ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584305 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◣ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

NEUROG2
ZNF335
RABL2B
MAPKAPK5
PSMD1
RABL2A
NME6
HES1
IPO13
VEZT
FGD6
NEUROG3
RWDD1
CACTIN
VDAC2
SUDS3
NUP85
POLR3F
DZANK1
HSPA9
IGFBP2
DYNC1LI2
RPL21
NVL
ATP5MG
EFTUD2
CCDC103
VTI1B
PAK1IP1
C6orf52
TBCK
AIMP1
DCTN1
BLCAP
NUP205
POLR2E
ACTR10
SRD5A1
NSUN2
REXO1
DPH6
SKP1
PMAIP1
C19orf48
NCLN
EXOSC5
BCKDHA
STAM2
PSMG2
CEP76
UPF2
MRPS7
GGA3
SLC35B1
STAM
PES1
TSN
PNO1
GOSR2
HADHB
HADHA
SUPV3L1
INSM1
LYRM4
FARS2
FARSB
SEC61B
ANAPC7
RBBP5
CAPRIN1
SKIL
IRGQ
ZNF576
IQCG
RPL35A
RBKS
BABAM2
PSMD12
TSNAX
TMED1
PCBP1
MRPS5
ISCU
SART3
ATOH1
GOLGA5
NDUFA4
VARS1
SF3B3
COG4
EIF4ENIF1
ICE1
TTC8
PAF1
MED29
MRPL11
COX7A2L
RPS12
PI4KB
SMC2
PDAP1
BUD31
BNIP3
RPS23
ATP6AP1L
OSGEP
APEX1
MALRD1
GADD45G
RBBP7
USP1
HES5
HOXA4
ZRANB2
TM9SF1
NEUROG1
FAM104A
C17orf80
SELENOF
HS2ST1
NBAS
RPS27A
CLHC1
DDX39B
UFM1
XPNPEP3
ST13
ADK
AP3M1
UBE2I
ST18
RPS29
LRR1
CPSF4L
RABGGTB
PDHB
PROSER1
NHLRC3
PTGES2
HOXB4
BICRA
PNKD
BAG6
APOM
CBX3
PIN4
GFER
TAF9
RAD17
AK6
NEDD9
GTF3A
PDPN
RYBP
MRTO4
EMC1
DDX3X
SLC10A2
SOX12
SEC11C
MYRIP
STK36
RNF25
HOXD3
RGS12
KAZALD1
CSRNP1
ARHGAP11A-SCG5
ARHGAP11A
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BFSP1
PRUNE2
COMMD1
CCT4
CCDC200
NDUFA10
METTL11B
GADD45GIP1
PDHX
APIP
TPRA1
TTLL6
RPN1
LPIN1
GFRA3
HNRNPA2B1
TLE4
OTX1
EIF2S3
TIGD1
EIF4E2
SPACA1
RAI14
KIF26A
ZGPAT
ARFRP1
CNPY2
PCBD2
HES3
OAZ3
BRWD1
UPF3A
CLGN
RPL7
RDH10
SUCLG1
CLDN2
CDC73
ANKLE2
SOX11
HNRNPD
RARA
AXDND1
TNC
GTF3C4
DDX31
REC8
WBP1L
TBC1D8
DHRS3
ZNF383
CAMTA1
HOXA3
LIN28B
PDE12
HOXA2
DSCAML1
FGFR4
GORAB
C15orf61
CPN2
ANK2
MAST2
KIF21B
VOPP1
SLC39A6
ELP2
TMEM131L
PRDM12
RBPJ
WDR74
STOML2
TMPPE
GLB1
RADIL
PIPOX
QPRT
KLF17
ZSWIM6
CPLX1
HMGN1
ZNF746
OR8J1
LZTFL1
DHX32
CEMP1
CPVL
CHN2
SYNE4
TLE2
RPS10-NUDT3
RPS10
POLR3A
EIF4H
ALKBH5
SOX6
FABP5
MTCH2
RNF138
JAKMIP1
ZFHX4
MEPCE
ZCWPW1
TRAP1
TLE6
TLE1
SPOCK2
KMT2A
TBL1XR1
ITPRIP
SPCS1
GLT8D1
H3-3A
KMT2B
NUP210
MEX3B
GREB1
USP17L22
USP17L20
PAX3
MUSTN1
MEIS3
STMN1
HEY1
BBS9
KEAP1
EIF4E3
STK38
TFDP2
HOXC5
YAP1
SERPING1
TMEM70
ADM
HOXB9
CER1
CS
MEF2C
TAGLN3
MEIS2
TCF4
TCF20
IL37
RARB
LIN28A
NKIRAS1
NR1D2
ZFHX3
MARCHF7
SP5
SRSF11
LRRC40
BNIP2
PANK2
PCDH18
LDLRAD3
SEMA4B
ERI1
RPRM
PLEKHA6
CSTF2T
M1AP
DUSP6
ABAT
NELFA
REV1
C16orf91
ID2
GATA4
MRPL38
GPR108
GRSF1
ARSG
NR2F1
RASSF2
MRPL34
SH2B1
FLOT1
NDUFS7
INAFM2
SPATC1L
RNF149
SH3BP2
MBD2
FOXP1
ZNF608
HUS1
HSPA1B
ARID5A
NEO1
HEXIM2
PARK7
MTRNR2L2
CCPG1
C15orf65
RPS6KA1
SEC14L1
C11orf24
KCNAB2
ARHGAP24
KAT6B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRHL3
KDM3A
SLCO4C1
CCDC88A
ID1
SPECC1
ARHGEF10L
NADK
FGR
FGFRL1
NBEAL2
NKD1
SKIV2L
NELFE
BIN2
NCOA2
MTMR4
CDCA7L
DIAPH1
ZNF76
NBPF1
USP15
WNT10B
SNX3
POR
CABIN1
LPCAT3
MTRNR2L8
LNPEP
DENND2D
CDC42EP3
RSRC1
CCDC174
DIAPH3
RUNX1T1
PRDM10
IQCH
AAGAB
NFKBIA
HEBP2
ZCCHC3
CD38
VAV1
TRAF4
ATP23
CMTR1
PCNA
POLR2J3
RASSF5
ING1
EXOSC4
IQGAP2
PPIB
MINDY2
CNOT2
SLC9A1
OTUD7B
PKN2
PLCB2
SHB
PEX14
H6PD
YTHDF2
SMARCD2
IFRD2
FAM110A
PCTP
NDFIP2
PRDM1
HESX1
CFD
SLC35E2B
PLEKHO2
TBRG4
CCDC114
JAK3
CYCS
RNF139
SH3TC1
DYNLL1
SP7
ZDHHC4
CEP41
HMGCS1
ARIH2
CBWD5
CBWD3
LTBR
DPP9
PIK3AP1
CLIC4
ZNF740
CSAD
SOD2
KCTD6
ADCY7
PRSS56
AKIRIN1
DGKZ
SLC35E2A
KANSL3
CBFA2T3
HOXB3
PDE4D
TXNRD1
PTGES3
NR2C1
TMEM222
NOTCH2
FAF2
PKM
C12orf29
SRPRA
RBL2
FCHSD2
SSX2IP
CTTN
PXYLP1
USP3
ZNF341
ATXN1L
SNAPC3
CD164
TBX2
TRMT6
MCM8
SLC39A13
BAZ1B
MRPS24
TRERF1
CALM2
ANKRD13D
DTNB
RMND5A
RARG
ARHGAP4
UNC13D
TTI2
PIP4P2
LAPTM5
MAP2K1
CENPH
GATD3B
GATD3A
CLTC
RFESD
ZNF25
VANGL2
USP42
MTCH1
MAD1L1
KCNH2
IL21R
STX18
PPCDC
DGAT2
THRAP3
RNF125
RASGRP2
ARHGEF1
PEAK3
MRPS31
ZNF503
ATG16L2
COX5A
RAD50
PKDCC
EPM2A
CDX1
LRIG3
ZBTB17
PSMD3
PIKFYVE
HECTD3
ARL4A
SBNO2
SDE2
KAT6A
FBXO41
RWDD2A
PGM3
MAPRE2
SMPD1
MAPKBP1
RXRA
WTAP
ZNF414
STRADA
CBWD6
MTF2
ERLIN2
CASC3
TCHP
ASNS
MAGEF1
ZNF318
RCOR1
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
NIBAN3
USPL1
HMGB1
MC1R
FXYD2
USP17L15
UBL7
C1orf159
ATAD3B
FAM120B
OR2L13
DYNLT1
NGRN
PHF19
MCU
BUD13
TIGD5
EEF1D
VPS37C
RER1
MORN1
TUBB
RNF103-CHMP3
MAPKAPK3
CISH
NIBAN2
IFNGR1
ARF3
GPATCH8
C18orf32
NCBP2AS2
NCBP2
UPP1
HOXC6
LIX1
USP21
CYB5R4
GABRB2
DONSON
ATAD3A
CNOT6
KIF1C
INCA1
METTL25
FAM227B
DTWD1
DDX23
CCDC59
TDP2
DENND1A
BHLHE40
ACOT13
RAP1GAP2
YY1AP1
DAP3
C12orf65
HPF1
ADAM17
NINJ2
ACOT2
PCMT1
SLC35E3
KMT5A
SPDYE14
SPDYE10P
NMNAT1
LZIC
SYPL1
UBE2L3
SPIN1
RIMBP3C
RIMBP3B
ARHGEF18
ARHGAP45
TSPAN4
POLR2L
SEH1L
NUDT15
CEP135
CCNL1
ASB1
NANP
MYCBP2
CACYBP
GSPT1
PTDSS1
MTERF3
SERTAD2
SLC7A5
MT2A
LSM5
AVL9
UNK
EIF3D
MTMR1
CDS2
MFN2
ATG5
HYLS1
LTB4R
C21orf91
ZNF219
LANCL2
RPLP1
RITA1
DDX54
APBB1IP
TBX3
CTSC
HOXC4
ADORA2A
KRI1
DISP3
ASH1L
ZCCHC24
SNUPN
PSMF1
HMGCL
EIF5
GTF2H3
EIF2B1
DLX2
TLE3
KDM1A
USP34
TRAM1
UBIAD1
SP2
SLC16A6
THUMPD3
MAPK6
IMPA1
CD63
FNTA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PDZD2
NAA40
MBD6
ARF4
ZFAND2A
MKRN2
LAMP1
CARMIL1
NOC4L
DDX51
IL6R
TAS1R1
NOL9
PTK2B
NREP
ATOH8
ARHGAP27
BRAP
ACAD10
RPS3
EIF1B
FKBP1A
RPL8
DUSP4
CHST11
LONRF3
HNRNPF
PGD
ATG101
ACVR1
TMEM65
PGLS
TKFC
DDB1
DNAH7
MDM2
TRDMT1
RIMBP3
POU2F1
ELOVL6
GARS1
ZNF395
GFUS
RAN
LCOR
FAF1
CNPY3
SGK1
BOD1L1
SUPT4H1
RCOR3
SMIM20
DNAJB2
TMEM199
POLDIP2
FKBP5
CSNK1A1
GALE
DYNC2H1
CDC42
POLD2
PPIL4
SPRY2
DENND4B
SMG6
GPCPD1
EHD1
DHRS4L2
NCKAP5L
MRPL20
CXXC4
RERE
C6orf89
SNAPC5
PPP4R3B
B3GALNT2
CASTOR2
RCC2
POLG
ABHD12
CIAO2A
TBL3
PRKAB1
IPP
RAC2
ZBTB45
NUS1
TPP2
RBSN
CCDC43
TAF12
PEX2
ZNF593
UBE2K
C1orf232
ZC3H6
FDX1
MACROH2A1
PTP4A2
RNF216
NCBP3
PLEKHM1
CLCN3
FOS
INTS5
THYN1
ACAD8
TMEM41A
RAB11FIP1
DCP1A
SLC35A1
LRRC59
CD93
SPTBN5
CLN5
RGS14
PSTPIP1
NDUFV1
ETFA
MYADM
PPP1R8
ZBTB12
STARD3
HIBADH
DRAP1
C11orf68
ZNF774
PRR19
PAFAH1B3
ATXN2
SPPL2A
FADS2
FADS1
RBM15B
PRKAG1
ZNF397
SECISBP2L
WDR53
FBXO45
CAP1
MIDEAS
CNR1
ABCF1
IQSEC1
DTX2
CYP2W1
LGALS1
IDS
RCN2
SCAMP4
ADAT3
SEC13
NOL4L
RAB3D
ARID1A
PURB
FAM3C
MT1G
FOXN2
BIRC2
DHDDS
ADPGK
SPATC1
MVK
NIBAN1
EXD1
CHP1
OSBPL3
DBI
C2orf76
UHRF2
SEPTIN2
RNF168
HDLBP
LST1
SLC43A3
GFRA1
TRNAU1AP
TESMIN
SIPA1
RFC2
SLC39A7
RXRB
MRPS28
CLK1
MAP2K3
RNF19A
PDZRN3
PLAGL1
ZFAND3
URGCP
PSMD9
HPD
SNX15
RUNX3
NSUN6
ARL5B
GNA13
TMEM123
ZZZ3
ANKRD36C
PHF13
YARS1
S100PBP
CPQ
ZNF212
RNF34
HBS1L
CELF4
FBXL18
EIF3B
DLST
ZFPL1
PKNOX1
CDCA5
ABHD2
TMEM230
MGST1
CCNL2
TAF15
ICE2
SNAP29
PI4KA
MYL12B
UBE2V2
TRIAP1
KATNA1
FES
CSRNP2
MESD
RANBP3
GTF2H2C
GTF2H2C_2
ZCCHC4
POLDIP3
ERMARD
C15orf40
VPS36
NEURL2
CTSA
TUBGCP3
GZF1
MRPS15
IGFBP6
HTRA2
TNPO1
C15orf39
FANCE
POLR2J
CDK11B
CDK11A
TPO
IGF2BP3
REL
CLYBL
RAB37
ZNF202
DDX46
SRSF2
MFSD11
METTL23
JMJD6
HSPE1-MOB4
HSPE1
HSPD1
WDR18
STAT1
SLC25A19
MTHFR
LRRC37A3
CLCN6
STAU2
FAM76B
CEP57
MTHFD1L
CRLS1
VPS37A
MALT1
F2RL3
CNOT7