ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584306 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◣ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2A
PSMD1
NME6
RABL2B
MAPKAPK5
SUDS3
RWDD1
CACTIN
POLR3F
DZANK1
VDAC2
DYNC1LI2
NUP85
IPO13
NUP205
HSPA9
VTI1B
PSMG2
CEP76
GOSR2
RPL21
POLR2E
NVL
SEC61B
C19orf48
ATP5MG
NEUROG2
TBCK
AIMP1
FARSB
EFTUD2
CCDC103
ACTR10
EXOSC5
BCKDHA
MRPS7
GGA3
STAM2
HADHB
HADHA
REXO1
IRGQ
ZNF576
PAK1IP1
C6orf52
PNO1
DCTN1
SKP1
SRD5A1
NSUN2
BLCAP
STAM
PES1
CAPRIN1
TSNAX
LYRM4
FARS2
NCLN
TSN
SUPV3L1
ISCU
SART3
UPF2
ANAPC7
RPS23
ATP6AP1L
COX7A2L
IGFBP2
MRPL11
ZRANB2
SF3B3
COG4
VEZT
FGD6
NEUROG3
PCBP1
XPNPEP3
ST13
IQCG
RPL35A
TTC8
GOLGA5
VARS1
RPS27A
CLHC1
NDUFA4
SLC35B1
PDAP1
BUD31
ADK
AP3M1
RABGGTB
DPH6
PI4KB
RPS12
SMC2
EIF4ENIF1
RBBP5
PSMD12
NBAS
UFM1
TMED1
HES1
SELENOF
HS2ST1
MRPS5
MALRD1
ICE1
FAM104A
C17orf80
USP1
RBKS
BABAM2
UBE2I
OSGEP
APEX1
INSM1
BNIP3
DDX39B
ATOH1
PAF1
MED29
TM9SF1
C16orf91
PROSER1
NHLRC3
PRDM12
PIN4
PTGES2
HOXA4
BAG6
APOM
RPS29
LRR1
TAF9
RAD17
AK6
NDUFA10
BICRA
ANK2
BFSP1
TLE4
RBBP7
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1
SUCLG1
RAI14
KIF26A
COMMD1
CCT4
PMAIP1
EIF2S3
SLC7A5
TPRA1
HOXB4
PDHB
GTF3C4
DDX31
RGS12
GADD45GIP1
STK36
RNF25
CNPY2
SPACA1
RPL7
RDH10
SEC11C
DDX3X
CAMTA1
PCBD2
ANKLE2
DSCAML1
CLDN2
GFRA3
RPN1
HES3
SLC10A2
ZNF383
HOXD3
SKIL
ID1
PDZRN3
NEUROG1
CEP41
PRUNE2
KIF21B
PDHX
APIP
OAZ3
PAX3
HES5
GTF3A
CDC73
PDPN
LPIN1
VOPP1
ZFHX4
CPSF4L
CLEC18C
ALKBH5
KLF17
GFER
PLEKHA5
LRIG3
TNC
NEDD9
GORAB
CLGN
DHX32
METTL11B
TBC1D8
PNKD
GFRA1
OR8J1
GADD45G
UPF3A
LIN28B
OTX1
ARHGEF28
BRWD1
CBX3
AXDND1
HSPA1B
ZGPAT
ARFRP1
TMPPE
GLB1
RPS10-NUDT3
RPS10
TIGD1
EIF4E2
JAKMIP1
HOXC5
LIX1
MEIS3
PPP2R5A
ST18
PDE12
HOXA3
ZBTB25
ZBTB1
ZNF746
KAZALD1
POLR3A
MEF2C
MYRIP
ZNF608
EIF4E3
DHRS3
TRIM71
ATOH8
TLE2
ZNF341
NNMT
NR2F1
PHOX2B
RARA
TAGLN3
TCF4
CEMP1
RAN
MUSTN1
CS
KMT2A
FRRS1L
HNRNPA2B1
ZFHX3
CER1
FABP5
FHL1
RYBP
WBP1L
TRAP1
SLC39A6
ELP2
MTMR7
MRPL38
MEPCE
ZCWPW1
RCOR3
NELFA
CPLX1
LIN28A
HNRNPD
AJUBA
SPCS1
GLT8D1
SYTL2
LDLRAD3
REC8
FAM124A
CCDC200
PAX7
ARHGAP24
KEAP1
BMPR1B
STOML2
HOXA2
COX5A
POU2F1
TFDP2
DNMT3B
ITPRIP
CHD8
CLEC18B
KDM1A
EIF4H
CATSPERB
FGFR4
TPO
CNN3
TMEM70
SRSF11
LRRC40
FOXO3
HOXC6
TRDMT1
PLEKHA6
ADM
TBL1XR1
CPVL
CHN2
RCOR1
SP8
RBPJ
DGKZ
CCDC169-SOHLH2
CCDC169
MECOM
QPRT
IPO11
CIAO2A
PEX2
DICER1
CCDC198
TRIM2
HEY1
CCDC107
TRAF3IP2
SH2B1
HECTD3
GIGYF1
HSD17B8
WDR74
ABAT
ALPK3
ACOT6
BBS9
ATP5MC2
LRRC8C
SOX11
PKDCC
ZNF853
SERPING1
PANK2
BCO1
NKIRAS1
NR1D2
PIPOX
DRAP1
C11orf68
CCDC43
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HOXB3
USP17L22
USP17L20
SPOCK2
MSI2
TCHP
RARB
DUSP6
CDX1
KMT2B
RFFL
VXN
ARHGEF1
CALHM6
P2RX6
ADAMTS10
PTCH2
SPTBN1
DTNB
MTF2
SOX6
PAX6
SYBU
NEDD4L
ZNF593
C1orf232
ZNF891
ZNF10
WRAP53
COL5A2
FGFRL1
PRM3
IDUA
KAT6B
ACCS
TPST1
AGPAT4
ROBO3
ELOVL6
CENPBD1
IKZF4
FAM181A
NCALD
EFNB1
KRT9
NEO1
RPS24
PPP1R3D
FAM217B
IRS2
CCN2
LMX1A
DUSP2
CETN1
LPAR3
G0S2
CSTF2T
FERD3L
ACVR1
MAD2L2
ASIP
DRAXIN
CSNK1A1
H3C12
NPAS4
GCK
NCOA2
KAZN
H3-3A
PTPRZ1
DLC1
CASC3
SOX12
TXNIP
RBMS3
POLR1D
LNX2
KDM3A
BRI3
CMTR1
CEP63
ANAPC13
ZFAND4
RXYLT1
PRTG
ELAPOR2
NDUFS7
DENND1A
NCAM1
KLB
RIN2
SPIN1
MGST1
PCDH18
C12orf42
FGD4
DYRK1B
CDIP1
RPS7
LZTFL1
KCNJ13
RBM25
VANGL2
HES4
PAH
ASCL1
SELENOP
USP17L15
NUP93
ETV1
HABP4
SP5
TTI2
DLX4
ZNF587
DGAT2
KDM4C
SASH1
SPHK2
RPL18
MPZL2
CELSR3
RIMBP2
DLG2
PHACTR2
AKIRIN1
DONSON
MFSD3
YAP1
TBPL1
GAS7
SGK3
GRWD1
WDR47
POLR2J3
PEX14
GATD3B
GATD3A
HOXB5
GPRC6A
GCSH
NFIX
TRIM41
FOXP1
RAPGEF4
RSRC1
RNF138
CXCL6
FAM162A
CCDC58
PLXNB1
GUK1
HMX3
ZNF423
NAALAD2
ZSWIM2
KAT6A
SECISBP2L
CBX5
LMNA
MEX3A
LTV1
NDUFB3
FAM126B
NAT10
GAS2L3
CCNO
SEMA4B
PODXL
LIMCH1
PRSS47
UBR5
GGA1
C15orf61
SOX5
MYH3
STRA6
CLASP2
ANKRD6
NEBL
WFIKKN1
ID2
GATA4
GPR108
GRSF1
ARSG
RASSF2
MRPL34
FLOT1
INAFM2
SPATC1L
RNF149
SH3BP2
MBD2
HUS1
ARID5A
HEXIM2
PARK7
MTRNR2L2
CCPG1
C15orf65
RPS6KA1
SEC14L1
C11orf24
KCNAB2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRHL3
SLCO4C1
CCDC88A
SPECC1
ARHGEF10L
NADK
FGR
STK38
NBEAL2
NKD1
SKIV2L
NELFE
BIN2
MTMR4
CDCA7L
DIAPH1
ZNF76
NBPF1
USP15
WNT10B
SNX3
POR
CABIN1
LPCAT3
MTRNR2L8
LNPEP
DENND2D
CDC42EP3
CCDC174
DIAPH3
RUNX1T1
PRDM10
IQCH
AAGAB
NFKBIA
HEBP2
ZCCHC3
CD38
VAV1
TRAF4
ATP23
PCNA
RASSF5
ING1
EXOSC4
IQGAP2
PPIB
MINDY2
CNOT2
SLC9A1
OTUD7B
PKN2
PLCB2
SHB
H6PD
YTHDF2
SMARCD2
IFRD2
FAM110A
PCTP
NDFIP2
PRDM1
HESX1
CFD
TLE6
SLC35E2B
PLEKHO2
TBRG4
CCDC114
JAK3
CYCS
RNF139
SH3TC1
DYNLL1
SP7
ZDHHC4
HMGCS1
ARIH2
CBWD5
CBWD3
LTBR
DPP9
PIK3AP1
CLIC4
BNIP2
ZNF740
CSAD
SOD2
KCTD6
ADCY7
PRSS56
SLC35E2A
KANSL3
CBFA2T3
PDE4D
TXNRD1
PTGES3
NR2C1
TMEM222
NOTCH2
FAF2
PKM
C12orf29
SRPRA
RBL2
FCHSD2
SSX2IP
CTTN
PXYLP1
USP3
ATXN1L
SNAPC3
CD164
TBX2
TRMT6
MCM8
SLC39A13
CSRNP1
BAZ1B
MRPS24
TRERF1
CALM2
ANKRD13D
RMND5A
RARG
ARHGAP4
UNC13D
PIP4P2
LAPTM5
MAP2K1
CENPH
CLTC
RFESD
ZNF25
USP42
MTCH1
MAD1L1
KCNH2
IL21R
STX18
PPCDC
THRAP3
RNF125
RASGRP2
PEAK3
MRPS31
ZNF503
ATG16L2
RAD50
EPM2A
ZSWIM6
ZBTB17
PSMD3
PIKFYVE
ARL4A
SBNO2
SDE2
FBXO41
RWDD2A
PGM3
MAPRE2
SMPD1
MAPKBP1
RXRA
WTAP
ZNF414
STRADA
CBWD6
ERLIN2
ASNS
MAGEF1
ZNF318
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
NIBAN3
USPL1
HMGB1
MC1R
FXYD2
UBL7
C1orf159
ATAD3B
MAST2
FAM120B
OR2L13
DYNLT1
NGRN
PHF19
MCU
BUD13
TIGD5
EEF1D
VPS37C
RER1
MORN1
TUBB
RNF103-CHMP3
MAPKAPK3
CISH
NIBAN2
IFNGR1
ARF3
GPATCH8
C18orf32
NCBP2AS2
NCBP2
UPP1
USP21
CYB5R4
GABRB2
ATAD3A
CNOT6
KIF1C
INCA1
METTL25
FAM227B
DTWD1
DDX23
CCDC59
TDP2
BHLHE40
ACOT13
RAP1GAP2
YY1AP1
DAP3
C12orf65
HPF1
ADAM17
NINJ2
ACOT2
PCMT1
SLC35E3
KMT5A
SPDYE14
SPDYE10P
NMNAT1
LZIC
SYPL1
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
ARHGAP45
TSPAN4
POLR2L
SEH1L
NUDT15
CEP135
CCNL1
ASB1
NANP
MYCBP2
CACYBP
GSPT1
PTDSS1
MTERF3
SERTAD2
MT2A
LSM5
AVL9
UNK
EIF3D
MTMR1
CDS2
MFN2
ATG5
HYLS1
LTB4R
C21orf91
ZNF219
LANCL2
RPLP1
RITA1
DDX54
APBB1IP
TBX3
CTSC
HOXC4
ADORA2A
KRI1
DISP3
ASH1L
ZCCHC24
SNUPN
PSMF1
HMGCL
EIF5
GTF2H3
EIF2B1
DLX2
TLE3
USP34
TRAM1
UBIAD1
SP2
SLC16A6
THUMPD3
MAPK6
IMPA1
CD63
FNTA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PDZD2
NAA40
MBD6
ARF4
ZFAND2A
MKRN2
LAMP1
CARMIL1
NOC4L
DDX51
IL6R
TAS1R1
NOL9
PTK2B
NREP
ARHGAP27
BRAP
ACAD10
RPS3
EIF1B
FKBP1A
RPL8
DUSP4
CHST11
LONRF3
HNRNPF
PGD
ATG101
TMEM65
PGLS
TKFC
DDB1
DNAH7
MDM2
RIMBP3
GARS1
ZNF395
GFUS
LCOR
FAF1
CNPY3
SGK1
BOD1L1
SUPT4H1
SMIM20
DNAJB2
TMEM199
POLDIP2
FKBP5
GALE
DYNC2H1
CDC42
POLD2
PPIL4
SPRY2
DENND4B
SMG6
GPCPD1
EHD1
DHRS4L2
NCKAP5L
MRPL20
CXXC4
RERE
C6orf89
SNAPC5
PPP4R3B
B3GALNT2
CASTOR2
RCC2
POLG
ABHD12
TBL3
PRKAB1
IPP
RAC2
ZBTB45
NUS1
TPP2
RBSN
TAF12
UBE2K
ZC3H6
FDX1
MACROH2A1
PTP4A2
RNF216
NCBP3
PLEKHM1
CLCN3
FOS
INTS5
THYN1
ACAD8
TMEM41A
RAB11FIP1
DCP1A
SLC35A1
LRRC59
CD93
SPTBN5
CLN5
RGS14
MTCH2
PSTPIP1
NDUFV1
ETFA
MYADM
PPP1R8
ZBTB12
STARD3
HIBADH