ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
MRPS28
ING1
PXYLP1
NDUFS7
CBX5
HNRNPA1
OTUD7B
RBKS
BABAM2
CNOT2
POLD2
ZBTB7C
RARG
GATD3B
GATD3A
SMARCD2
KANSL3
ZCCHC24
GPRC5A
ATXN1L
REEP6
PCSK4
WDR7
CLK1
TAF1A
PKN2
HORMAD1
DONSON
METTL3
TUBB
MTRNR2L2
RAE1
FLOT1
DYNLT1
ZFP36L1
ZGPAT
ARFRP1
KDM3A
WDR74
CCDC174
NANP
MBD2
LOC114841035
FKBP2
STX18
RASA4
MTRNR2L8
ASNSD1
ASDURF
MAMLD1
RASA4B
EIF5
MAML3
GPR108
CTF1
NR2C1
NUDT15
UQCR11
USP42
BACE2
SKIDA1
IMPA1
ZNF395
RARA
C19orf12
LIPA
UROS
BCCIP
KLK10
PTGES3
HECTD4
TRIP12
FBXO36
USP1
CTBP2
FAAP24
CEP89
TRMT1L
SWT1
CLCN3
TMEM241
STAT2
PMPCB
MIGA1
DUS1L
CASP9
CYB5R4
SNRPA
C19orf54
ATP6V0B
FKBP14
MRPS31
ANKS1B
CFAP69
SLC29A2
PPP2R5A
PPP1R13B
FOXP1
INTS5
NCOA7
TRABD
TEX264
MED9
USP37
CNOT9
RPL37
PDCL
CBR4
SMIM20
UQCRC2
FXYD3
RNF207
SREBF1
NCLN
BAZ1B
ALDOA
SEPTIN2
HDLBP
TSPAN10
NPLOC4
KMT5A
SLC25A16
FKBPL
DRG1
SZT2
MED8
SERTAD2
GMNN
METTL25
CCDC59
COLEC11
RASAL1
RNF121
LOC100133315
CHCHD1
TECPR1
MELTF
GCN1
SENP8
MYO9A
ST8SIA6
NPNT
MINDY3
SH3YL1
ACP1
RNF220
RGPD2
RGPD1
NEURL2
CTSA
AARS2
MRPL54
TP53INP2
BAG6
APOM
SH2B1
ADAM17
ABHD3
PARP9
DTX3L
MTRNR2L9
AFF1
HBP1
SLC11A2
ROGDI
C12orf73
RPS3A
TNPO3
TDRD3
CCL28
SOD2
WTAP
MYADM
GDPGP1
CIB1
RPL5
KLHDC2
FDXACB1
C11orf1
SIPA1
MRPS16
DNAJC27
ATXN2
SCNM1
LYSMD1
MKRN3
PCCA
RIMS1
EXOSC4
TTK
SERPINI1
PDCD10
PCTP
CDKN2D
RPS19
DBP
SAMD12
SPIN1
KBTBD3
AASDHPPT
EPM2A
ENTPD5
BBOF1
ZNF133
VARS1
NAA40
TLR5
BRD2
NOTCH1
RNASE4
ANG
FABP5
MBD6
CGGBP1
C3orf38
ADH1C
ACYP1
ZC2HC1C
CCDC200
RBM19
SLC30A4
CEP70
SRCAP
LOC730183
MINDY2
UBE2V2
TAF6L
SLC39A9
ERH
ARIH2
DHRS3
MDM2
SEC24C
DZIP3
CIP2A
ARID4A
ZNF746
DUSP4
CLK2
BCO2
LCN2
HDAC9
ZNF384
KAT6B
AP1B1
TRIM38
ZNF77
ETFRF1
CFAP94
TMED10
NEPRO
SKIV2L
NELFE
ESRP1
AP2M1
ABHD14B
CD46
PRUNE1
MINDY1
ACSS3
STAM2
SNX12
SMPD2
PPIL6
TBC1D22A
KCNQ4
FDX1
KLF5
OTUD5
MIEN1
ANXA7
ALKBH7
DPP9
URGCP
IFT22
URGCP-MRPS24
POMP
DNAH14
MACROH2A1
ZNF85
ZNF318
SCAP
GBA
LEKR1
LSM8
HGH1
ECH1
LETMD1
TXNDC11
SPAG16
GPATCH8
SLC25A35
IVNS1ABP
LARP1
ADA
SEC23A
OSGIN2
HNRNPA1L2
DTX3
SP2
LRRC1
RPS8
MRPS33
DYNLL1
SRSF9
CCDC102A
PIM3
TRIM26
INPP5K
AKTIP
GRK6
DKC1
SYS1
ANAPC15
SMAGP
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
ADM
SLC22A4
SLC25A53
RPL34
KBTBD2
MRPS36
POLDIP3
PRR3
GNL1
ATP6V0E2
B4GALT6
TBC1D8B
LRRC61
ACTR3C
RNGTT
CEP78
ESR2
MCOLN1
CCDC71
CYP4F11
NFKBIA
LEO1
TP53INP1
ACBD3
TAOK3
CXCR4
WWTR1
CNDP2
HEXIM1
ZXDC
ZNF492
ZNF446
CAND1
HIC1
LUC7L2
IQANK1
FAM83H
FAM3C
EXD2
PRKD2
MAP4K5
ATL1
FSTL3
C12orf65
KCNS3
XRCC6
DESI1
UFD1
CDC45
SRSF2
MFSD11
TRAM1
PSMA3
C16orf70
DNAJA2
PAXBP1
FAM114A1
SEC61B
KMT5C
GBF1
MYL12B
ENOX2
IRF9
AXDND1
STK11
TMPRSS12
SUDS3
COX5A
MT2A
PCBP2
NEK2
NUDT17
PLBD2
SBNO1
CSTB
SCYL3
PCDH1
CCDC120
PEX2
PRKACA
BAG2
FZD4
BBS9
ST3GAL4
CLK4
LMF1
SOX8
DDX1
RBM7
C11orf71
MPZL2
TRAPPC6B
SMG5
PELI2
AASDH
SLC3A2
IRX3
TENT2
THAP7
SLC38A1
ZFP41
ZBTB44
ZNF563
OSBPL1A
DHX35
EPHA7
CALM2
SRSF3
ACADM
C2orf73
MRPL34
GOPC
ABHD8
RPS9
POLR2B
SIRT4
PLEKHG3
OSR1
LRRC59
MFSD8
ABHD18
CRNKL1
CFAP61
FMC1-LUC7L2
FMC1
P4HA1
PSMD14
DYRK2
RNF135
NDUFA10
CASD1
CLDN7
RAB11FIP2
LOC391322
SLC9C1
MADCAM1
DSG2
ADRM1
SLC4A2
AGPAT3
CDK5
TOE1
MUTYH
SIKE1
DNAH12
DNAJB1
ZDHHC3
EXOSC7
PRPSAP1
TECR
SLC30A7
LAMTOR5
EXTL2
KRIT1
ANKIB1
CD320
ZNF76
OSER1
MRM1
NLRX1
CCDC9
PPP1R10
MRPS18B
TAF2
SYCP2L
ZNF891
ZNF10
SH2D3A
RNF168
DDX5
CEP95
SNRPF
ZNF69
CYB5A
LTBR
MAPT
DTNB
RPL23
WARS2
EFS
HUS1
UFSP1
SHPRH
DHCR7
WDR81
ENOSF1
LRRCC1
GPRIN2
GFM1
ZNF572
SYPL1
DYM
COP1
C2CD4D
PRELID3B
BLVRB
SPTBN4
ZNF484
CCDC130
AMER1
ZBTB45
NUP85
POLRMT
HNRNPLL
OBP2B
TXNRD1
SEMA3E
ELP6
CTNNA1
SNX3
PNKD
KLHL7
SRSF5
ADCK1
DCAF10
CCDC38
AMDHD1
EBAG9
COMMD3-BMI1
COMMD3
SLC25A6
TAF12
PPIL2
GSPT1
WDR43
MDH1B
FASTKD2
NIBAN2
TMEM209
PAK4
SRSF7
NOD1
CRY2
DENND6A
GXYLT1
CDK13
SIK3
ANKRD50
THUMPD3
CYB5R2
DDT
DDTL
MARVELD3
RUFY1
POLR3B
MDP1
HES4
ZNF506
KHNYN
CBLN3
GOLT1A
PNISR
REL
UQCRH
LRRC41
HINT3
ZNF675
RFLNB
GSE1
CTR9
ITGB3BP
EFCAB7
FOXJ3
GABPA
ATP5PF
MRPL36
PLPP2
DMAP1
C1GALT1
LOC100421372
HSPA14
CDNF
MAIP1
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
IPO13
RWDD1
DYNC1LI2
PSMG2
CEP76
VDAC2
HSPA9
EFTUD2
CCDC103
VTI1B
NVL
NUP205
RPL21
POLR2E
TBCK
AIMP1
GOSR2
MRPS7
GGA3
DCTN1
C19orf48
ATP5MG
EXOSC5
BCKDHA
REXO1
STAM
SRD5A1
NSUN2
HADHB
HADHA
SKP1
TSNAX
FARSB
BLCAP
TSN
LYRM4
FARS2
UPF2
IRGQ
SLC35B1
ZNF576
PES1
ACTR10
NDUFA4
PAK1IP1
C6orf52
PNO1
CAPRIN1
DPH6
TTC8
PSMD12
GOLGA5
COX7A2L
SUPV3L1
RBBP5
ISCU
RPS23
ATP6AP1L
TMED1
MRPS5
IQCG
ZRANB2
SMC2
PI4KB
ANAPC7
RPL35A
SART3
PDAP1
BUD31
EIF4ENIF1
PCBP1
SELENOF
HS2ST1
MRPL11
NEUROG2
ADK
AP3M1
ICE1
FAM104A
C17orf80
UFM1
RABGGTB
XPNPEP3
ST13
RPS12
PROSER1
NHLRC3
SF3B3
COG4
RPS27A
CLHC1
NEUROG3
OSGEP
APEX1
TM9SF1
PAF1
MED29
COMMD1
CCT4
HES1
DDX39B
PTGES2
UBE2I
RPS29
LRR1
PIN4
VEZT
FGD6
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1
TAF9
RAD17
AK6
PMAIP1
SUCLG1
HOXA4
ATOH1
NEUROG1
EIF2S3
SEC11C
RPL7
RDH10
STK36
RNF25
BNIP3
BICRA
IGFBP2
SKIL
GADD45GIP1
OAZ3
HOXA2
CNPY2
GTF3C4
DDX31
PCBD2
NBAS
PDHX
APIP
CDC73
RPN1
ANKLE2
C16orf91
ID2
ZNF383
PRUNE2
GORAB
ST18
TLE4
TPRA1
SP5
RBPJ
ANK2
PDHB
INSM1
CLGN
GATA4
TMEM70
MALRD1
TLE2
MYRIP
ALKBH5
MRPL38
RBBP7
GADD45G
GRSF1
ARSG
KAZALD1
NR2F1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
KMT2A
PRDM12
ZFHX4
RASSF2
HOXB4
INAFM2
DUSP6
BFSP1
TMPPE
GLB1
SPCS1
GLT8D1
SPATC1L
RNF149
SH3BP2
UPF3A
METTL11B
HOXA3
RGS12
ZNF608
LPIN1
CBX3
LIN28A
CS
RPS10-NUDT3
RPS10
HSPA1B
ARID5A
NEO1
HEXIM2
ZFHX3
PARK7
DSCAML1
TIGD1
EIF4E2
NELFA
CCPG1
C15orf65
RPS6KA1
SEC14L1
SRSF11
LRRC40
C11orf24
KCNAB2
ARHGAP24
RAI14
HNRNPD
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRHL3
HOXC5
SLCO4C1
CCDC88A
ID1
SPECC1
ARHGEF10L
NADK
FGR
BRWD1
STK38
KLF17
FGFRL1
NBEAL2
NKD1
VOPP1
BIN2
NCOA2
MTMR4
CDCA7L
DIAPH1
NBPF1
USP15
CAMTA1
WNT10B
POR
MEF2C
CABIN1
LNPEP
CPSF4L
DDX3X
DENND2D
CDC42EP3
RSRC1
DIAPH3
RUNX1T1
PRDM10
IQCH
AAGAB
REC8
HEBP2
ZCCHC3
TBC1D8
CD38
VAV1
TRAF4
OTX1
ATP23
CMTR1
PCNA
POLR2J3
RASSF5
SPACA1
HES3
CLDN2
IQGAP2
PPIB
SLC9A1
PDPN
PLCB2
RYBP
SHB
NKIRAS1
PEX14
H6PD
YTHDF2
IFRD2
FAM110A
NDFIP2
PRDM1
HESX1
CFD
TLE6
SLC35E2B
PLEKHO2
TBRG4
NR1D2
CCDC114
JAK3
CYCS
RNF139
SH3TC1
SP7
POLR3A
ZDHHC4
CEP41
HMGCS1
GTF3A
CBWD5
CBWD3
PIK3AP1
CLIC4
BNIP2
ZNF740
CSAD
KCTD6
ADCY7
HNRNPA2B1
PRSS56
AKIRIN1
KIF26A
DGKZ
SLC35E2A
CBFA2T3
HOXB3
PDE4D
TMEM222
NOTCH2
FAF2
PKM
C12orf29
SRPRA
HES5
RBL2
FCHSD2
SSX2IP
KIF21B
CTTN
USP3
ZNF341
SNAPC3
CD164
TBX2
TRMT6
MCM8
SLC39A13
CSRNP1
MRPS24
TRERF1
ANKRD13D
RMND5A
ARHGAP4
UNC13D
TTI2
PIP4P2
LAPTM5
MAP2K1
CENPH
CLTC
RFESD
ZNF25
VANGL2
MTCH1
MAD1L1
KCNH2
SLC10A2
IL21R
PPCDC
DGAT2
THRAP3
RNF125
RASGRP2
ARHGEF1
PEAK3
ZNF503
GFRA3
ATG16L2
RAD50
PKDCC
EIF4H
CDX1
ZSWIM6
LRIG3
ZBTB17
PSMD3
PIKFYVE
HECTD3
ARL4A