ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039038 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◣ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
MAPKAPK5
CACTIN
POLR3F
DZANK1
NME6
NVL
PSMG2
CEP76
SUDS3
DYNC1LI2
VTI1B
IPO13
NCLN
VDAC2
HSPA9
RWDD1
EFTUD2
CCDC103
NUP85
EXOSC5
BCKDHA
GATA4
RPL21
REXO1
DCTN1
HOXA2
SLC35B1
TBCK
AIMP1
NUP205
POLR2E
SRD5A1
NSUN2
BBS9
SEC61B
STAM2
MRPS7
GGA3
STAM
ARHGEF10L
C19orf48
TSN
ATP5MG
BLCAP
GOSR2
UPF2
PES1
ACTR10
IRGQ
ZNF576
HADHB
HADHA
HOXB3
VARS1
SUPV3L1
PSMD12
MRPS5
SKP1
TSNAX
RBBP5
GOLGA5
PAK1IP1
C6orf52
LYRM4
FARS2
PNO1
FARSB
PCBP1
TTC8
FAM104A
C17orf80
RPS23
ATP6AP1L
NDUFA4
ISCU
SART3
PI4KB
SMC2
RUNX1T1
TMED1
RABGGTB
MRPL11
USP1
ZRANB2
PROSER1
NHLRC3
COX7A2L
SF3B3
COG4
CELF4
ADK
AP3M1
TBX2
RBKS
BABAM2
ANAPC7
ICE1
TBX3
EIF4ENIF1
RPS12
UFM1
SELENOF
HS2ST1
TM9SF1
CAPRIN1
NR2F1
XPNPEP3
ST13
RPS27A
CLHC1
DMD
DPH6
PAF1
MED29
PDAP1
BUD31
IQCG
RPL35A
LIN28A
OSGEP
APEX1
ELOVL6
CLGN
BAG6
APOM
DDX39B
VPS13A
CXXC4
NDUFA10
COMMD1
CCT4
HEXIM2
NEO1
OAZ3
DIAPH3
STK36
RNF25
PDE12
PIN4
MGST1
ZFHX4
SUCLG1
MRTFB
PRUNE2
ZNF503
ZNF608
ASPG
POU2F1
ACKR3
NIBAN1
KIAA1217
FLVCR1
PKDCC
CCDC183
CNPY2
PTGES2
ACVR1
MRTO4
EMC1
PLAGL1
ARHGAP11A-SCG5
ARHGAP11A
P2RX6
C9orf153
HOXA4
SEH1L
ZFHX3
CCDC200
HOXB9
ZNF587B
FGF7
PPFIA2
TLE4
SEC11C
EIF3D
RSRC1
CNR1
TAF9
RAD17
AK6
EYA1
PRR13
RPS29
LRR1
HES1
TNP1
RPL7
RDH10
ZGPAT
ARFRP1
CDC42EP3
ZBTB18
GTF3C4
DDX31
NT5C3A
SCHIP1
POLDIP3
TMEM9
POLR3A
DSCAML1
ZP3
RARA
SORBS2
CPA1
LIX1
HOXC5
CYP26A1
ABCC9
COLEC12
SKIL
PPP1R3D
FAM217B
ZNF383
RAB30
HOXA3
ATP1A1
MYLK3
CDC73
ID2
CACYBP
TMSB4Y
KDM3A
RPN1
SALL4
CDH3
GABRB2
MEIS2
PEDS1-UBE2V1
PEDS1
TTI2
GFRA3
CS
NNMT
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HOXA5
TXNRD1
VTN
GORAB
USP34
PDGFRA
REC8
MGST2
IRS2
TLE2
METTL25
CCDC59
STRA6
EIF2S3
HNRNPD
HOXB8
COL5A2
PDHX
APIP
VANGL2
MDC1
NBAS
SLITRK6
FGF8
ZNF746
CAPN7
TBX18
CEP70
EDNRB
ALKBH5
IGF2BP3
UNKL
GADD45GIP1
CALM2
PDE7A
ALG10B
CCN2
IL1RAPL1
NDUFB3
FAM126B
HSPA1B
C12orf29
WDR74
ID3
HEY2
DUSP9
DNAJB4
CREB5
HAND2
ST7
OTUD4
FOXP1
MRPL39
MRPL38
SEMA3E
BRD3
NEURL2
CTSA
ECHDC1
SPRR2F
ESRRG
TNRC18
KANK1
NELL2
SMAD7
MCF2
TCF4
ZNF644
DZIP3
CIP2A
MPPED2
AHNAK
SH3BP4
PCDH15
GTF2H5
PKIA
IKZF4
ETV1
NR2F2
FHL1
PLEK2
DCN
RCOR1
PCBD2
TNFRSF19
RARB
UBE2I
DUSP6
RPS10-NUDT3
RPS10
GRWD1
SH2B1
CSNK1A1
TRIM24
GDE1
GFRA1
IL19
IGFL2
RAPGEF4
CSDC2
ATG2A
CFAP69
CDH18
SIRT4
STARD13
BNIP2
ZYX
H2BC5
MAML3
RAP2C
ANK3
USP17L15
SRRM3
CDA
CLCN3
DLAT
RBM25
KMT2A
PDCL3
PCDH18
VIM
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CRY1
SLC30A4
TBC1D5
DNAH12
UGT2B11
DLG2
MID1
YTHDF2
MSX2
ZNF341
RARG
SYNJ2BP-COX16
SYNJ2BP
CBFA2T2
HOXB5
OTUD7B
GOLM2
SASH1
HOXB13
SPIN1
TBC1D9
ELF1
RAPGEF2
ANKS1B
WBP4
NSD2
TAS2R9
TFAP4
PCNX4
TMED7-TICAM2
TMED7
ANXA11
ARAP2
H3C12
VPS33B
IFI16
PYDC5
NDUFS7
ITGAV
SVEP1
KAT6B
SERTAD2
XPR1
SLC18A1
SPCS1
GLT8D1
ALG5
SLC25A6
TTLL6
PAM
EIF4A2
NEK7
PAQR8
EIF3A
FGD3
TCHP
HIBADH
DRAP1
C11orf68
MEF2C
SMIM20
AXDND1
RNF207
GAS1
RGS5
CLDN2
XPO1
CPN2
ST3GAL6
SEMA3A
CCDC174
LIN28B
UBA3
JMJD1C
UTRN
ATP5MC1
EVA1B
CLASP2
AJUBA
SKIV2L
NELFE
RCOR3
SKAP2
PDCD4
PRSS47
AKIRIN1
ACYP1
ZC2HC1C
PNN
CMTR1
SRCAP
LOC730183
CTF1
ACBD6
ARID5B
RNF125
SGK3
RASSF4
YAP1
ADAMTSL4
CBX3
ADM
HNRNPA2B1
CHD8
ATF6
MYADM
MAD2L2
DRAXIN
ZNF391
CEP85L
E2F6
KAT6A
ABHD12
TRIM41
HOXB2
AMOTL2
MEIS3
ZBTB20
ALPK2
SLC28A3
THUMPD3
MRTFA
GLRX2
IFT74
BCL9
HUS1
NCBP3
REL
ISG15
COX7A2
NELFA
LDB1
MFAP4
ACTB
MAP4
TNNT2
COL23A1
QPRT
ZSCAN30
MYO16
DUSP4
RERE
KLHDC9
POLR2J3
KANSL3
HINT2
PHACTR2
SULF1
MTRF1L
SYNJ2
ARHGEF1
PPIP5K2
ALX1
ECSIT
CNOT2
NCOA7
ITGBL1
BAG2
TBPL1
KIAA2026
SLC26A8
NBN
ATAD2
SEC14L5
MARCKS
SHB
KCNT2
TRIP12
FBXO36
CPVL
CHN2
EPHA3
JAK1
ARHGDIB
SLC18B1
BEND4
ZNRF1
FABP5
ELAPOR2
CEP41
SH3BGR
LCA5L
DEDD
MDK
NEUROG2
NEUROG3
VEZT
FGD6
PMAIP1
ATOH1
NEUROG1
BNIP3
BICRA
IGFBP2
ANKLE2
C16orf91
ST18
TPRA1
SP5
RBPJ
ANK2
PDHB
INSM1
TMEM70
MALRD1
MYRIP
RBBP7
GADD45G
GPR108
GRSF1
ARSG
KAZALD1
PRDM12
RASSF2
MRPL34
FLOT1
HOXB4
INAFM2
BFSP1
TMPPE
GLB1
SPATC1L
RNF149
SH3BP2
UPF3A
MBD2
METTL11B
RGS12
LPIN1
ARID5A
PARK7
MTRNR2L2
TIGD1
EIF4E2
CCPG1
C15orf65
RPS6KA1
SEC14L1
SRSF11
LRRC40
C11orf24
KCNAB2
ARHGAP24
RAI14
GRHL3
SLCO4C1
CCDC88A
ID1
SPECC1
NADK
FGR
BRWD1
STK38
KLF17
FGFRL1
NBEAL2
NKD1
VOPP1
BIN2
NCOA2
MTMR4
CDCA7L
DIAPH1
ZNF76
NBPF1
USP15
CAMTA1
WNT10B
SNX3
POR
CABIN1
LPCAT3
MTRNR2L8
LNPEP
CPSF4L
DDX3X
DENND2D
PRDM10
IQCH
AAGAB
NFKBIA
HEBP2
ZCCHC3
TBC1D8
CD38
VAV1
TRAF4
OTX1
ATP23
PNKD
PCNA
DHRS3
RASSF5
SPACA1
ING1
HES3
EXOSC4
IQGAP2
PPIB
MINDY2
SLC9A1
PDPN
PKN2
PLCB2
RYBP
NKIRAS1
PEX14
H6PD
SMARCD2
IFRD2
FAM110A
PCTP
NDFIP2
PRDM1
HESX1
CFD
TLE6
SLC35E2B
PLEKHO2
TBRG4
NR1D2
CCDC114
JAK3
CYCS
RNF139
SH3TC1
DYNLL1
SP7
ZDHHC4
HMGCS1
ARIH2
GTF3A
CBWD5
CBWD3
LTBR
DPP9
PIK3AP1
CLIC4
ZNF740
CSAD
SOD2
KCTD6
ADCY7
PRSS56
KIF26A
DGKZ
SLC35E2A
CBFA2T3
PDE4D
PTGES3
NR2C1
TMEM222
NOTCH2
FAF2
PKM
SRPRA
HES5
RBL2
FCHSD2
SSX2IP
KIF21B
CTTN
PXYLP1
USP3
ATXN1L
SNAPC3
CD164
TRMT6
MCM8
SLC39A13
CSRNP1
BAZ1B
MRPS24
TRERF1
ANKRD13D
DTNB
RMND5A
ARHGAP4
UNC13D
PIP4P2
LAPTM5
MAP2K1
CENPH
GATD3B
GATD3A
CLTC
RFESD
ZNF25
USP42
MTCH1
MAD1L1
KCNH2
SLC10A2
IL21R
STX18
PPCDC
DGAT2
THRAP3
RASGRP2
PEAK3
MRPS31
ATG16L2
COX5A
RAD50
EPM2A
EIF4H
CDX1
ZSWIM6
LRIG3
ZBTB17
PSMD3
PIKFYVE
HECTD3
ARL4A
SBNO2
SDE2
FBXO41
RWDD2A
PGM3
MAPRE2
SMPD1
KEAP1
MAPKBP1
RXRA
WTAP
ZNF414
STRADA
CBWD6
MTF2
ERLIN2
CASC3
ASNS
MAGEF1
ZNF318
PEX3
ADAT2
PRKDC
MCM4
NIBAN3
USPL1
HMGB1
MC1R
FXYD2
PANK2
UBL7
C1orf159
ATAD3B
MAST2
HOXD3
FAM120B
OR2L13
DYNLT1
NGRN
PHF19
MCU
BUD13
TIGD5
EEF1D
VPS37C
RER1
MORN1
TUBB
RNF103-CHMP3
MAPKAPK3
CISH
NIBAN2
IFNGR1
ARF3
GPATCH8
C18orf32
NCBP2AS2
NCBP2
UPP1
HOXC6
USP21
CYB5R4
DONSON
ATAD3A
CNOT6
JAKMIP1
KIF1C
INCA1
FAM227B
DTWD1
DDX23
TDP2
DENND1A
BHLHE40
ACOT13
RAP1GAP2
YY1AP1
DAP3
C12orf65
HPF1
ADAM17
NINJ2
ACOT2
PCMT1
SLC35E3
KMT5A
SPDYE14
SPDYE10P
NMNAT1
LZIC
SYPL1
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
ARHGAP45
TSPAN4
POLR2L
NUDT15
CEP135
CCNL1
ASB1
NANP
MYCBP2
GSPT1
PTDSS1
MTERF3
SLC7A5
MT2A
LSM5
AVL9
UNK
MTMR1
CDS2
MFN2
ATG5
HYLS1
LTB4R
TRAP1
C21orf91
ZNF219
LANCL2
RPLP1
RITA1
DDX54
APBB1IP
CTSC
HOXC4
ADORA2A
KRI1
ITPRIP
DISP3
MEPCE
ASH1L
ZCCHC24
SNUPN
PSMF1
HMGCL
GFER
EIF5
GTF2H3
EIF2B1
DLX2
TLE3
KDM1A
TRAM1
UBIAD1
SP2
SLC16A6
MAPK6
IMPA1
CD63
FNTA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PDZD2
NAA40
MBD6
ARF4
ZFAND2A
MKRN2
LAMP1
CARMIL1
NOC4L
DDX51
IL6R
TAS1R1
NOL9
PTK2B
NREP
ATOH8
ARHGAP27
BRAP
ACAD10
RPS3
EIF1B
FKBP1A
RPL8
CHST11
LONRF3
HNRNPF
ZCWPW1
PGD
ATG101
TMEM65
PGLS
TKFC
DDB1
DNAH7
MDM2
TRDMT1
RIMBP3
GARS1
ZNF395
GFUS
RAN
LCOR
FAF1
CNPY3
SGK1
BOD1L1
SUPT4H1
DNAJB2
TMEM199
POLDIP2
FKBP5
GALE
DYNC2H1
CDC42
POLD2
PPIL4
SPRY2
DENND4B
SMG6
GPCPD1
EHD1