ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039037 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◣ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
MAPKAPK5
ZNF335
PSMD1
CACTIN
DYNC1LI2
NME6
POLR3F
DZANK1
RWDD1
SUDS3
VTI1B
PSMG2
CEP76
IPO13
NUP85
EFTUD2
CCDC103
VDAC2
NVL
GATA4
STAM2
HOXA2
LYRM4
FARS2
SKP1
HSPA9
NCLN
GOSR2
TBCK
AIMP1
UPF2
DCTN1
SRD5A1
NSUN2
POLR2E
NUP205
ATP5MG
TSN
REXO1
EXOSC5
BCKDHA
COX7A2L
MRPS7
GGA3
SEC61B
BLCAP
C19orf48
STAM
MRPS5
TSNAX
ACTR10
ICE1
SLC35B1
RPL21
GOLGA5
TTC8
VARS1
PSMD12
PNO1
ARHGEF10L
FARSB
SUPV3L1
HADHB
HADHA
BBS9
PES1
FAM104A
C17orf80
HOXB3
PI4KB
PAK1IP1
C6orf52
EIF4ENIF1
RABGGTB
USP1
ZRANB2
IRGQ
ZNF576
XPNPEP3
ST13
RBKS
BABAM2
ADK
AP3M1
UBE2I
SMC2
ANAPC7
CELF4
UFM1
RPS23
ATP6AP1L
TM9SF1
DPH6
RPS12
RUNX1T1
IQCG
RPL35A
CAPRIN1
NDUFA4
SF3B3
COG4
ISCU
SART3
PCBP1
PAF1
MED29
TBX2
SELENOF
HS2ST1
PROSER1
NHLRC3
DDX39B
RBBP5
SUCLG1
CLGN
MRPL11
TMED1
RPS27A
CLHC1
NEO1
OSGEP
APEX1
NDUFA10
BAG6
APOM
TBX3
NR2F1
COMMD1
CCT4
OAZ3
DMD
HOXC6
HOXC4
VPS13A
ELOVL6
HEXIM2
HOXA4
PTGES2
PDE12
BICRA
MRTO4
EMC1
RSRC1
ANKLE2
HES1
LIN28A
PDAP1
BUD31
STK36
RNF25
EIF2S3
PRUNE2
DIAPH3
CXXC4
CPA1
RPL7
RDH10
ZNF608
PIN4
ZFHX4
MGST1
SKIL
TAF9
RAD17
AK6
RARA
TTI2
P2RX6
CNR1
ASPG
ACKR3
TMEM9
ARHGAP11A-SCG5
ARHGAP11A
ID2
MRTFB
FLVCR1
ZNF503
PPFIA2
HOXB9
COLEC12
TLE2
NIBAN1
ZGPAT
ARFRP1
LIX1
KIAA1217
RPN1
HOXA3
USP34
ZNF587B
FGF7
CNPY2
POLR3A
PKDCC
HOXB8
PPP1R3D
FAM217B
MDC1
CYP26A1
ACVR1
TNP1
RBPJ
NDUFS7
HOXC5
EIF3D
CCDC183
PEDS1-UBE2V1
PEDS1
KDM3A
PCDH18
GABRB2
RPS29
LRR1
DSCAML1
ZBTB18
TXNRD1
GADD45GIP1
HOXA5
PCDH15
SPRR2F
TLE4
CCDC174
PLAGL1
SALL4
ABCC9
ZFHX3
POLDIP3
SEC11C
METTL25
CCDC59
TMSB4Y
POU2F1
CBFA2T2
SH2B1
NBAS
H2BC5
EYA1
CDC42EP3
VANGL2
ZNF383
GORAB
REC8
ECHDC1
CAPN7
FGF8
RAPGEF4
TBX18
SVEP1
IGF2BP3
C9orf153
GTF3C4
DDX31
HUS1
CDC73
CCN2
NELL2
GFRA3
SORBS2
SCHIP1
NNMT
C12orf29
RCOR3
ZNF341
UBA3
ZYX
HEY2
PDGFRA
CDK6
MYLK3
ZNF430
TNFRSF19
ID3
ZP3
NT5C3A
FOXP1
ZNF746
HNRNPD
OTUD4
PBX2
CDH18
RNF207
HOXB5
WDR74
ALKBH5
IRS2
VTN
RCOR1
SYNJ2BP-COX16
SYNJ2BP
VOPP1
MAD2L2
DRAXIN
CACYBP
ANXA11
FHL2
BNIP3
TCF4
MGST2
DUSP6
SHB
CFAP69
CEP70
TRIP12
FBXO36
ESRRG
PCNX4
ZNF853
CDH3
NDUFB3
FAM126B
SERTAD2
MID1
ACYP1
ZC2HC1C
DLG2
ZSCAN30
CS
ITGBL1
OLFML1
SLITRK6
ALPK2
PCBD2
DNAH12
MPPED2
WWP2
TNNT2
BNIP2
IL1RAPL1
CLASP2
ATXN2L
DHRS3
CEP41
SLC25A6
PDCL3
CBX3
HNRNPA2B1
FNDC5
SUPT7L
SLC4A1AP
KAT6B
CELF2
QPRT
SLC28A3
CTF1
GRWD1
ADAMTS3
ELK4
RANBP17
GFRA1
RGS5
PAQR8
DGKZ
SEC24A
DNAJB4
RASSF4
ART5
NEUROG2
NEUROG3
VEZT
FGD6
PMAIP1
ATOH1
NEUROG1
IGFBP2
PDHX
APIP
C16orf91
ST18
TPRA1
SP5
ANK2
PDHB
INSM1
CCDC200
TMEM70
MALRD1
MYRIP
MRPL38
RBBP7
GADD45G
GPR108
GRSF1
ARSG
KAZALD1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
KMT2A
PRDM12
RASSF2
RARB
MRPL34
FLOT1
HOXB4
INAFM2
BFSP1
TMPPE
GLB1
SPCS1
GLT8D1
SPATC1L
RNF149
SH3BP2
AXDND1
UPF3A
MBD2
METTL11B
RGS12
LPIN1
RPS10-NUDT3
RPS10
HSPA1B
ARID5A
PARK7
MTRNR2L2
TIGD1
EIF4E2
NELFA
CCPG1
C15orf65
RPS6KA1
SEC14L1
SRSF11
LRRC40
C11orf24
KCNAB2
ARHGAP24
RAI14
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRHL3
SLCO4C1
CCDC88A
ID1
SPECC1
NADK
FGR
BRWD1
STK38
KLF17
FGFRL1
NBEAL2
NKD1
SKIV2L
NELFE
BIN2
NCOA2
MTMR4
CDCA7L
DIAPH1
ZNF76
NBPF1
USP15
CAMTA1
WNT10B
SNX3
POR
MEF2C
CABIN1
LPCAT3
MTRNR2L8
LNPEP
CPSF4L
DDX3X
DENND2D
PRDM10
IQCH
AAGAB
NFKBIA
HEBP2
ZCCHC3
TBC1D8
CD38
VAV1
TRAF4
OTX1
ATP23
CMTR1
PNKD
PCNA
POLR2J3
RASSF5
SPACA1
ING1
HES3
CLDN2
EXOSC4
IQGAP2
PPIB
MINDY2
CNOT2
SLC9A1
OTUD7B
PDPN
PKN2
PLCB2
RYBP
NKIRAS1
PEX14
H6PD
YTHDF2
SMARCD2
IFRD2
FAM110A
PCTP
NDFIP2
PRDM1
HESX1
CFD
TLE6
SLC35E2B
PLEKHO2
TBRG4
NR1D2
CCDC114
JAK3
CYCS
RNF139
SH3TC1
DYNLL1
SP7
ZDHHC4
HMGCS1
ARIH2
GTF3A
CBWD5
CBWD3
LTBR
DPP9
PIK3AP1
CLIC4
ZNF740
CSAD
SOD2
KCTD6
ADCY7
ADM
PRSS56
AKIRIN1
KIF26A
SLC35E2A
KANSL3
CBFA2T3
PDE4D
PTGES3
NR2C1
TMEM222
NOTCH2
FAF2
PKM
SRPRA
HES5
RBL2
FCHSD2
SSX2IP
KIF21B
CTTN
PXYLP1
USP3
ATXN1L
SNAPC3
CD164
TRMT6
MCM8
SLC39A13
CSRNP1
BAZ1B
MRPS24
TRERF1
CALM2
ANKRD13D
DTNB
RMND5A
RARG
ARHGAP4
UNC13D
PIP4P2
LAPTM5
MAP2K1
CENPH
GATD3B
GATD3A
CLTC
RFESD
ZNF25
USP42
MTCH1
MAD1L1
KCNH2
SLC10A2
IL21R
STX18
PPCDC
DGAT2
THRAP3
RNF125
RASGRP2
ARHGEF1
PEAK3
MRPS31
ATG16L2
COX5A
RAD50
EPM2A
EIF4H
CDX1
ZSWIM6
LRIG3
ZBTB17
PSMD3
PIKFYVE
HECTD3
ARL4A
SBNO2
SDE2
KAT6A
FBXO41
RWDD2A
PGM3
MAPRE2
SMPD1
KEAP1
MAPKBP1
RXRA
CPVL
CHN2
WTAP
ZNF414
STRADA
CBWD6
MTF2
ERLIN2
CASC3
TCHP
ASNS
MAGEF1
ZNF318
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
NIBAN3
USPL1
HMGB1
MC1R
FXYD2
USP17L15
PANK2
UBL7
C1orf159
ATAD3B
MAST2
HOXD3
FAM120B
OR2L13
DYNLT1
NGRN
PHF19
MCU
BUD13
TIGD5
EEF1D
VPS37C
RER1
MORN1
TUBB
RNF103-CHMP3
MAPKAPK3
CISH
NIBAN2
IFNGR1
ARF3
GPATCH8
C18orf32
NCBP2AS2
NCBP2
UPP1
USP21
CYB5R4
DONSON
ATAD3A
CNOT6
JAKMIP1
KIF1C
INCA1
FAM227B
DTWD1
DDX23
TDP2
DENND1A
BHLHE40
ACOT13
RAP1GAP2
FABP5
YY1AP1
DAP3
C12orf65
HPF1
ADAM17
NINJ2
ACOT2
PCMT1
SLC35E3
KMT5A
SPDYE14
SPDYE10P
NMNAT1
LZIC
SYPL1
UBE2L3
SPIN1
RIMBP3C
RIMBP3B
ARHGEF18
ARHGAP45
TSPAN4
POLR2L
SEH1L
NUDT15
CEP135
CCNL1
ASB1
NANP
MYCBP2
GSPT1
PTDSS1
MTERF3
SLC7A5
MT2A
LSM5
AVL9
UNK
MTMR1
CDS2
MFN2
ATG5
HYLS1
LTB4R
TRAP1
C21orf91
ZNF219
LANCL2
RPLP1
RITA1
DDX54
APBB1IP
CTSC
ADORA2A
KRI1
ITPRIP
DISP3
MEPCE
ASH1L
ZCCHC24
SNUPN
PSMF1
HMGCL
GFER
EIF5
GTF2H3
EIF2B1
DLX2
TLE3
KDM1A
TRAM1
UBIAD1
SP2
SLC16A6
THUMPD3
MAPK6
IMPA1
CD63
FNTA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PDZD2
NAA40
MBD6
ARF4
ZFAND2A
MKRN2
LAMP1
CARMIL1
NOC4L
DDX51
IL6R
TAS1R1
NOL9
PTK2B
NREP
ATOH8
ARHGAP27
BRAP
ACAD10
RPS3
EIF1B
FKBP1A
RPL8
DUSP4
CHST11
LONRF3
HNRNPF
ZCWPW1
PGD
ATG101
TMEM65
PGLS
TKFC
DDB1
DNAH7
MDM2
TRDMT1
RIMBP3
GARS1
ZNF395
GFUS
RAN
LCOR
FAF1
CNPY3
SGK1
BOD1L1
SUPT4H1
SMIM20
DNAJB2
TMEM199
POLDIP2
FKBP5
CSNK1A1
GALE
DYNC2H1
CDC42
POLD2
PPIL4
SPRY2
DENND4B
SMG6
GPCPD1
EHD1
DHRS4L2
NCKAP5L
MRPL20
RERE
C6orf89
SNAPC5
PPP4R3B
B3GALNT2
CASTOR2
RCC2
POLG
ABHD12
CIAO2A
TBL3
PRKAB1
IPP
RAC2
ZBTB45
NUS1
WBP1L
TPP2
RBSN
CCDC43
TAF12
PEX2
ZNF593
UBE2K
C1orf232
ZC3H6
FDX1
MACROH2A1
PTP4A2
RNF216
NCBP3
PLEKHM1
CLCN3
FOS
INTS5
THYN1
ACAD8
TMEM41A
RAB11FIP1
DCP1A
SLC35A1
LRRC59
CD93
SPTBN5
CLN5
RGS14
MTCH2
PSTPIP1
NDUFV1
C15orf61
ETFA
MYADM
PPP1R8
ZBTB12
STARD3
HIBADH
DRAP1
C11orf68
MEIS3
ZNF774
MARCHF7
PRR19
PAFAH1B3
ATXN2
SPPL2A
FADS2
FADS1
RBM15B
PRKAG1
ZNF397
SECISBP2L
WDR53
FBXO45
CAP1
MIDEAS
ABCF1
IQSEC1
DTX2
CYP2W1
LGALS1
IDS
RCN2
SCAMP4
ADAT3
SEC13
NOL4L
RAB3D
ARID1A
PURB
FAM3C
MT1G
FOXN2
BIRC2
DHDDS
ADPGK
SPATC1
MVK
EXD1
CHP1
OSBPL3
DBI
C2orf76
UHRF2
SEPTIN2
RNF168
HDLBP
LST1
SLC43A3
TRNAU1AP
TESMIN
SIPA1
RFC2
SLC39A7
RXRB
MRPS28
CLK1
MAP2K3
RNF19A
PDZRN3
ZFAND3
URGCP
PSMD9
HPD
SNX15
RUNX3
NSUN6
ARL5B
SEMA4B
GNA13
TMEM123
ZZZ3
ANKRD36C
PHF13
YARS1
S100PBP
CPQ
ZNF212
RNF34
HBS1L
FBXL18
EIF3B
DLST
ZFPL1
PKNOX1
CDCA5
ABHD2
TMEM230