ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX014752 | NB-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◣ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

FLOT1
PLCB2
NADK
LAPTM5
NCOA2
HMGCS1
PPCDC
SKIL
ARHGAP4
UNC13D
MTRNR2L2
CD38
LCOR
C5AR2
GFOD1
NIBAN3
DHRS3
SPATA1
GNG5
CALR
MTRNR2L8
PCNA
CDS2
ARHGAP45
RASGRP2
DZIP3
CIP2A
MBD6
MAP2K3
FGR
INSIG1
COX20
MYO1G
MYO1F
IDH1
UPF3A
ARIH2
RPS6KA1
P2RY2
CENPH
WDR74
ZCCHC24
NFKBIA
KRI1
NRL
DCAF11
FDPS
FDFT1
MKLN1
NFIC
KAT6B
SSH3
NLRP3
LYL1
ICAM1
BAZ1B
DENND4B
RASSF2
C16orf54
SLC25A19
RBM15
EXOSC4
DRAP1
C11orf68
C11orf91
KAZALD1
DNAJB1
MSMO1
KRAS
PSMD3
PKN1
POC1B-GALNT4
POC1B
EMP3
KEAP1
ZNF740
CSAD
SEC14L1
SNX15
FADS3
RARG
RAB3D
CTBP2
GHDC
CEBPE
LYST
INAFM2
CYBA
BHLHE40
MRPS31
RAB11FIP1
BIN2
HUS1
SMARCD2
ARHGEF18
SREBF1
MCRIP2
ADGRG5
NDUFA4
EPM2A
PIK3AP1
PACC1
TBL1XR1
AGTRAP
PDE12
LRMDA
SMIM20
HMGCR
CDCA7L
NPEPL1
EVL
DUSP10
TCTEX1D4
BTBD19
SLC35D1
E2F3
GRK2
PTPRCAP
LST1
H4C11
SLC22A18
NOL4L
P2RX5
FERMT3
CFD
YARS1
S100PBP
UBE2E1
MTRF1L
AP2S1
NR2C1
IMPDH1
CSK
TM4SF19
ARRB1
KRT8
CYP51A1
RAP1GAP2
EVA1B
AHNAK
ALOX5AP
ANKRD13D
ASB1
SH2B1
CCDC174
MYBPH
HSP90AB1
PLIN2
JUP
TRIB3
HIVEP1
RAB37
TANK
SQLE
GPCPD1
ADGRG3
RBBP5
ANP32E
NCF1
DUS1L
SMCHD1
NINJ2
ZNF746
GBE1
HECTD3
ARL4A
IFNGR1
CD1D
PKN2
ATF3
WDR43
MAP3K8
H4C14
H4C15
TPRA1
MCRIP1
PWWP2B
PIKFYVE
SMG6
ETFBKMT
TAGLN2
C12orf75
SLC12A6
RCAN1
RMND5A
PEAK3
PLEK
UMODL1
CTTN
TBC1D10C
SLC16A3
ZNF414
SLC1A5
DENND2D
PPP2R5B
TLR9
SIPA1
MPG
CTDSP1
GPR160
ICAM3
CPSF4L
C3orf86
SH3BP2
SELPLG
RARB
MINDY2
CDK13
SH2B2
ADRM1
PDE8A
GMIP
SEPTIN9
S1PR4
DENND6A
LDLR
CAPS2
H4C9
S100A2
OPA1
SH2B3
TRAPPC5
NKIRAS1
NR1D2
ATXN7L2
BAZ2A
LRPPRC
GFI1
PDCD4
AXDND1
PCYT1A
MTRNR2L9
SCD
CTCF
ZNF217
ATP2A3
LOC388282
TMEM101
H6PD
FBXO41
ACACA
GPR132
TSPAN32
C11orf21
PPARG
P2RX1
PCNX3
WNT10B
GPATCH8
SLC17A9
TREM1
TRPM2
MVK
POM121C
CCDC154
NAMPT
STEAP3
RBKS
BABAM2
KLHL24
CLTC
MYADM
PHF19
NCOA4
PRTN3
KBTBD2
RGPD2
RGPD1
NDRG2
ZDHHC17
LY6K
KCNAB2
MICAL1
CHPT1
IRF2BP1
MTHFR
CLCN6
CCDC9
LZTS2
ZNF276
PRNP
TMEM143
VPS72
UBE2J1
FKBP14
TRIM11
ZGPAT
ARFRP1
PMPCB
ICAM4
TAF1A
PTCD1
CPSF4
PLEKHA8
BPI
MPO
TMC8
PRKCD
C16orf74
LONRF3
OGFOD2
ATR
TBC1D14
COPS7A
QPRT
HBP1
H4C13
LINGO1
MTF2
TEX2
C19orf53
MFAP4
ZSWIM9
LIG1
NOG
LPCAT3
NUDT15
DOT1L
ADM
STK35
STK3
HSPH1
VIPR2
TFAP2A
ZNF584
GOLIM4
LIMD2
KMT2D
CAMP
CPQ
PPRC1
QRICH1
PIP4P2
ITPRIP
FRA10AC1
PLEKHA2
MRPS15
TNFRSF10A
IZUMO1
H4C4
KANSL3
ZNF846
SRF
BORCS7
IQGAP2
KLLN
DOCK2
LZTFL1
MYO18A
SPN
MAPK12
NTSR1
RNF149
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FKBP5
NEURL2
CTSA
LRRK2
METTL25
CCDC59
SKIDA1
BANP
RIOK3
SP1
FRAT1
NIT2
EP400
DYRK1A
LMNA
EPS15
SNUPN
MAFG
C3
UCN2
ZNF76
ZDHHC4
LSG1
NFIA
ATXN2
AFF1
SC5D
CUL2
KCNE1
DUSP6
IFRD2
UCP2
DMAP1
MIEF1
NLRC3
C5AR1
NDUFS7
ING1
UBR4
MAP1LC3B2
FAM214B
DHX33
VDR
FCRLB
APBB1IP
UHRF2
YWHAQ
H4C12
FBXO6
PIM3
LTA4H
ATP11A
SPRING1
RNFT2
HDDC3
PEX5
C15orf62
PLEKHM1
GDPGP1
CIB1
RWDD1
CNOT2
EVPLL
TM7SF3
GFM2
SREK1IP1
CWC27
STING1
CHD9
TBP
PSMB1
UBC
HSD17B7
CLIC4
CCNL1
POLG
ENO1
AHCYL2
TMBIM6
ZYX
CDC42EP4
MFN2
DNAJB2
NOTCH1
RBPJ
KMT5A
MLEC
BCAT1
ZNF317
PRSS57
SCAP
SMAD3
TPD52L2
TBL2
KDM3B
TRIM14
SAT1
MAPK8
SLC25A15
NKG7
DYNC1I2
HMGN4
B2M
DNAJB12
OGA
GCDH
MRPL24
FCN1
ERLIN2
EIF3G
COMMD4
PGLS
MRPS23
RAD54L2
THEM4
FOXP1
VAV1
PSMF1
ALDH3B1
PTPN7
ZNF121
MTRNR2L10
SETDB1
OTUD7B
MAD1L1
SCAMP4
ADAT3
RFFL
PGPEP1
PEX14
SLC35E2B
CYB5R4
MDM2
ZFAND3
NCOA7
PARP2
DAGLB
ANKRD33B
ARPC1B
LFNG
PRDM10
PTP4A2
PHETA1
CCL3
ZNF350
DUSP11
RNF139
WDR18
RPL22
CXCR3
OSM
CRACR2B
PHLDB1
PSMD1
NUTF2
CENPT
TMEM41B
GIT2
EIF1AD
BANF1
GGPS1
ARID4B
BAG6
APOM
STX18
SH3BGRL3
SLC25A18
MTMR4
PA2G4
MFSD8
ABHD18
SYT7
PLD6
IPO4
CDC42EP3
NOTCH2
CD63
RBM7
C11orf71
SH3RF3
PNO1
TRIP4
UGP2
RAB20
C7orf26
ANPEP
SUSD1
EMC8
COX4I1
ST3GAL2
RIPK1
SH2D3A
LNPEP
NMNAT1
LZIC
TRIB1
GLUL
STRIP1
TRIM38
THRA
RASSF4
CFLAR
ATP5MF-PTCD1
ATP5MF
CLDN12
EXOC2
PHF12
DBP
GBA
GHRL
ZNF503
TES
ANAPC5
U2SURP
NDRG1
SIDT2
ZNF775
BCL3
DENND5B
NBAS
PKM
USP36
PRELID3B
BSDC1
WT1
PGD
AZIN1
EEA1
PDPR
SYK
TMEM167B
CAST
DOK7
RCOR3
SIRPB2
ABT1
LGALS9B
INHBE
SEPTIN2
HDLBP
LPXN
CCDC130
ETV6
ZNF609
RBP4
PROSER1
NHLRC3
RASSF5
REPIN1
ZNF862
PRXL2B
RAP2A
DYSF
USP8
HEXA
SLC25A16
CASP9
CDKN2D
TMTC3
CEP290
KDELR1
CCDC146
LPAR2
CSRNP1
MIDEAS
ZNF652
NEK2
SKA1
GTF2B
SF3A3
RRAS
ZNF577
MFSD10
PPP3CB
FAAP24
CEP89
LONP2
ABCC11
NUF2
PEMT
HMX3
ARSG
SLC16A6
PRCC
QPCT
DDX23
DRG2
HELZ
WASHC2A
SLC41A3
TFAM
EBAG9
POM121
DOK3
SLC22A15
C11orf24
NDUFAF3
DALRD3
PLAUR
MRPS17
KBTBD6
CYP1A1
ABHD2
SIRT1
SLC3A2
MRPL4
ITGB2
NT5C2
CES1
SOD2
CD164
ZNF318
LAMP1
RNF168
ACAT2
LYSMD2
PLBD2
FZD5
AMN1
PTRHD1
CENPO
OCIAD1
ASS1
WTAP
IGF2BP3
COQ10A
RNASEH1
GGH
PFN1
SH2D4B
USPL1
HMGB1
C1RL
RPLP0
PPARGC1B
CD79A
SNRPB2
NHLRC4
ARMC1
ITPR2
MFSD14A
UPP1
ZNF212
EFCAB14
DDIT3
CCDC186
ARID2
COX19
EIF4EBP1
PLEC
NUDCD1
SHLD2
GLUD1
TPCN2
ZNF385A
CCDC90B
SH3TC1
PXYLP1
THUMPD3
MTMR6
DUSP14
CDK17
SPOCK2
SPI1
N4BP2L1
ANXA2
YTHDF2
GGA1
AIF1
RPP14
HTD2
TRIP6
RFESD
DPH1
CDYL
GALK2
COPS2
SMG8
SNAPC3
FBXO31
MAP1LC3B
TRAPPC10
NR2C2
ZNF337
VIRMA
UNKL
ACSS2
POLD3
SCP2
ARID5A
CCDC114
SLC22A4
HEXIM1
MXI1
DHCR7
PCCA
RPS12
CD55
UBE2Q2
P4HA1
SH2D3C
CAB39
NOLC1
AQR
SERPINF1
RETN
TMEM248
PDSS2
DDIT4
ZFP1
FAR2
C2CD5
PCTP
TXNRD1
ADORA2A
MAD2L1BP
NEK6
INTS6
ARL8A
VPS50
RAB44
HEPACAM2
CHI3L1
ZCCHC3
MACROH2A1
CLK2
EDEM1
DHRS12
RALB
RPF2
TTLL9
MAST2
SAMD10
SLC25A36
CYTH1
NUDT9
LRRC25
TTC26
NPAS1
NBPF1
ATP23
CREB1
CLUH
REL
ATP2A2
TUBA4B
TUBA4A
POR
GSTO1
SLC35C1
HECTD1
CD244
TARS2
UNK
ITGAL
NBPF15
CYP20A1
WDR48
SCN11A
SLC26A11
NDUFB6
KRR1
ESYT2
NPRL2
CYB561D2
ZNF687
SCNM1
LYSMD1
TMEM242
NRIP3
CLDND1
ARHGEF2
ELOVL3
FOXD2
SEC61A1
SFMBT2
NIBAN2
TRIM25
STK38L
FNDC3B
TUBGCP3
PLK3
DCK
CDC37L1
NR3C1
QTRT2
CCDC191
PACRGL
BOD1L1
SLC24A1
TMA16
S100A9
SDE2
PIP4K2B
DCAF8
INTS10
MEPCE
HEATR5A
DYNC2I1
PIDD1
USP35
KCTD21
PYROXD1
PLAC8
HIPK1
SRXN1
YES1
FBXW4
RBM28
SLMAP
TIMM23
MDK
THYN1
ACAD8
ZNF3
AKAP9
MC1R
CRLF3
KNSTRN
LMBR1
DCTN1
IPO13
CITED2
LOC100289561
UBALD1
ZNF335
RABL2B
RABL2A
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
SUDS3
DYNC1LI2
NUP85
PSMG2
CEP76
VDAC2
HSPA9
EFTUD2
CCDC103
VTI1B
NVL
NUP205
RPL21
POLR2E
TBCK
AIMP1
NCLN
GOSR2
MRPS7
GGA3
C19orf48
ATP5MG
STAM2
EXOSC5
BCKDHA
REXO1
STAM
SRD5A1
NSUN2
HADHB
HADHA
SKP1
TSNAX
SEC61B
FARSB
BLCAP
TSN
LYRM4
FARS2
UPF2
IRGQ
SLC35B1
ZNF576
PES1
ACTR10
PAK1IP1
C6orf52
CAPRIN1
DPH6
TTC8
PSMD12
GOLGA5
COX7A2L
SUPV3L1
ISCU
VARS1
RPS23
ATP6AP1L
TMED1
MRPS5
IQCG
ZRANB2
SMC2
PI4KB
ANAPC7
RPL35A
SART3
PDAP1
BUD31
EIF4ENIF1
PCBP1
SELENOF
HS2ST1
MRPL11
NEUROG2
USP1
ADK
AP3M1
ICE1
FAM104A
C17orf80
UFM1
RABGGTB
XPNPEP3
ST13
SF3B3
COG4
RPS27A
CLHC1
NEUROG3
OSGEP
APEX1
TM9SF1
PAF1
MED29
COMMD1
CCT4
HES1
DDX39B
PTGES2
UBE2I
RPS29
LRR1
PIN4
NDUFA10
VEZT
FGD6
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1