ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◣ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
IPO13
POLR3F
DZANK1
DYNC1LI2
CACTIN
NME6
NUP205
EFTUD2
CCDC103
MAPKAPK5
NEUROG3
PSMG2
CEP76
SUDS3
RPL21
NUP85
MRPS7
GGA3
VDAC2
NVL
DCTN1
HSPA9
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
POLR2E
C19orf48
RBKS
BABAM2
ATP5MG
SEC61B
PAK1IP1
C6orf52
SRD5A1
NSUN2
SMC2
EXOSC5
BCKDHA
IRGQ
ZNF576
ACTR10
MRPS5
NCLN
COX7A2L
TMED1
SLC35B1
TTC8
PI4KB
TSN
PNO1
NEUROG1
LYRM4
FARS2
PDAP1
BUD31
GOLGA5
FARSB
ADK
AP3M1
BLCAP
PES1
SUPV3L1
VARS1
FAM104A
C17orf80
REXO1
RPS23
ATP6AP1L
IQCG
RPL35A
EIF4ENIF1
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
SELENOF
HS2ST1
RBBP5
ISCU
SART3
NDUFA4
USP1
PSMD12
ANAPC7
ICE1
PCBP1
UFM1
TMEM70
BAG6
APOM
PROSER1
NHLRC3
OSGEP
APEX1
PAF1
MED29
MYRIP
SF3B3
COG4
ATOH1
MRPL11
RABGGTB
XPNPEP3
ST13
ST18
CABIN1
RPS12
PTGES2
PIN4
VEZT
FGD6
ZGPAT
ARFRP1
RPS29
LRR1
NDUFA10
RPS27A
CLHC1
EIF2S3
RBPJ
DDX39B
GADD45GIP1
RBL2
BNIP3
RPL7
RDH10
MBD2
HES1
TAF9
RAD17
AK6
DENND1A
GORAB
PCBD2
GPR108
DTNB
LPIN1
ZNF746
ANKLE2
NEUROG2
HSPA1B
SHB
GADD45G
MRTO4
EMC1
ACOT2
PDE12
SEC11C
STK36
RNF25
PRUNE2
FGFRL1
CCDC92
PMAIP1
PDHX
APIP
HESX1
TLE2
SKIL
GTF3C4
DDX31
AXDND1
RYBP
NKIRAS1
NR1D2
ARHGAP11A-SCG5
ARHGAP11A
ZNF704
APLN
ALKBH5
TPRA1
ZNF383
SUCLG1
PLA1A
RPN1
SPIN1
TIGD1
EIF4E2
CDC73
MAST2
ACOT1
ID2
RARA
GABRB2
TLE3
UBE2I
SPCS1
GLT8D1
DLX4
OAZ3
SRSF11
LRRC40
UPF3A
S100A10
GSR
CCDC200
RTL10
GNB1L
FOXP1
LIN28A
CNPY2
RAN
CERKL
MELTF
HOXB9
RIMS1
RUNX1T1
BFSP1
RSPO4
RBBP7
OTX2
NEFH
METRN
B3GNT4
CALM2
CDX1
PRSS47
GSX1
AP1B1
GC
TBC1D8
PDHB
TMPPE
GLB1
DUSP4
GATA4
LCOR
PKDCC
MKRN2
RPS10-NUDT3
RPS10
KAT6B
UBXN11
CD52
KIF21B
MTCH2
ADM
APBB1IP
DUSP14
C15orf61
CCDC174
WDR74
DDX3X
TNFRSF19
PCLO
OTP
SERTAD2
MRPL38
SMARCA4
KMT5A
CIAO2A
BICRA
GTF3A
RNF207
CPVL
CHN2
STRADA
KAZALD1
FOXP2
KLF17
SNRPA
C19orf54
LPCAT3
EIF4H
IRX4
C16orf91
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
GRHL2
HNRNPD
ZNF891
ZNF10
MEF2B
SMAGP
NRDE2
PAH
ASCL1
SEPTIN2
HDLBP
HECTD3
REC8
OTUD7B
NCOA2
H3-3A
KMT5C
RNF32
CNR1
PLEKHA6
TCHP
SLC30A4
TCF7
SCAMP4
ADAT3
CLDN15
KCNJ4
JAKMIP1
WNT3
DYNLT1
ATP6V0A4
MACROH2A1
RARB
JAK1
TAS2R7
ZNF397
VENTX
METTL11B
BRWD1
JUP
ZNF395
NEURL2
CTSA
FAM53B
CEMP1
NR2C1
STX18
USP17L15
MARVELD3
KMT2A
NRG1
SH2B1
PCTP
CDS1
SEMA6D
PEX14
MEPCE
ZCWPW1
RPS24
MECOM
ESRRG
EOMES
BEND4
MAPRE1
SERTAD3
FBXL4
MAPK12
ANXA9
CYP26A1
RUSC2
SH3YL1
ACP1
KCNS3
HINT1
MDM2
AKAP10
PRELID3B
BAMBI
COX5A
ADAM17
ERI1
SOD2
ACAT2
TARBP2
PRKD1
SLC35E3
ACYP1
ZC2HC1C
ZBTB25
ZBTB1
ROGDI
PKIB
EVC2
NELFA
PRDM10
NANP
TRAP1
ZNF248
PLXNB1
CS
CNOT2
UFSP2
KDM3A
CENPBD1
CTF1
DNAJB5
RBBP8NL
BTBD3
PFN2
MRPL34
LIX1
ABHD8
YTHDF2
CDC42EP3
SLC40A1
METTL27
CLGN
CDC42SE2
ZSCAN30
KDM4C
BBS9
KCNQ4
MINDY2
ING1
PSMA7
KDM7A
SGK1
PIGU
PTPRG
CLK1
RBMS3
FAM162A
CCDC58
CTSZ
IKZF2
SLC25A6
CPLX1
RPS3A
DHRS3
METTL25
CCDC59
ZDHHC17
INSM1
KAT6A
CTBP2
ACTB
TMEM211
MUC20
GATD3B
GATD3A
GLI1
RGPD8
RGPD5
EIF5
BCO2
KLHL4
DONSON
PEX2
PDE4D
ZNF485
ZNF341
MDK
SNX3
ABCC6
ZBTB17
NOL4
ZBTB20
RAPH1
HIC2
HSPA4L
LAD1
PPP1R13B
CMTR1
RPS8
SYDE2
EPS8
TRIP12
FBXO36
RILPL1
SLC11A2
ZFAND6
CLCN3
OTX1
NAA40
NPNT
GOLM2
IGFBP2
RHOBTB1
HOXA4
HOXA2
NBAS
TLE4
SP5
ANK2
MALRD1
GRSF1
ARSG
NR2F1
PRDM12
ZFHX4
RASSF2
FLOT1
NDUFS7
HOXB4
INAFM2
DUSP6
SPATC1L
RNF149
SH3BP2
HOXA3
RGS12
ZNF608
CBX3
HUS1
ARID5A
NEO1
HEXIM2
ZFHX3
PARK7
DSCAML1
MTRNR2L2
CCPG1
C15orf65
RPS6KA1
SEC14L1
C11orf24
KCNAB2
ARHGAP24
RAI14
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
GRHL3
HOXC5
SLCO4C1
CCDC88A
ID1
SPECC1
ARHGEF10L
NADK
FGR
STK38
NBEAL2
NKD1
VOPP1
SKIV2L
NELFE
BIN2
MTMR4
CDCA7L
DIAPH1
ZNF76
NBPF1
USP15
CAMTA1
WNT10B
POR
MEF2C
MTRNR2L8
LNPEP
CPSF4L
DENND2D
RSRC1
DIAPH3
IQCH
AAGAB
NFKBIA
HEBP2
ZCCHC3
CD38
VAV1
TRAF4
ATP23
PNKD
PCNA
POLR2J3
RASSF5
SPACA1
HES3
CLDN2
EXOSC4
IQGAP2
PPIB
SLC9A1
PDPN
PKN2
PLCB2
H6PD
SMARCD2
IFRD2
FAM110A
NDFIP2
PRDM1
CFD
TLE6
SLC35E2B
PLEKHO2
TBRG4
CCDC114
JAK3
CYCS
RNF139
SH3TC1
DYNLL1
SP7
POLR3A
ZDHHC4
CEP41
HMGCS1
ARIH2
CBWD5
CBWD3
LTBR
DPP9
PIK3AP1
CLIC4
BNIP2
ZNF740
CSAD
KCTD6
ADCY7
HNRNPA2B1
PRSS56
AKIRIN1
KIF26A
DGKZ
SLC35E2A
KANSL3
CBFA2T3
HOXB3
TXNRD1
PTGES3
TMEM222
NOTCH2
FAF2
PKM
C12orf29
SRPRA
HES5
FCHSD2
SSX2IP
CTTN
PXYLP1
USP3
ATXN1L
SNAPC3
CD164
TBX2
TRMT6
MCM8
SLC39A13
CSRNP1
BAZ1B
MRPS24
TRERF1
ANKRD13D
RMND5A
RARG
ARHGAP4
UNC13D
TTI2
PIP4P2
LAPTM5
MAP2K1
CENPH
CLTC
RFESD
ZNF25
VANGL2
USP42
MTCH1
MAD1L1
KCNH2
SLC10A2
IL21R
PPCDC
DGAT2
THRAP3
RNF125
RASGRP2
ARHGEF1
PEAK3
MRPS31
ZNF503
GFRA3
ATG16L2
RAD50
EPM2A
ZSWIM6
LRIG3
PSMD3
PIKFYVE
ARL4A
SBNO2
SDE2
FBXO41
RWDD2A
PGM3
MAPRE2
SMPD1
KEAP1
MAPKBP1
RXRA
WTAP
ZNF414
CBWD6
MTF2
ERLIN2
CASC3
ASNS
MAGEF1
ZNF318
RCOR1
PEX3
ADAT2
PRKDC
MTRF1L
MCM4
NIBAN3
USPL1
HMGB1
MC1R
FXYD2
PANK2
UBL7
C1orf159
ATAD3B
HOXD3
FAM120B
OR2L13
NGRN
TCF4
PHF19
MCU
BUD13
TIGD5
EEF1D
VPS37C
RER1
MORN1
TUBB
RNF103-CHMP3
MAPKAPK3
CISH
NIBAN2
IFNGR1
ARF3
GPATCH8
C18orf32
NCBP2AS2
NCBP2
UPP1
HOXC6
USP21
CYB5R4
ATAD3A
CNOT6
KIF1C
INCA1
FAM227B
DTWD1
DDX23
TDP2
BHLHE40
ACOT13
RAP1GAP2
FABP5
YY1AP1
DAP3
C12orf65
HPF1
NINJ2
PCMT1
SPDYE14
SPDYE10P
NMNAT1
LZIC
SYPL1
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
ARHGAP45
TSPAN4
POLR2L
SEH1L
NUDT15
CEP135
CCNL1
ASB1
MYCBP2
CACYBP
GSPT1
PTDSS1
MTERF3
SLC7A5
MT2A
LSM5
AVL9
UNK
EIF3D
MTMR1
CDS2
MFN2
ATG5
HYLS1
LTB4R
C21orf91
ZNF219
LANCL2
RPLP1
RITA1
DDX54
TBX3
CTSC
HOXC4
ADORA2A
KRI1
ITPRIP
DISP3
ASH1L
ZCCHC24
SNUPN
PSMF1
HMGCL
GFER
GTF2H3
EIF2B1
QPRT
DLX2
KDM1A
USP34
TRAM1
UBIAD1
SP2
SLC16A6
THUMPD3
MAPK6
IMPA1
CD63
FNTA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PDZD2
MBD6
ARF4
ZFAND2A
LAMP1
CARMIL1
NOC4L
DDX51
IL6R
TAS1R1
NOL9
PTK2B
NREP
ATOH8
ARHGAP27
BRAP
ACAD10
RPS3
EIF1B
FKBP1A
RPL8
CHST11
LONRF3
HNRNPF
PGD
ATG101
ACVR1
TMEM65
PGLS
TKFC
DDB1
DNAH7
TRDMT1
RIMBP3
POU2F1
ELOVL6
GARS1
GFUS
FAF1
CNPY3
BOD1L1
SUPT4H1
RCOR3
SMIM20
DNAJB2
TMEM199
POLDIP2
FKBP5
CSNK1A1
GALE
DYNC2H1
CDC42
POLD2
PPIL4
SPRY2
DENND4B
SMG6
GPCPD1
EHD1
DHRS4L2
NCKAP5L
MRPL20
CXXC4
RERE
C6orf89
SNAPC5
PPP4R3B
B3GALNT2
CASTOR2
RCC2
POLG
ABHD12
TBL3
PRKAB1
IPP
RAC2
ZBTB45
NUS1
WBP1L
TPP2
RBSN
CCDC43
TAF12
ZNF593
UBE2K
C1orf232
ZC3H6
FDX1
PTP4A2
RNF216
NCBP3
PLEKHM1
FOS
INTS5
THYN1
ACAD8
TMEM41A
RAB11FIP1
DCP1A
SLC35A1
LRRC59
CD93
SPTBN5
CLN5
RGS14
PSTPIP1
NDUFV1
ETFA
MYADM
PPP1R8
ZBTB12
STARD3
HIBADH
DRAP1
C11orf68
MEIS3
ZNF774
MARCHF7
PRR19
PAFAH1B3
ATXN2
SPPL2A
FADS2
FADS1
RBM15B
PRKAG1
SECISBP2L
WDR53
FBXO45
CAP1
MIDEAS
ABCF1
IQSEC1
DTX2
CYP2W1
LGALS1
IDS
RCN2
SEC13
NOL4L
RAB3D
ARID1A
PURB
FAM3C
MT1G
FOXN2
BIRC2
DHDDS
ADPGK
SPATC1
MVK
NIBAN1
EXD1
CHP1
OSBPL3
DBI
C2orf76
UHRF2
RNF168
LST1
SLC43A3
GFRA1
TRNAU1AP
TESMIN
SIPA1
RFC2
SLC39A7