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About This Database

Compound list

Data description
Data name
Compound list
DOI
10.18908/lsdba.nbdc00954-01-001
Description of data contents
Compiled list of compounds and links to gene expression data and its attribute information of each compound in Open TG-GATEs.
Data file
File name :
open_tggates_main.zip
File URL :
File size :
6.4 KB
Simple search URL
http://togodb.biosciencedbc.jp/togodb/view/open_tggates_main#en
Data acquisition method

-
Data analysis method

-
Number of data entries

170 entries
Data detail
Data item Description
COMPOUND_NAME

Compound name
COMPOUND_ABBREVIATION

Abbreviated compound name
COMPOUND_NO

Number assigned to each compound. Numbers are not in serial order.
Human - in vitro

Gene expression data of in vitro tests with human liver cells (Link to a zip file which contains multiple CEL files)
Rat - in vitro

Gene expression data of in vitro tests with rat liver cells (Link to a zip file which contains multiple CEL files)
Rat - in vivo - Liver - Single

Gene expression data of single-dose in vivo tests with rat liver (Link to a zip file which contains multiple CEL files)
Rat - in vivo - Liver - Repeat

Gene expression data of repeat-dose in vivo tests with rat liver (Link to a zip file which contains multiple CEL files)
Rat - in vivo - Kidney - Single

Gene expression data of single-dose in vivo tests with rat kidney (Link to a zip file which contains multiple CEL files)
Rat - in vivo - Kidney - Repeat

Gene expression data of repeat-dose in vivo tests with rat kidney (Link to a zip file which contains multiple CEL files)
Pathological items (Liver)

Pathological findings and slide images of in vivo tests with rat liver (Link to "Pathological items", "Pathological images" and "CEL file attributes")
Pathological items (Kidney)

Pathological findings and slide images of in vivo tests with rat kidney (Link to "Pathological items", "Pathological images" and "CEL file attributes")