List of Data Metadata
| Data name ⇅ | Database name ⇅ | DOI ⇅ | Description of data contents ⇅ | Data file ⇅ | Simple search URL ⇅ | Data acquisition method ⇅ | Data analysis method ⇅ | Number of data entries ⇅ | Data detail |
|---|---|---|---|---|---|---|---|---|---|
| CEL file attachments | Open TG-GATEs | 10.18908/lsdba.nbdc00954-01-013 |
This dataset merged seven datasets (CEL file attributes, Cell sample, Cell viability, Individual list, Organ weight, Hematology, and Biochemistry) into one. Each zip file you can download from "Gene expression data", includes the related part of this dataset as a TSV file named "Attributes.tsv". |
Open-tggates_AllAttribute.zip
(1.8 MB) |
http://togodb.biosciencedbc.jp/togodb/view/open_tggates_attribute#en |
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33,566 entries |
Data detail
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| CEL file attributes | Open TG-GATEs | 10.18908/lsdba.nbdc00954-01-003 |
List of attribute information explain about each CEL file. |
open_tggates_cel_file_attribute.zip
(199 KB) |
http://togodb.biosciencedbc.jp/togodb/view/open_tggates_cel_file_attribute#en |
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24,023 entries |
Data detail
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| Cell sample | Open TG-GATEs | 10.18908/lsdba.nbdc00954-01-004 |
The list of liver cell samples from which gene expression and toxicity (cell viability) data were acquired. |
open_tggates_cell.zip
(54 KB) |
http://togodb.biosciencedbc.jp/togodb/view/open_tggates_cell#en |
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5,990 entries |
Data detail
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| Cell viability | Open TG-GATEs | 10.18908/lsdba.nbdc00954-01-005 |
The list of liver cell viability data obtained from in vitro tests. |
open_tggates_cell_viablity.zip
(51 KB) |
http://togodb.biosciencedbc.jp/togodb/view/open_tggates_cell_viability#en |
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5,986 entries |
Data detail
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| Compound list | Open TG-GATEs | 10.18908/lsdba.nbdc00954-01-001 |
Compiled list of compounds and links to gene expression data and its attribute information of each compound in Open TG-GATEs. |
open_tggates_main.zip
(6.4 KB) |
http://togodb.biosciencedbc.jp/togodb/view/open_tggates_main#en |
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170 entries |
Data detail
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| Data name | Database name | DOI | Description of data contents | Data file | Simple search URL | Data acquisition method | Data analysis method | Number of data entries | Data detail |