ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ CDK9: STRING

DCAF12
MAMDC2
RLF
CCAR2
C8orf58
ZNF684
IPPK
EXO5
ZMPSTE24
CD33
CAP1
ZFP69B
SCNM1
LYSMD1
GRPEL2
MTMR9
LAMP1
ALOX5AP
SH3BP2
CD1C
CAB39
GLRX
ITGB2
TEAD3
RPS19
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
WDFY3
CSF1R
LGALS8
NFYC
NLRP12
ITGAM
RXRA
NCF2
SUN1
NCF1
STEAP4
PNP
RAB3IL1
PGA3
NDUFS2
ADAMTS4
WDR74
SNRNP200
S100A8
IL1B
RAB24
PRELID1
TLE3
FAF1
PGK1
VTA1
NMBR
SPATC1
ZFP69
PPT1
TSSC4
HAUS6
IL7R
HBS1L
CD244
ABT1
GPBAR1
MTF2
FRG2C
ARHGAP30
EXOSC3
SETDB1
PGA5
MRPS18C
HELQ
CITED4
TRIT1
SP110
IPCEF1
RMND1
ARMT1
CEBPD
FCER1G
FLI1
RASA1
EXT1
SLC12A6
NOP10
NUTM1
CMIP
PGA4
TP53I11
MRPL24
TMEM154
ARPC3
PPIH
COL9A2
SNAPC3
FRG2
CCDC200
IL16
RMDN1
DUSP7
PDLIM2
SASS6
FCGR2B
ZNF408
ARHGAP1
IFRD2
FCAMR
NUF2
RNF149
NDFIP2
MTPN
LUZP6
CCND3
PRR5
SPDYE13
MMP9
POMP
UBR7
GON7
RNPEP
MFSD2A
VCPIP1
C8orf44-SGK3
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
CMTR1
HIBCH
FAM207A
MIA3
ARPC2
ZNF718
ZNF595
TLE4
SMAP2
NIP7
COG8
SRSF11
LRRC40
RASSF5
SLC25A32
DCAF13
DISC1
GPR68
ATP5MPL
RPL37
FOXJ3
HEATR1
ZNF410
RAPGEF1
MMACHC
CBWD5
CBWD3
DUX4
MSH6
RUNX1
FEM1A
TIGD4
ARFIP1
PPIAL4F
PPIAL4E
PPIAL4D
VPS33B
PPP1R12C
RWDD1
TRIM35
PTK2B
CEACAM21
UBAP2L
C1orf43
ATG5
EIF2D
STK4
UBAP1
EIF3D
SORBS3
URM1
YES1
TFB2M
CNST
CUL7
MAP2K1
SUSD6
EPRS1
KHDRBS1
ZP3
SELENOH
MEFV
ZNF484
ADGRE1
NIBAN3
ANKRD33
INTS9
HMBOX1
DNAJC10
ADGB
DCP1A
CHMP4B
RUBCNL
OAS3
MRPS31
UBXN8
TTC14
TNFAIP8L2-SCNM1
TNFAIP8L2
TMEM59
TCEANC2
RTF2
MOB4
TMEM30A
USF1
UCHL5
RO60
DOCK8
TNFAIP1
IFT20
HMGB1
USPL1
TIPRL
FCRL4
TMEM127
CIAO1
ARID2
TOMM20
WDR55
MAP1S
SERPINB13
DGAT1
WDR70
TGFBR2
CPNE5
TIMM21
FBXO15
MDM4
PEX12
MED18
PISD
ZNF197
MXD3
CCL26
GTF2H2
DCAF10
LTB
LST1
TPRKB
GPAA1
EXOSC4
XRCC5
SIGLECL1
FPR1
RGS12
ATP6V1C1
UXS1
TAGAP
DMRT2
TTC13
ARV1
SIGLEC11
RPL8
HARS2
HARS1
INPP4B
WDPCP
MDH1
MTRNR2L8
STK36
RNF25
KIFAP3
UTP3
ZNF696
CLIC5
MYBL1
NOTCH2
NECAP2
TMEM104
NAT9
INAVA
LCP2
IFNGR1
KBTBD6
ARHGEF1
CD1A
C4orf3
RGL1
ARPC5
CXCL1
SIGLEC9
OSCAR
NDUFA3
SCAF11
TBL3
RNF151
C6orf89
NOXA1
CCL2
NFKBIL1
ATP6V1G2
ACTRT3
RTCA
SLC33A1
TEKT2
ADPRS
TLE6
PRPF3
SCAMP2
PDCD2
AGTRAP
CTSG
MAP3K7CL
CCT8
TMEM53
ARMH1
ZNF267
IKBKE
VPS25
RCHY1
UBLCP1
NDUFS3
KBTBD4
GCLC
EIF2B3
TCF12
P3H1
FCAR
MIDEAS
AOPEP
MTRNR2L2
MSH3
DHFR
SNX19
NOL11
DR1
RNF141
MRPS23
LRFN3
ASXL2
ZNF622
ZNF227
RRS1
ADHFE1
EMILIN1
FKBP1A
PKD2L2
OSM
ATG16L1
PIGM
NSUN5
AKR1A1
WNT2B
RAC2
FUCA1
PPP1R12B
PEX3
ADAT2
CBWD6
CBWD1
HAX1
MTRNR2L1
MFSD10
ZFYVE1
SDHAF3
N4BP2L2
FBF1
ROPN1L
CCL17
MARCO
SCAF1
RRAS
ACAD9
OTUD7B
PSMD7
SDCCAG8
CEP170
APPL2
TADA1
SF3B1
TRPV4
CHCHD5
ARHGEF12
GOLGA7
B3GALNT2
TRIP4
EXOC3L1
E2F4
TPK1
GOLGA5
CLDN19
CALHM6
SLC35B4
AGGF1
WDR61
TMEM186
PMM2
GOSR1
DENND4B
TCTEX1D1
PIGU
PIKFYVE
ADGRG5
STAU1
FAM120B
SLC24A1
TAF11
ANKS1A
PDPR
CSF2RB
C1orf74
LRRC46
PHACTR4
TATDN1
NDUFB9
RALB
FBXO46
MEIOSIN
CCNL1
UCK1
CEP350
THAP12
GVQW3
ZNF780A
SNX3
GSPT1
ZNF56
ZNF142
BCS1L
ACVRL1
ZNF337
OPA1
IBA57
PIGBOS1
PIGB
PA2G4
TERF2
IPO8
GALK2
COPS2
NFX1
THOC3
PRKAB1
CAPG
SNRPC
XRN2
TOR4A
NME7
BLZF1
NOB1
TLE1
LOC100289561
ZNF331
A2M
SRGAP2C
SRGAP2B
FCGRT
FAM227B
DTWD1
TBPL1
RPS6KA1
FITM2
STARD6
C18orf54
THOC5
ARHGAP25
CSRP1
RPL27
CLPP
PACC1
TAF12
SLC22A16
NR1D1
GTPBP10
KBTBD7
MTMR14
KLF2
SRSF4
FASLG
BRIX1
ITGAL
DUSP6
PHB
DESI2
UBL7
RAD50
ATP5PO
DNAJC16
CASP9
AP1B1
PLEC
MAN1B1
PICALM
PRKCD
S100A2
SEMA4C
MRPL17
PHC2
WIPF2
HDDC2
YKT6
RPL37A
CARD19
HK3
SYMPK
FOXA3
HSPA13
KATNBL1
GET4
CFAP298-TCP10L
CFAP298
IRAK1BP1
SUCNR1
LILRA2
JOSD2
ASPDH
PGBD4
EMC7
NOL6
TPM3
RANBP3
INTS1
UBR1
C22orf34
ELOF1
EML6
CIAO3
AP2B1
ZNF668
ZNF646
DYNC2H1
ADAMTSL4
TSN
TOR1AIP2
TOR1AIP1
CCDC149
SLC39A1
CRTC2
DBI
C2orf76
PDF
NAPG
PPCDC
NLRP3
DAP
GNAI2
MED10
TBL2
SLC18A1
CXXC1
LAMTOR5
TPT1
TAF13
RAB1A
RRM1
HUS1
NUP58
CCDC30
ZMYND12
PPCS
AHCTF1
GLI4
SLC31A1
FKBP15
SSNA1
ANAPC2
TRIM41
TLN1
CREB3
WDFY2
NCSTN
COPA
MRFAP1
SPG11
ORMDL3
LYPLAL1
C1orf54
APH1A
GUK1
TOMM6
OAS2
COPB1
ZNF697
UNC45B
OCSTAMP
CALR3
C19orf44
VPS26C
TMEM39A
NR3C1
ANXA2R
NUP133
RNF181
BOLA1
SF3A3
RPS16
RGPD2
RGPD1
SLC37A4
ADORA1
TBC1D23
PUM1
GOPC
ADAM10
NFAM1
EMP3
ADSS2
KCTD5
SF3B5
CCDC114
MDN1
RNF14
ACP3
CCL22
TMX1
TUBA8
MEF2C
GTF2B
IGSF10
RPIA
ZW10
BOD1L1
GTF2H2C_2
GTF2H2C
ZFP64
SIGLEC6
CEACAM4
PES1
ZCWPW2
AZI2
ERMARD
ATG7
MPZ
MTFR1
TCN2
PPME1
C2CD3
ZNF614
KIAA0513
RPL5
MRPS35
SEMA4B
MLKL
C1orf198
VCPKMT
PARVB
NKAIN1
RPL29
LMBR1
PPP2CB
BID
ROGDI
IL1RN
SMIM22
SNX17
EIF2B4
OBI1
MAPKAPK2
BOD1
TRAPPC4
RPS25
ADAM17
CERS2
ANXA9
CNOT1
RHEX
SEC14L1
NUP155
KCNK6
TRMT11
SYNE3
CHN2
CTU1
MRPL55
RSL24D1
MTMR6
LAPTM5
ADAP1
PUM3
SART1
SH2B1
TUFM
SYNGAP1
CUTA
SLC1A5
GNPAT
C1orf131
SNAPC5
IL6R
ETNK1
GIMAP8
DNAH14
MED23
SKP2
LMBRD2
COPS8
XRRA1
SPCS2
SRP9
CHMP7
USP3
FIGNL2
CSNK1A1
CLEC16A
DEXI
CTDP1
SRPRA
CATSPERE
DECR1
RPL36
CTNNB1
SLC35F6
NUDCD1
ZNF350
RPL22
SNAP47
JMJD4
MED4
GZF1
ABCA3
C1orf100
CCDC146
ZNF221
KIF15
KIAA1143
DHDDS
OCIAD1
LAMTOR1
CHMP5
BAG1
RAB44
ZC3H6
ZNF175
RPS20
UBE2V1
LTN1
TNNI2
USP15
DCPS
VIT
MRPL44
RPL11
TRIM37
EMC8
COX4I1
CCL4L2
NKIRAS1
RPL15
RC3H2
DDX41
EEF1AKNMT
RARA
TRIP11
EIF6
BIN2
RASA3
RIC8B
MEN1
HIGD2B
BBS4
RNF216
GTF2E2
STON2
PNPLA6
GGPS1
ARID4B
VIRMA
LRRC29
NDUFC1
NAA15
KIAA1586
ZNF318
SYK
ZNF12
GRK6
TRIAP1
CTTN
PTK6
EFHC1
ABCD3
PRRG2
NOSIP
PCBP2
CD53
SMARCD3
SPINT1
LTA4H
IPO13
CRBN
ORC5
AHI1
S100A9
EDEM3
PPP1R11
SLC44A1
PPIAL4H
LATS1
YWHAB
INPP5D
ZNF397
PSMA6
PPIAL4C
PPIAL4A
CGAS
LILRB4
ZNF567
RPL38
UTP23
ZNF354B
NBR1
CTR9
TLR4
TRIM25
TESK1
LYNX1-SLURP2
LYNX1
FRG1
MAGEF1
NCKAP1L
THEMIS2
TRIM55
PPP6C
ARID3B
LONP2
ABCC11
KIF2C
POLN
HAUS3
ATP2B4
CD5L
THRAP3
ZNF230
INTS12
GSTCD
SEC13
BRF2
GHRL
MCOLN1
EED
SMIM26
TOMM7
YTHDF1
CNPY3
APOL2
CYB5R1
DAB2
FAM185A
ZNF354C
ZNHIT2
MRPL49
FAU
NSMCE3
ESRP2
WDR36
ST7L
CAPZA1
AGT
MAD2L1BP
GTPBP2
ERI1
TAF1B
NDUFAF6
SGO2
NCF4
GRK2
TSPAN16
SSBP1
DUS3L
NCBP2AS2
NCBP2
VKORC1
LIN54
SPRTN
EXOC8
TCHP
POM121
OAF
IFITM2
DDX23
RPS7
SKIV2L
NELFE
ZNF549
COX7A2
SAMD4B
LMO2
ABCB10
ZC3HAV1
RNF139
AP3B1
AVIL
GBA
ZNF212
SNU13
PTTG1IP
LILRA1
ZNF225
CNIH4
ERLIN2
SRBD1
DNTTIP2
TNK2
BHLHE40
KATNA1
OAS1
RRP15
GABPA
ATP5PF
TRIM46
KRTCAP2
MRPL45
SLA
FAM200B
ICAM1
TBP
PSMB1
UFL1
KLHL20
PKN2
FBXO28
ZNF658
TRMT61B
GNAI3
DHX15
TNFSF10
TPR
ODR4
MAK16
HMGCL
SHPRH
SLC30A7
EXTL2
TMTC3
CEP290
ZNF189
MRPL50
CDK19
AMD1
MRPL16
DAXX
ZBTB22
MTERF1
C2CD5
CDC42
PROS1
NAPB
CEP63
ANAPC13
DNAJC5B
NPRL3
DEDD
PPIP5K2
RPL6
LTO1
TRAF3IP3
OSBPL7
TCTEX1D2
TMED4
TM6SF1
ZC3H11A
ZBED6
UBE2Q1
ALG10B
TOMM22
ZNF721
PIGG
NDUFAB1
SUCO
FAM32A
LYPLA2
EXOSC6
PPIL4
PSMD9
HPD
TNPO1
STAT2
APOF
SIGLEC7
TMEM125
TMEM222
SYT11
GON4L
PPP1R8
UNC50
COA5
MED20
BYSL
CHEK1
TEP1
TMIGD3
ADORA3
ALG10
NDUFV1
MUC3A
WFDC3
DNTTIP1
ITGB1BP1
CPSF3
WDFY1
WDR27
C6orf120