ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ CDK9: STRING

MAMDC2
FRG2C
PMF1-BGLAP
PMF1
PAXBP1
GOLM2
FRG2
TINAGL1
SLC39A14
COL23A1
UNC45B
KCNIP4
NPNT
ZMYM3
CMSS1
FILIP1L
TTYH1
COQ8A
FAM236B
FAM236A
LRP2
SNX16
CRYBB2
TNRC6A
ARHGEF35
SYT2
ITPRIP
KLHDC9
BAIAP2L2
NBPF1
ELMOD1
EPN1
FANK1
POLN
HAUS3
MUC1
C16orf87
MTRNR2L8
SLITRK3
ELAVL2
SPDYE14
SPDYE10P
ARHGEF5
KRTAP9-6
LOC105370980
CLTC
MTRNR2L2
MSH3
DHFR
CPLX2
LYRM1
DCUN1D3
SCGB1C2
SCGB1C1
COL6A1
MROH9
TSR2
KRTAP2-4
UBAP2L
C1orf43
RABL6
ERRFI1
TES
CCDC200
CLDN20
TRIM48
RAPH1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NOTCH2
E2F3
EREG
PDE4DIP
ECHDC1
H3C13
H2BC18
MTRNR2L1
UBE2Z
SULT6B1
TMEFF2
SUV39H2
ZNF679
PDE6D
COPS7B
ANXA2
ACTB
C11orf97
SPATA16
SLC35B1
APPBP2
SIMC1
CBWD5
UBC
IDNK
H2BC21
H2AC21
H2AC20
CTAGE8
CTAGE4
HMGA2
ANTXR1
OR1F12
PDLIM5
LOC107986453
HNRNPA3
PCBP3
SHTN1
KRTAP10-12
RPL8
ZNF34
SRSF5
ARFGEF1
YBX3
SOX5
NAV3
LUZP2
ACTG1
ZNF718
ZNF595
DMBX1
H3C15
H3C14
H2AC19
H2AC18
MND1
CHEK1
RAB11FIP2
PIN4
TOB1
SPATC1L
TCERG1
NCOA5
GOPC
PCID2
CUL4A
TUBD1
RPS6KB1
DSCC1
SMNDC1
RNASE10
FLOT1
IER3
COMT
ZHX1-C8orf76
ZHX1
CLUL1
TXNRD2
ADAM15
SLC25A32
DCAF13
STRIP1
MFAP3L
FOSL1
TCF7L2
ARHGAP39
HNRNPA2B1
CBX3
STK3
UBR5
SLC12A8
EIF3F
NFE2L1
DHRS9
OR6P1
DIRAS2
GABRA2
CD163L1
FBXO11
GRHL2
EGR1
TMSB10
PCMTD1
PCDHB5
SRPRB
SLC25A3
HECTD3
ID1
USP25
PRKAR1A
VCP
UBE2O
AANAT
FH
CSNK1G3
H3C12
H2BC17
H2AC17
H3-2
FAHD2B
KRT19
PLA2G7
RPS20
MRPS23
RAB4A
CYP2A13
ZCCHC4
MFSD14B
PTEN
KLLN
SEC22B
NCK1
CSNK2A2
FRMD3
SRSF2
MFSD11
EEF1A1
ZNF280D
ERMARD
NGB
ABHD10
EBPL
RECK
ELOVL6
UBE2V1
LMBR1
H2AX
GALNT10
ATF1
CTNNA1
DTD1
LRRTM2
CPSF6
FMNL2
DR1
RMDN1
MAML1
BZW1
NEMP2
ZFP36L1
CPNE3
RXFP3
NSFL1C
TRIB1
PDXDC1
SLC16A5
XPC
LSM3
POLR2M
OGFOD3
HEXD
MRPS26
GNRH2
ZBTB38
FGGY
AREG
CXCL2
IQCF2
AFTPH
C7orf26
OSER1
GCFC2
ENTPD7
ZFP3
SLF1
KIAA0825
TMEM71
PHF20L1
HERC6
EXOC6
BRAF
CBR3
IGFBP4
SLC5A8
RPL18A
CKS2
VWA2
KRTAP2-2
KRTAP2-3
ZFP91
LPXN
SLTM
RCN2
GPD2
HMGB1
UBE2D1
SMARCD2
OGA
FAM8A1
ZNF800
NFE2L3
SEC61A1
KANSL1
LRRC58
RAD21
CEP55
DUSP5
PPP1CB
CIB2
CCSER1
TULP4
DUX4
CBWD3
PTMA
HDLBP
MALSU1
ANKRD18B
VANGL1
KRTAP2-1
TMEM43
CHCHD4
PLEKHA8
FKBP14
CHD1L
SMC6
GEN1
H2BC4
H2AC6
SLC30A5
FBXO34
RMI2
NMI
PCDHGA1
CTAGE15
CLDND1
DDX59
EXOC2
SGK3
FAM149A
METTL7B
NUTM2D
SCO1
ADPRM
CCDC88A
EXT1
EIF3A
SLC20A1
FAM120B
INPP5F
FDX1
XYLB
TRIM26
EPM2A
PSKH2
PCDHB8
PCDHB7
PSMC5
FTSJ3
RMND1
ARMT1
LRRC37A3
WDR43
RESF1
OXR1
MINPP1
SFT2D3
MTHFS
OR8B3
KCNS1
RNF151
NDUFB10
RPS2
H2BC11
H2AC11
SCAF4
UHMK1
FBXL4
APEH
TTC5
SIRT5
FAM160B1
CRPPA
PHTF1
FAM221A
SLC35F3
HNF4G
ADAD1
SRRM2
DUS1L
ZKSCAN1
NFKBIZ
NDUFAF6
INO80D
HSF1
BOP1
MIDEAS
MLYCD
CADM2
EGFR
TM4SF1
PCDHB13
SLC38A9
CBWD6
LRRC59
CLN5
PROSER1
NHLRC3
GRPEL1
LEPROTL1
SLC38A2
C5orf63
MTAP
NFIB
VPS36
CKAP2
SPG7
MAP2
GRK3
CHIC1
ITPRID1
DAZ4
DAZ3
WASF1
CDC40
FEM1B
NOMO3
GNAL
LOC100287896
LIPT2
GCLM
ENTPD6
FECH
H3-3B
FRG1
TTBK2
TFRC
TRRAP
DYNLL2
NCOA6
TKT
GPRC5C
KRTAP4-5
ACOX3
TRMT44
MKRN2OS
MKRN2
HNRNPL
ITGA6
WDR1
DENND4A
SH3BP5
KLHL7
SUPT20H
MAP3K21
MAEL
ILDR2
ENGASE
SNX9
PCDHB2
PCDHB3
MST1L
REXO1
STK40
DHX35
TXNDC12
BTF3L4
CUL1
SLC7A5
SCYL2
DEPDC4
GOLGA6L7
SPTBN1
UMOD
WDR4
CHMP7
EMB
PCLO
CDK17
ARRDC4
KITLG
NCKAP1
LRP11
RPS19
RAB18
POMGNT2
EPB41
C10orf95
LIG3
WASHC1
RAN
PAM
NDEL1
USP10
PPP1R2B
CABCOCO1
AK4
FKBP1A
ZSCAN25
IQGAP2
WDR45B
RNASEH1
JMJD1C
VEZF1
EXOSC7
ZDHHC3
TAPT1
HOMER1
TMEM268
MAP11
INPP4A
TMX4
BFSP1
ZNF664-RFLNA
ZNF664
CCDC92
ZBTB7C
FA2H
MLLT3
SARDH
SEPTIN4
PCDHA6
PCDHA5
TMEM70
ELOC
RPS6
USP36
PET117
KAT14
SMC3
TRIM25
NDFIP1
TPD52
PANX1
ATMIN
EHD4
REST
C1QTNF12
SYBU
SPHKAP
PTK2
VOPP1
NFRKB
NOCT
IMPACT
CKAP5
ODC1
ERN1
EIF5A
DIS3
RANBP9
GEMIN4
CLK4
PTPRA
C3orf70
XKR6
ZFHX3
TMEM202
MYZAP
GCOM1
CDK8
ABRAXAS2
DDX1
TMED7-TICAM2
TMED7
NXF1
ARL17B
MCL1
ASAP1
KCTD18
ZNF124
PDCD5
LRRCC1
SPEF2
LPGAT1
XPR1
ATP2A2
DEPDC7
FUCA2
SLC7A1
SLC35G5
BANP
DNM1L
FAM207A
UBE2J2
MUS81
CFL1
TRMT1L
SWT1
TIMM23B
PARG
CPOX
YBX1
LYST
GRK5
KAZALD1
LGALSL
PCDHB12
ZNF337
UBE2B
CDKL3
DNAJC25-GNG10
DNAJC25
R3HDM2
INHBC
CLK1
SREBF1
CD38
IDH2
TYMSOS
TYMS
CST3
MALL
SH3D19
TCL1A
KRTAP9-2
STX18
PEX3
ADAT2
STX10
IER2
LOC100289561
ARSG
PELI1
PER2
PTDSS1
MTERF3
TRIM47
TIFA
SLC16A6
CFLAR
TBC1D5
SLC25A36
ARHGAP31
MKI67
NDUFA6
KANK1
MAP3K14
PCTP
FAM220A
DSE
CEP68
RWDD3
GMNC
PKP4
CCDC148
TSPYL4
HOXB9
GBP2
RORB
LAMA2
SEC13
KPNA1
MFSD14C
EIF4A3
RABEP1
PSTK
RAD23B
GAPDH
SMAP2
TMEM65
AEN
TRIM39-RPP21
TRIM39
PTS
DYNC1LI1
CXorf38
LOC100996750
KRTAP4-7
COG1
PIGO
MLEC
CD55
AP3M2
CITED2
TRIP12
FBXO36
HDDC2
CNP
ZDHHC7
SLC25A4
SULT1B1
MYO5A
TWSG1
STEAP3
MIB1
PLAAT1
MORC4
PSD3
ZFP42
SLCO6A1
WAPL
SOD2
WTAP
TXNDC15
TMEM229B
ELAC1
H3C10
H2BC13
H2AC13
KDF1
YPEL2
IQSEC3
INTS6
POLR2D
C9orf85
ABHD17B
TMEM251
MOAP1
NTAQ1
GSTO1
PTP4A1
SLURP1
GCSH
PLEKHH1
SCN8A
PRAMEF33
PRAMEF10
OTOP1
SERP1
EIF2A
GHITM
KDM3A
ZNF623
TBCD
JOSD1
GTPBP1
RFX3
APBB1IP
DBP
MIF
ARHGAP32
NEDD4
ARHGAP29
MAFF
KRT1
DPY19L2
MUC12
ANO2
ATP6V0B
B4GALT2
AMMECR1L
ADAR
STK35
RALY
CPT2
PXK
OCIAD2
APOLD1
NUP50
CA8
BAG3
KRTAP4-12
MPP7
SPOPL
PDCD4
SLC12A5
SPX
ZNF80
TBC1D3H
TBC1D3G
CASR
BOD1
MMACHC
C7orf25
TIMM23
KMT2E
DDX42
CCDC47
TEX9
RFX7
SMIM19
SLC20A2
CEBPG
MTUS1
TAB2
TDRD7
ZBTB34
ADI1
KLHL9
REEP3
PITPNC1
DDX17
BACH1
UNC79
BTBD7
CMTM7
NKIRAS1
EIF2D
KBTBD8
TMEM109
SRRT
ERI1
NFYC
CUL7
CENPS-CORT
CENPS
PRDM2
BLCAP
RNF32
NR1D2
BCAP29
PARD6B
STRIP2
GNPNAT1
EFR3A
TOMM34
TLK2
OAT
PANK1
MAGI3
ARHGAP42
NANOS1
DSG2
AXL
PATJ
CYTL1
RBL2
RPL35
ARPC5L
ELMO2
HSBP1
DDT
C1orf53
DBNDD1
DHRS13
SETD3
CCNK
TBCEL-TECTA
TBCEL
GLRX2
BRD3OS
MBTPS1
TXN
ZNF441
MAP3K5
JAK1
SMCO4
BTBD3
KRT8
RTKN2
SRCIN1
GAS8
HTATIP2
PTPRD
KRT18
PARK7
MAP3K7CL
GORASP2
CCT8
ATXN7L2
OTUD7B
ADNP
C5orf51
TNRC6B
BORCS5
POLR2K
FBXO43
AZIN1
UBN2
UBE2L3
PKD1
KPNA2
ITSN2
SPTLC2
NUDT18
GGCT
FAT1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
ALOX5
ADNP2
ZNF462
SLMAP
RAD54L2
MCMBP
AGK
RUBCN
HNRNPD
RPL14
CYP51A1
SP3
NPM1
SLC39A8
HESX1
APPL1
NCOR2
EGLN1
ANKRD36C
ZFAND5
COLEC11
MICALL2
LRP5
AMOTL2
CDYL2
BMP4
TSPYL5
SERPINB9
PDE8B
RCAN1
PCYT1A
IREB2
SAAL1
HNRNPUL1
PPP2R5A
TGFBR2
PUM2
NUDT4B
NUDT4
P4HB
ENTPD4
FBXL5
TPGS2
ARSB
SEMA7A
HELZ
ACTR5
FZD6
KRTAP10-2
CLEC4C
SPHK2
RPL18
FAM83E
MSL2
TEX46
KDM1A
TRIM35
PTK2B
SUGCT
MPLKIP
CCZ1
NBN
FBXW4
PITX3
GBF1
NMT2
UQCRFS1
SLC38A10
PTPN4
PKD2L2
CCDC149
TRIB3
ANKRD36B
FBXL13
ARMC10
ORAI1
HYOU1
SDCBP
CCSER2
NUDCD2
HMMR
HSPG2
HLA-B
MOXD1
PCDHB10
CPXM2
AKIRIN2
IPO8
NFATC3
SNX19
PRPF19
THAP12
GVQW3
UBE2D3
RPL13
NUFIP2
STAMBPL1
AGO3
RPE
MMAA
MAPRE2
TERF2IP
KARS1
ANKRD46
GLCE
SYNCRIP
PARP8
SCOC
PM20D2
PARD3B
KLHL2
MSRB2
IMPA2
CASD1
TMED3
HYI
HEG1
ROCK1
ARNTL
MYEF2
CTXN2
SNPH
SLC45A3
SLC25A52
KLHL41
FSTL1
DDIT4L
CTAGE6
C10orf53
ACCSL
CTDP1
FOXJ3
RPL6
SZT2
MED8
PTPN11
EHBP1
TWF1
BTF3
RNF103-CHMP3
RMND5A
CMTR2
RASAL2
YWHAZ
GALNT7
PTPN12
PLEKHG2
SFXN1