ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039042 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◣ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
ZNF335
PSMD1
MAPKAPK5
DYNC1LI2
NME6
SUDS3
IPO13
PSMG2
CEP76
POLR3F
DZANK1
CACTIN
VTI1B
NVL
NUP205
NCLN
TBCK
AIMP1
HADHB
HADHA
EFTUD2
CCDC103
NUP85
SRD5A1
NSUN2
POLR2E
RPL21
TSNAX
DCTN1
RWDD1
REXO1
STAM2
MRPS7
GGA3
HSPA9
ID2
HOXA2
VDAC2
SLC35B1
FARSB
SKP1
STAM
LYRM4
FARS2
EXOSC5
BCKDHA
BBS9
GOSR2
VARS1
MRPS5
IRGQ
ZNF576
UPF2
TSN
PSMD12
PAK1IP1
C6orf52
RPS23
ATP6AP1L
DPH6
ATP5MG
GOLGA5
C19orf48
CAPRIN1
EIF4ENIF1
IQCG
RPL35A
SMC2
SEC61B
PES1
TTC8
RBKS
BABAM2
PI4KB
BLCAP
TM9SF1
COMMD1
CCT4
COX7A2L
RBBP5
SUPV3L1
ACTR10
PNO1
TMED1
NDUFA4
USP1
ZRANB2
ISCU
SART3
RBPJ
FAM104A
C17orf80
ANAPC7
PDAP1
BUD31
OSGEP
APEX1
ICE1
ADK
AP3M1
SELENOF
HS2ST1
RABGGTB
XPNPEP3
ST13
UFM1
ZFHX3
RPS27A
CLHC1
PROSER1
NHLRC3
MRPL11
PCBP1
CLGN
LTBR
SCNN1A
PTK2B
C12orf29
RPS12
ZGPAT
ARFRP1
ZNF608
NEO1
CDC42EP3
SF3B3
COG4
PAF1
MED29
NSUN6
ARL5B
PDE12
TLE2
PTGES2
VANGL2
NR2F1
HEXIM2
RBMS3
BAG6
APOM
GATA4
GABRB2
MRTO4
EMC1
MYRIP
HEY2
GADD45GIP1
MBD2
NDUFA10
EIF2S3
ACOT2
ST7
MSX2
SLC30A4
RPS29
LRR1
SUCLG1
ZNF383
DIAPH3
ZNF746
HES1
ARHGEF10L
LAMA3
CDC73
CABIN1
SKIL
SEMA3E
ST18
TNK2
RPL7
RDH10
DDX39B
BNIP3
CACYBP
PDHX
APIP
KAT6B
LIN28A
RARA
FREM2
SEC11C
TBX2
TXNRD1
TBC1D9
ARHGAP11A-SCG5
ARHGAP11A
GORAB
PIN4
PCBD2
OAZ3
ZFHX4
HOXA1
SMAGP
FMN1
FOXP1
SERTAD2
MET
TTI2
PCDH15
CDS1
MGP
PRUNE2
CNPY2
MKRN2
GTF3C4
DDX31
ARAP2
GTDC1
EPM2A
SPCS1
GLT8D1
ALKBH5
IL20
CNR1
NDUFB3
FAM126B
FRRS1
RSRC1
CXXC4
ATOH1
GPR108
RPS10-NUDT3
RPS10
USP17L15
NDUFS7
TAF9
RAD17
AK6
RPN1
GFRA1
ZNF395
TNFRSF19
NLGN1
METTL25
CCDC59
MYZAP
GCOM1
KDM3A
OTUD7B
INKA2
SPAG17
RARG
WDR74
DONSON
TIGD1
EIF4E2
DHRS3
TMEM70
BNIP2
SPIN1
GEMIN2
ZNF341
TMEM106B
PRTG
ID1
SLITRK6
MRPL34
ABHD8
HOXA4
EIF3D
ACKR3
B3GNT5
MAPRE1
MEIS2
POGLUT3
SLC25A53
RUNX1T1
DENR
CFAP69
SCOC
STK36
RNF25
PEX14
KMT2A
POLR3A
TMPRSS11F
LIX1
MCU
REC8
CYP26A1
RABGAP1L
CTF1
ELOVL6
ATXN2
SLC25A6
ACOT1
LMO1
NEFH
SEMA6D
UBE2I
REL
BRWD1
SEPTIN2
HDLBP
RNF207
IPMK
CISD1
COX5A
OSGIN2
NELFA
KAT6A
FGD3
USP34
APLN
C16orf91
EOMES
TCF7
PRKD1
NXPH4
SHB
ADM
H2BC5
CALM2
MIGA1
ZNF385B
VPS33B
HUS1
YTHDF2
ADAMTSL4
SRSF11
LRRC40
CBWD5
CBWD3
CRABP2
SMARCD2
MYADM
TRPM7
IGFBP2
PDHB
EBAG9
RBBP8NL
DNMBP
SPATC1L
CIAO2A
TPRA1
CCDC174
PHIP
ZNF507
CS
ACYP1
ZC2HC1C
IMMP1L
ELP4
PDE4D
PDCL3
PXMP2
POLE
LOC100287896
LIPT2
STX19
KANSL3
ATXN1L
PCLO
SSBP2
HSPA4L
ZBTB17
CLCN3
OTUD4
SYNJ2BP-COX16
SYNJ2BP
COQ5
UFSP1
ITGAV
DUSP9
EIF4H
TBX3
MGST1
NR2C2
TANC2
HNRNPD
ZDHHC17
ACBD6
ACTR3B
RILPL1
PRR13
CDKL2
FAM168B
FANCL
POU2F1
TMSB4Y
RPRM
TMPRSS12
SH2B1
CBX3
HNRNPA2B1
MTF2
IGF2BP3
UROS
BCCIP
VEPH1
CEP70
PRKAG2
SLC40A1
TLE4
TCHP
CYP51A1
ESRRG
DLAT
NEUROG1
POLR2J3
ARSB
KCNH1
GTF2IRD2
LSM8
NRDE2
SORBS2
ZNF844
IMPA1
NCBP3
YEATS2
KLHL32
MELTF
KCNS3
CBWD6
CNOT10
PTGES3
TMPPE
GLB1
MEMO1
EML5
BCAS2
GPRC5A
CCNC
JAK1
RASSF6
TCF4
BAG2
PDE4DIP
MTMR10
RTL6
TAF1A
C2CD5
PALLD
PCTP
PEX2
IFI16
PYDC5
GGH
STX18
MTMR2
MPP5
EYA1
CCDC102A
UBE2V2
HOXA3
SNX3
PXYLP1
EID2
ZBED9
GPR37
SPECC1
EPHA6
PIP4K2B
ATXN7L2
ID3
NEUROG2
FOXJ3
USP12
IFT22
BAMBI
PLIN2
CMSS1
FILIP1L
COLEC12
PLEKHD1
C6orf136
NEK3
RAB11FIP2
CMTR1
ZNF384
ARHGEF5
CFAP46
CAPZA2
TBC1D5
BCAP29
PLS1
RYBP
EFCAB2
LUZP2
TTK
FAM162A
CCDC58
ARL14EP
PHACTR2
SCAP
VWA8
PELI2
ZSCAN12
SBF2
RAI14
PPP1R13B
TXNDC11
SEMA4B
KMT5C
RPS3A
DRAM1
NUTM2E
EIF5
ERCC6L2
MRPS36
PIGU
WDR11
REV1
CEP41
RHOBTB1
HEBP2
SKAP2
PIK3R1
MANEA
FSTL3
ADH1C
ADAMTS7
C15orf61
SMARCAD1
NR2C1
FNDC3A
ANKRD36C
MGST2
JMJD1C
GDF6
ATP6V0A4
NT5DC3
NEUROG3
VEZT
FGD6
PMAIP1
BICRA
NBAS
ANKLE2
SP5
ANK2
INSM1
CCDC200
MALRD1
MRPL38
RBBP7
GADD45G
GRSF1
ARSG
KAZALD1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PRDM12
RASSF2
RARB
FLOT1
HOXB4
INAFM2
DUSP6
BFSP1
RNF149
SH3BP2
AXDND1
UPF3A
METTL11B
RGS12
LPIN1
HSPA1B
ARID5A
PARK7
DSCAML1
MTRNR2L2
CCPG1
C15orf65
RPS6KA1
SEC14L1
C11orf24
KCNAB2
ARHGAP24
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRHL3
HOXC5
SLCO4C1
CCDC88A
NADK
FGR
STK38
KLF17
FGFRL1
NBEAL2
NKD1
VOPP1
SKIV2L
NELFE
BIN2
NCOA2
MTMR4
CDCA7L
DIAPH1
ZNF76
NBPF1
USP15
CAMTA1
WNT10B
POR
MEF2C
LPCAT3
MTRNR2L8
LNPEP
CPSF4L
DDX3X
DENND2D
PRDM10
IQCH
AAGAB
NFKBIA
ZCCHC3
TBC1D8
CD38
VAV1
TRAF4
OTX1
ATP23
PNKD
PCNA
RASSF5
SPACA1
ING1
HES3
CLDN2
EXOSC4
IQGAP2
PPIB
MINDY2
CNOT2
SLC9A1
PDPN
PKN2
PLCB2
NKIRAS1
H6PD
IFRD2
FAM110A
NDFIP2
PRDM1
HESX1
CFD
TLE6
SLC35E2B
PLEKHO2
TBRG4
NR1D2
CCDC114
JAK3
CYCS
RNF139
SH3TC1
DYNLL1
SP7
ZDHHC4
HMGCS1
ARIH2
GTF3A
DPP9
PIK3AP1
CLIC4
ZNF740
CSAD
SOD2
KCTD6
ADCY7
PRSS56
AKIRIN1
KIF26A
DGKZ
SLC35E2A
CBFA2T3
HOXB3
TMEM222
NOTCH2
FAF2
PKM
SRPRA
HES5
RBL2
FCHSD2
SSX2IP
KIF21B
CTTN
USP3
SNAPC3
CD164
TRMT6
MCM8
SLC39A13
CSRNP1
BAZ1B
MRPS24
TRERF1
ANKRD13D
DTNB
RMND5A
ARHGAP4
UNC13D
PIP4P2
LAPTM5
MAP2K1
CENPH
GATD3B
GATD3A
CLTC
RFESD
ZNF25
USP42
MTCH1
MAD1L1
KCNH2
SLC10A2
IL21R
PPCDC
DGAT2
THRAP3
RNF125
RASGRP2
ARHGEF1
PEAK3
MRPS31
ZNF503
GFRA3
ATG16L2
RAD50
PKDCC
CDX1
ZSWIM6
LRIG3
PSMD3
PIKFYVE
HECTD3
ARL4A
SBNO2
SDE2
FBXO41
RWDD2A
PGM3
MAPRE2
SMPD1
KEAP1
MAPKBP1
RXRA
CPVL
CHN2
WTAP
ZNF414
STRADA
ERLIN2
CASC3
ASNS
MAGEF1
ZNF318
RCOR1
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
NIBAN3
USPL1
HMGB1
MC1R
FXYD2
PANK2
UBL7
C1orf159
ATAD3B
MAST2
HOXD3
FAM120B
OR2L13
DYNLT1
NGRN
PHF19
BUD13
TIGD5
EEF1D
VPS37C
RER1
MORN1
TUBB
RNF103-CHMP3
MAPKAPK3
CISH
NIBAN2
IFNGR1
ARF3
GPATCH8
C18orf32
NCBP2AS2
NCBP2
UPP1
HOXC6
USP21
CYB5R4
ATAD3A
CNOT6
JAKMIP1
KIF1C
INCA1
FAM227B
DTWD1
DDX23
TDP2
DENND1A
BHLHE40
ACOT13
RAP1GAP2
FABP5
YY1AP1
DAP3
C12orf65
HPF1
ADAM17
NINJ2
PCMT1
SLC35E3
KMT5A
SPDYE14
SPDYE10P
NMNAT1
LZIC
SYPL1
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
ARHGAP45
TSPAN4
POLR2L
SEH1L
NUDT15
CEP135
CCNL1
ASB1
NANP
MYCBP2
GSPT1
PTDSS1
MTERF3
SLC7A5
MT2A
LSM5
AVL9
UNK
MTMR1
CDS2
MFN2
ATG5
HYLS1
LTB4R
TRAP1
C21orf91
ZNF219
LANCL2
RPLP1
RITA1
DDX54
APBB1IP
CTSC
HOXC4
ADORA2A
KRI1
ITPRIP
DISP3
MEPCE
ASH1L
ZCCHC24
SNUPN
PSMF1
HMGCL
GFER
GTF2H3
EIF2B1
QPRT
DLX2
TLE3
KDM1A
TRAM1
UBIAD1
SP2
SLC16A6
THUMPD3
MAPK6
CD63
FNTA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PDZD2
NAA40
MBD6
ARF4
ZFAND2A
LAMP1
CARMIL1
NOC4L
DDX51
IL6R
TAS1R1
NOL9
NREP
ATOH8
ARHGAP27
BRAP
ACAD10
RPS3
EIF1B
FKBP1A
RPL8
DUSP4
CHST11
LONRF3
HNRNPF
ZCWPW1
PGD
ATG101
ACVR1
TMEM65
PGLS
TKFC
DDB1
DNAH7
MDM2
TRDMT1
RIMBP3
GARS1
GFUS
RAN
LCOR
FAF1
CNPY3
SGK1
BOD1L1
SUPT4H1
RCOR3
SMIM20
DNAJB2
TMEM199
POLDIP2
FKBP5
CSNK1A1
GALE
DYNC2H1
CDC42
POLD2
PPIL4
SPRY2
DENND4B
SMG6
GPCPD1
EHD1
DHRS4L2
NCKAP5L
MRPL20
RERE
C6orf89
SNAPC5
PPP4R3B
B3GALNT2
CASTOR2
RCC2
POLG
ABHD12
TBL3
PRKAB1
IPP
RAC2
ZBTB45
NUS1
WBP1L
TPP2
RBSN
CCDC43
TAF12
ZNF593
UBE2K
C1orf232
ZC3H6
FDX1
MACROH2A1
PTP4A2
RNF216
PLEKHM1
FOS
INTS5
THYN1
ACAD8
TMEM41A
RAB11FIP1
DCP1A
SLC35A1
LRRC59
CD93