2
GOLGA1
SPDYE16
ALG8
HBS1L
GABARAP
TIA1
PCYOX1
POLR2J
SCAND1
PARP6
PUM2
SKA3
MRPL57
BORCS6
AURKAIP1
FIP1L1
FZR1
DOHH
PUF60
MAPKAPK5
CBWD5
PRDM4
PIAS4
NR1D1
PPAN-P2RY11
PPAN
ANGPTL6
CPLANE2
CBWD3
TFAP2A
C6orf89
TMX1
ENDOV
MBD1
CXXC1
PTBP1
TSEN2
ZZZ3
MAD1L1
PHF23
DVL2
AHCTF1
LINS1
ASB7
RFX1
UCN2
PFKFB4
TLX2
PCGF1
LBX2
UPF1
CLPTM1L
B9D1
ZBTB14
COPB2
CBWD6
AASDH
WWP1
RPS29
WRNIP1
MYLK4
NOP16
HIGD2A
GPBP1
RPS11
RPL13A
ZBTB2
TIPIN
MIDN
CBARP
ATP5F1D
CFAP410
RPS19
MARCHF7
IPO11
DIMT1
NAPB
RPRD2
TSACC
CCT3
TAOK1
TTC32
RNF32
MAK16
ATXN7L2
POFUT2
ATAD3A
WWOX
ZNF48
ZNF248
AMACR
ARHGAP35
AP2S1
KIF22
COASY
SLC15A4
C11orf80
PRKDC
MCM4
ANO10
ABHD5
TAS1R1
NOL9
NFXL1
SBNO1
NOP14
GRK4
C8orf37
PTPN21
NUP153
ARF4
PEX12
AP2B1
STX1A
ZFP91
LPXN
IQCC
DCDC2B
CCDC28B
TRAPPC9
TSSC4
VARS2
GTF2H4
PPP4R3B
DNMT1
PRPF39
PSMB2
CNOT4
TMEM79
SMG5
SIRT5
PGRMC2
UIMC1
KAZALD1
E4F1
ZNF692
CCNC
MLX
HSPA4
ZC3H14
CAPN7
POLRMT
FGF22
GPAA1
EXOSC4
TMEM18
ATP5PO
VPS13C
C2CD4A
PAOX
METTL22
ECHS1
TMCO1
EIF2S2
ABHD10
KDM3A
SPEN
DHX9
CENPS-CORT
CENPS
CCSER2
RPL27A
SLC25A10
MRPL12
LHX9
C1orf53
RAD23B
NRF1
EIF2S1
COQ9
CIAPIN1
ATP6V1D
TUBGCP5
INO80C
SREBF1
ATP5MC2
SRSF11
PPA1
RPL12
LRSAM1
UQCR11
VMP1
PTRH2
SNX5
MGME1
EHD1
ZNF182
SPACA5B
SPACA5
ZNF329
TMED3
SMG7
SPG7
NAT10
ELP6
VMAC
NDUFA11
ICMT
HES3
TIGD5
EEF1D
SLC30A5
XPC
LSM3
CD320
E2F6
ZNF652
NAA35
RPS6
CSNK1A1
TMX3
CCDC102B
MOCS2
DNAJC27
LTV1
NOL11
HSD17B1
PAPOLA
CLIP4
NAA38
THAP12
GVQW3
UBE2D3
ZDHHC12
CST6
TMEM120B
YIPF2
TIMM29
HEXIM1
UBR3