ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039041 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◣ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
PSMD1
RABL2A
SUDS3
POLR3F
DZANK1
DYNC1LI2
PSMG2
CEP76
MAPKAPK5
NME6
CACTIN
IPO13
NVL
TBCK
AIMP1
RWDD1
HADHB
HADHA
RPL21
NCLN
VTI1B
EFTUD2
CCDC103
NUP85
SRD5A1
NSUN2
ID2
SLC35B1
NUP205
POLR2E
STAM
HSPA9
EXOSC5
BCKDHA
TSNAX
MRPS7
GGA3
HOXA2
REXO1
STAM2
DCTN1
VDAC2
UPF2
SKP1
LYRM4
FARS2
ATP5MG
GOLGA5
SMC2
BBS9
COMMD1
CCT4
FARSB
C19orf48
SUPV3L1
PAK1IP1
C6orf52
GOSR2
PSMD12
BLCAP
RPS23
ATP6AP1L
DPH6
VARS1
PES1
NDUFA4
SEC61B
IRGQ
ZNF576
TTC8
ZRANB2
TSN
SELENOF
HS2ST1
TMED1
MRPS5
PNO1
TM9SF1
COX7A2L
RBKS
BABAM2
EIF4ENIF1
ANAPC7
USP1
IQCG
RPL35A
RBBP5
CAPRIN1
PI4KB
ISCU
SART3
ICE1
MRPL11
PDAP1
BUD31
RABGGTB
RPS27A
CLHC1
ADK
AP3M1
FAM104A
C17orf80
PROSER1
NHLRC3
XPNPEP3
ST13
ACTR10
PDE12
RBPJ
CDC42EP3
ZFHX3
OSGEP
APEX1
LTBR
SCNN1A
NEO1
RPS12
BAG6
APOM
UFM1
C12orf29
PTK2B
ZNF608
CLGN
PCBP1
PTGES2
NR2F1
NSUN6
ARL5B
CCDC200
PAF1
MED29
VANGL2
SF3B3
COG4
DIAPH3
RBMS3
GABRB2
LAMA3
EIF2S3
ST18
TLE2
ZGPAT
ARFRP1
HEXIM2
MRTO4
EMC1
HBB
GADD45GIP1
PIN4
MBD2
DDX39B
SUCLG1
GATA4
SLC30A4
NDUFA10
MSX2
TTI2
MYRIP
CXXC4
CABIN1
ARHGAP11A-SCG5
ARHGAP11A
SEMA3E
TMEM106B
RSRC1
HEY2
CNR1
KAT6B
TBX2
MET
BNIP3
RARA
ARHGEF10L
RPS29
LRR1
CDS1
OAZ3
HES1
MKRN2
PRUNE2
PDHX
APIP
CACYBP
STK36
RNF25
SMAGP
ZNF746
SEC11C
SPAG17
ZFHX4
KDM3A
ST7
RPN1
RPL7
RDH10
FOXP1
EIF3D
LIN28A
CDC73
HOXA4
TBC1D9
CNPY2
PKDCC
METTL25
CCDC59
GFRA1
ZNF383
TXNRD1
TMEM70
TAF9
RAD17
AK6
NDUFS7
CBWD5
CBWD3
CBWD6
CCDC174
FMN1
POLR3A
ACOT2
OSGIN2
TNK2
GPR108
SLC25A53
FREM2
SPIN1
PCBD2
REC8
GTF3C4
DDX31
NDUFB3
FAM126B
TCF7
HOXA1
FRRS1
RABGAP1L
RPS10-NUDT3
RPS10
PCDH15
EPM2A
IL20
GORAB
GTDC1
TBX3
CFAP69
WDR74
TCF4
MGP
SKIL
OTUD7B
ESRRG
TNFRSF19
METRN
ITGAV
MYZAP
GCOM1
RUNX1T1
ALKBH5
MGST1
SLITRK6
ATOH1
FGD3
ZNF507
RGS8
STX19
EMX2
CS
RARG
ZNF395
GEMIN2
EOMES
PBX2
TMPRSS11F
ATXN2
TMEM9
YTHDF2
SYNJ2BP-COX16
SYNJ2BP
CSNK1A1
IPMK
CISD1
CLCN3
POU2F1
SPCS1
GLT8D1
SERTAD2
ACKR3
USP34
NLGN1
ARAP2
MRPL34
ID1
ABHD8
PDCL3
SNX16
NXPH4
C16orf91
CIAO2A
CYP26A1
PRR13
VPS33B
ERP27
UBE2I
USP17L15
NEFH
INKA2
PRKD1
CEP70
LIX1
ELOVL6
RASSF6
HUS1
PEX14
IMMP1L
ELP4
ADM
KAT6A
TMSB4Y
DUSP9
ATXN1L
DENR
SLC25A6
SLC35F2
DONSON
SRSF11
LRRC40
DHRS3
PDE4D
PXYLP1
TIGD1
EIF4E2
SEMA6D
CBX3
HNRNPA2B1
NCBP3
SEPTIN2
HDLBP
B3GNT5
JAKMIP1
MYLK3
PDHB
MEIS2
SLC35E3
ID3
C2CD5
TRIP4
CRABP2
TLE4
HSPA4L
H2BC5
MCU
HSPA1B
RAI14
RARB
RCOR3
SPATC1L
NEUROG1
LMO1
RIMS1
SH2B1
SEH1L
CTF1
RNF207
MGST2
DLAT
KANK1
TMPPE
GLB1
EBAG9
ACOT1
PKN2
HNRNPD
NR2C1
CALM2
SORBS2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SHB
ZBED9
USP17L22
USP17L20
POGLUT3
COLEC12
MSS51
TPRA1
AKIRIN1
AKAP9
GPRC5A
GOLM2
ADAMTSL4
ANK3
DERA
CLDN6
PRKAG2
MELTF
FOXP2
IFI16
PRTG
GRHL2
PYDC5
APLN
PHIP
KMT2A
STK38
SOX6
YAP1
FAAP24
CEP89
NEURL2
CTSA
OTUD4
BCAP29
SSBP2
ADH1C
TCHP
PCLO
JMJD1C
CALCRL
LPCAT3
TAF1A
HECTD4
SMARCD2
SLC35E2A
UBA3
TMPRSS12
KANSL3
MACROH2A1
POLR2J3
COX5A
CPVL
CHN2
RCOR1
PANK2
PRIM1
ZSCAN30
GPR37
CMTR1
HOXB13
NR2C2
RNF111
ETV1
REL
EID2
DYNLT1
DLG2
ACYP1
ZC2HC1C
ZKSCAN2
URGCP
CCDC102A
URGCP-MRPS24
MINDY2
SECISBP2L
RILPL1
EML5
AP1B1
ARSB
PEX2
TRIM24
EIF4H
QPRT
FNDC5
IQSEC2
ZDHHC17
BRWD1
MYADM
POFUT2
GIGYF1
KCNS3
ZBTB17
UFSP1
PARP9
DTX3L
NEUROG2
UBE2V2
SALL4
BNIP2
CLK1
IQCB1
EAF2
ING1
NCOA7
SKAP2
MDC1
MYO6
GBP1
PALLD
ZNF385B
MTF2
GTF2H5
DNAJA2
CDK6
PRKRA
PJVK
PNN
DZIP3
CIP2A
ACBD6
PLIN2
RGS2
ZNF341
MIGA1
CD55
NNMT
CTNNA1
VEPH1
PCTP
MRPS28
CMTR2
HINT2
EYA1
CMSS1
FILIP1L
SDR39U1
PLEKHD1
SLC7A2
RBM7
C11orf71
CEP295
TBC1D32
ADAMTS3
IDH1
CNOT10
SCOC
UBB
NUP93
NOX3
MRPS31
DNMBP
ZNF629
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SOD2
WTAP
PCNX4
REV1
TK2
DNAJB5
SKIV2L
NELFE
CLTC
NANP
CENPS-CORT
CENPS
RPL5
DNAH12
BTG1
FLVCR1
TMEM205
CCDC159
CENPBD1
IFT22
TANC2
NDNF
PTGES3
ZNF3
BAG3
PHACTR2
ACP4
GRAMD2B
NELFA
BAG2
ARL14EP
NIPSNAP2
TLX3
THUMPD3
NAA40
SEMA4B
PPP1R3D
FAM217B
RHOBTB1
MCF2
LSMEM1
FAM110A
TNPO3
ELOA
H3-3A
NRDE2
JAK1
MPPED2
CTH
CFAP20
CRADD
HEBP2
FABP5
IGF2BP3
ROBO3
TBC1D8B
CDKL2
LOC100287896
LIPT2
WDR81
BATF2
TRIP12
FBXO36
ASAH1
ZFAT
TRPM7
B4GALT3
LRP6
MDM2
PXMP2
POLE
ZSCAN25
SASH1
HOXA3
RPS3A
SLC30A9
TAS2R7
DHCR7
TRAP1
IRS2
TM9SF3
EDNRB
PHETA2
TSPAN4
POLR2L
RAN
MTCH2
CDKN2AIP
CYP51A1
MANEA
SLX1B
SLX1A
BOLA2B
BOLA2
SERPINB6
NPNT
FSTL5
GTF2IRD2
GTF2IRD2B
MICU2
GRWD1
P2RX4
ARHGEF12
BCAT1
MARK1
SMIM20
SPPL2A
CHD8
INTS10
NEK2
MMAA
CCN2
PSMA7
USP12
EEF1E1
ATP9A
CEP41
CCDC169-SOHLH2
CCDC169
SUPT3H
ZNF391
RTRAF
COA1
CFAP46
SLC9A1
CAMLG
RTL10
GNB1L
ZFAND6
APPL2
ANAPC15
STON2
PRSS22
SPDYE14
SPDYE10P
CASTOR2
C15orf61
KIF5B
TBC1D1
ATF6
CNOT2
TTK
LSM8
OPA1
BAMBI
KRTAP3-1
MED27
ELMOD1
LNPEP
TBC1D5
SHOC2
BBIP1
DCLK1
CTXN2
IGFBP2
CRPPA
ZSWIM7
TTC19
ETAA1
TMEM144
SLC7A11
DTNB
HSPE1-MOB4
HSPE1
HSPD1
SIK3
ADIPOR2
AGPAT5
LIMA1
ZFP64
VPS13B
TYW1B
EIF5
ACVR1
FAM162A
CCDC58
TXNDC11
CCNG2
CREB5
STX18
DAZAP1
RAB11FIP2
C16orf95
FAM168B
UQCRC2
SLC44A2
NAT10
ZDHHC6
VTI1A
TRPC1
MEMO1
SYDE2
PNPT1
MTIF2
SLC40A1
HIC2
BCO2
DMBT1
SPECC1
MTRF1L
POLD2
SCAP
AMZ2
CFL2
NFIB
FER
DYNLRB1
GUF1
TFAP4
GGH
SPATA9
RHOBTB3
CELA1
NMD3
MECOM
ST8SIA6
BEND4
FSTL3
ANKRD18A
ATF2
WDR75
PTH2R
TJP2
ROCK2
NUP42
NUTM2E
RAPGEF2
SETD9
SPTSSB
CASC3
IMPA1
ATG101
MRPL39
TFEC
AXDND1
ZNF292
PARL
UROS
BCCIP
CCNC
CAPS2
TCTEX1D1
PRKACB
NPFFR2
TFAM
PRSS47
VWA8
ZNF331
NUDT15
ANKRD36C
TDRD3
RIOK3
TEFM
RPRM
GUCY1A2
GTPBP8
STAT2
ELMOD2
AKT3
KMT5A
MAP3K2
AS3MT
DPY19L4
BIRC6
PDE7A
PDE4DIP
ATXN2L
LINC02210-CRHR1
DSN1
TYW3
CRYZ
ACP3
STRADA
ZBTB45
CGGBP1
WDHD1
SOCS4
C3orf38
XPA
CSTF2T
COQ10B
B9D1
LEO1
CTNNB1
PIP4K2B
CDK8
N4BP2
ZNF148
PLS1
SMARCAD1
MRE11
ANKRD49
HNRNPA1L2
KCNH1
MTBP
MRPL13
MRPL38
SGK3
ATXN7L2
PPP1R13B
MRPS36
ATP5F1E
IFT88
SKIDA1
DDX59
AGPS
ZNF675
CIPC
EFCAB2
RNF220
SLC25A46
SND1
USP30
PHF8
PKIA
ANKRD20A1
LUZP2
SULT1A1
CDH12
C4orf36
BAZ1B
PIKFYVE
ZC3H6
LRRC37A3
SPSB2
ETNK1
SLC39A10
SEC24B
ARHGEF5
REV3L
MACROD1
SECISBP2
KMT2D
ZMYM4
TATDN3
NSL1
SIRT2
NFKBIB
PATL1
AVEN
NREP
MED23
RSPH3
C6orf136
PLEKHA6
OLA1
CCNG1
ZSCAN31
MYEF2
CPLANE1
SLC35A1
TRIM37
GPR137
BAD
INPP5A
TMEM132A
VPS13C
C12orf73
UIMC1
RBM43
RYBP
HIBADH
ZFP62
PTPN4
KLHL9
GCA
IFIH1
DCP1A
PIGU
PFKM
USP49
DNAJA1
APTX
ZC3H15
RDX
ZGRF1
PLK2
LARP7
MBIP
MAST2
SMN2
SMN1
SESN1
EIF1
KMT5C
AP3S1
CREBL2
SLC27A6
NIBAN1
UBE2D4
ZNF18
GBE1
MFSD8
ABHD18
PDXDC1
NEDD1
PRKAB2
CHD1L
KIAA1109
HIF1A
FTCDNL1
PLBD1
GPD2
CKMT1B
CEP135
GCFC2
YPEL1
PPP4R3A
RPL6
PTPN11
ZNF891
ZNF10
PDSS1
L3HYPDH
JKAMP
TMEM63B
MRPL14
ATP6V0E2
PAN2
DRAP1
C11orf68
JRKL
CCDC82
WDR48
SCN11A
UBA6
TENT2
KCNT2
EGF
RNF138
ASXL2
DIPK1A
SOX5
RUSC2
HNRNPLL
DNAAF2
MTMR10
CC2D2B
SUPT7L
SLC4A1AP
ZSCAN12
USPL1
HMGB1
SENP1
MTMR2
HEMK1
AFF1
RPAP2
GLMN
FBXL12
SBNO2
CSRNP2
UBE2J1
SLC7A6OS
PRMT7
RNF146
MPP5
USP45