ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388070 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◣ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Snx18
Cars
Nfe2
Pgk1
Ascl1
Tcstv3
Cldn34d
Atg4c
Zfp879
Gas2
Fancf
Brox
Aida
Onecut2
Kdm4c
Gm4791
Lmo3
Sema6d
Frmd4a
Cdk19
Kpna1
Abhd6
Sipa1l1
Rab38
Pakap
Ubxn10
Pla2g2c
Mcf2
Spp2
Nrp1
Sema5b
Krt8
Daam1
Nptx2
Nt5c2
Ina
Lmo1
Usp25
Olfr806
Pmfbp1
Col6a6
Dock10
Nnt
Lrrc52
Mid2
Pla2g2d
Uts2b
Nhsl1
Akap17b
Abracl
Olfr1046
Neurod1
Sspn
Tmem30c
Il31ra
Ifnb1
Atp2b2
4921524J17Rik
Sepsecs
Mpp4
Snca
Rab3gap1
Oasl1
Arid1b
Psmc6
Zfp516
Enc1
Enox1
Ntn1
Lmo4
Aadacl2fm1
Ypel1
Dennd11
Gnat2
Bambi
Mnx1
Pcdh1
Rnase12
Rnase11
Fezf2
Edar
Kcng3
Plekhh3
Cntnap1
Ccr10
Hoxa1
Saxo2
Efl1
Ebf2
Pgpep1l
Slc25a35
Rangrf
Ubqln4
Lamtor2
Sulf2
Raet1d
Prkab1
Olfr1286
Gabrg2
Gm5820
Esr1
Unc5c
Celf4
Gdf5
Tnfrsf19
Neil1
St3gal1
Rab27a
Asmt
Serpinb2
Ddx19b
Lsm14a
Morc1
Cldn3
L3hypdh
Jkamp
1600014C23Rik
Lrrtm4
Kifc3
Tbpl1
Ttc32
Xylt2
Bin2
Chst7
Slc6a5
Slc17a8
Rtn1
Raet1e
Raet1c
Raet1b
Epn2
Thrb
Htr3a
Coro2a
Apbb2
Gja5
Zkscan1
Ndufaf4
Cfap36
Tshz2
Tmco5
Hoxc10
Lrmp
Chmp1b
Ttll3
Hmga1b
Hmga1
Phc2
Mrap
Gcgr
Rasl11a
Zfp608
Myh3
Lef1
Ccdc107
Vmn2r82
Lrrn2
Sytl2
Tspan15
Bcas2
Morf4l1b
Sostdc1
Eml1
Nfe2l3
Sdk2
Acbd5
Tshr
Trp53bp1
Rabepk
Pcbd2
Nutm1
Nop10
Pxylp1
Qrfpr
Tagln3
Gm4861
Nim1k
Fam171b
Timm9
2700049A03Rik
Lima1
Ssu72
Nckap5
Aen
Cdca7
Fam43a
Angpt1
Chrna4
Ccr6
Slc35f3
Cacng4
Pkdcc
Knl1
Foxd3
Csf2ra
Dll1
Zfp217
Alkbh5
Angpt2
Zeb2
Kcnh8
Etl4
Olfr107
Atp5g2
Ttc34
Homer2
Foxp1
Lix1
Tmeff1
Pde7b
Bhlhe22
Ccnq
Irgm2
Wee2
Apbb1
Ifna13
Gm14326
Arid5a
Cbx5
Ebf3
Fgfr2
Crybg3
Olfr846
Galr3
Gspt1
Lhx5
Esrrb
Ust
Bsx
AI429214
Zbtb8a
Onecut3
Myt1l
Cybb
Rbm47
Oser1
Spcs3
Dhrs7
Dip2b
Ctbp2
Vmn2r2
Tmcc2
Ttc23
Lrrc28
Rnf182
Ndst1
Pgrmc2
Grpel1
Fndc3b
Foxa2
Mia3
a
Gcn1
Adamts18
Slc44a1
Trub1
Ppia
Aebp2
Mrps33
Ptpn12
Eef1akmt1
Cyp2j12
Zfp423
Iqschfp
Iqcj
Atp8b4
Dennd4a
Lig3
Sash1
Smad5
4930503B20Rik
Sfi1
Cdh12
Peli3
Ntn4
Vnn1
Vmn2r102
Mbp
Kirrel
Ank3
Pias1
Myo1b
Cemip2
Rcor3
Slc10a4
Plekhm1
Sncaip
Taf12
Uncx
Tamm41
Stk33
Nup93
Fbxo31
Hadh
Cd36
Ubr5
Sgo2a
Nrf1
Dpf2
Myl1
Nr6a1
Kcnn2
Gpr139
Tmem156
Baz2b
Gas1
Ush2a
Copz1
Taf1d
4931406C07Rik
Olfr492
Zcrb1
Pphln1
Rbm27
Kat2a
Hspb9
Slc25a40
Dbf4
Cdh23
Znrf4
Dipk1c
Trex1
Shisa5
Ccpg1os
Ccpg1
Phc1
Dnajb8
Pxn
Pcdh12
Hmgxb4
Zfp703
Creb3l1
Lrrc4c
Atp6v0a1
Abca4
Arhgef33
Olfml1
Grm4
Arxes2
Pdlim3
Tjp2
Dusp23
Gm5165
Gm14325
Gm51425
Arhgap36
Btla
Arhgap33
Fgf1
Shroom4
Zfp3
Vax1
Rgs8
Ror1
Hacd4
Ptprz1
Spaca7
Kdm2b
Mup4
Raph1
Gm14410
Cilp
Cfap54
Sms
Prkar2b
Olfr1282
Acadl
Ubiad1
Mtor
Nol4
Chd7
Laptm4b
Myef2
Tm4sf4
Emb
Ext1
Fgd4
Ankrd36
Pdlim1
Zfp715
Tmem178b
Olfr60
Serac1
Gtf2h5
Zfp960
Mylk
Ldlr
Sctr
Slc10a1
Gm7244
Abi2
Lats2
Nfkbil1
Atp6v1g2
Mamdc2
Wdcp
Prkab2
Sh3glb2
Miga2
Hopx
Gpm6b
F2rl1
Taar9
Smco4
Xrcc6
Desi1
Zfhx4
Slc7a7
Kctd9
Cdca2
Tbc1d23
Cipc
Ankrd50
Arap1
Plekha1
Trim2
Rnase4
Ang
Zdhhc16
Exosc1
Tnip3
D7Ertd443e
Id3
Asf1b
Zfp931
Lama2
Ackr1
Dct
Zcchc24
Tnks2
Gm8165
Zfp663
Atp8a1
Kdm3b
Cnpy1
Psap
Spx
Taar7b
Dchs2
Mest
Bdnf
Efna5
Nfatc4
Sall4
Hapln1
Ppp1r17
Adtrp
Gm15319
Fzd5
Adar
Cacng1
Zfp869
Srek1ip1
Fech
Rce1
Zfp260
Cyth3
Cyyr1
Myt1
Sec24b
Rps19
Cdh20
Cd59a
Gm6710
Gm14391
Filip1
Cdh24
Kcnh2
Prkaa1
Klf6
Mrps25
2510009E07Rik
Ppp3ca
Sv2a
Msi1
Akr1b3
Pax6
Tbr1
Aqr
Arid4a
Zfp707
Col11a1
Fbln1
Zbtb18
Scml4
Tcf7l1
Tmem107
Slc25a25
Prpf40a
Arl6ip6
Atg7
Gm21119
Mro
Otol1
Tent5a
Zfp91
Lpxn
Usp44
Kcnj16
Skap1
Slc39a10
Erg
Sem1
Tcf15
Baz1a
Kdm1a
Zfp991
Mobp
Cul2
Cacna1c
Olfr108
Ttc30a2
Arid3b
Aff1
Ptpro
Mad1l1
Hacd3
Pop5
Bcas1
Optn
Mfng
Rxrg
Nt5e
Hesx1
Tle3
Gramd1b
Uqcc3
Lbhd1
Gm38396
Phactr3
Ogn
Chmp6
Zfp97
Lingo3
Gm29797
2210418O10Rik
Arhgap28
Lama1
Riok3
Arhgef2
C2cd5
Cfap43
Cibar2
Fbxo32
Cotl1
Gm17026
Fam13b
Lipm
Toporsl
Vmn2r5
Prtg
Klhl29
Irx5
Piwil1
Ilvbl
Arhgef18
Arid1a
Vmn2r24
Bnc2
Cbx1
Trafd1
Rorb
Insyn2b
Zfyve26
Rad51b
Cyth1
Nrep
Lpar6
Gnai1
Inip
Mbtps2
Rln3
Il27ra
Usp15
Tenm2
Kitl
Nr4a2
Sh2d4a
Mpzl1
Muc15
Mrvi1
4930467E23Rik
Olfr62
Erbb4
Synpo
Ehmt2
Gm17124
Mgat4a
Jmjd1c
BC048507
Impdh2
Smug1
Lgals12
Ppp3r1
Dnaic2
Mical3
Tti2
Mical2
Fgf15
Pitpnm1
Mrpl22
Gemin5
Myo1e
Eif4e1b
Gm11837
Ranbp9
Gm14296
Armh4
Lrig3
Gm3173
Gm9508
Tyr
Csta3
Atp1a1
Nt5c3b
Klhl10
Neurod4
Scg2
Micu2
Fam222b
Barhl1
Irx4
Ucma
Skil
Rps10
Ppfia4
Cyp2b10
Negr1
Wdr17
Cyp7a1
Cep350
Ttc30b
Megf9
Snw1
Actn4
Stk32a
Zfp984
Ubap1l
Mrpl45
Wbp2nl
Tbc1d9
Dpp10
Myl12a
Upf3a
Add1
Myo10
Slc9a9
Lrp2bp
Atxn7l1
Fzd8
Iapp
Mrps28
Vtcn1
Pcbp4
Abhd14b
Gng3
Bscl2
Rexo1
Spidr
Hmcn1
Dstn
Sacs
Map7
Cd200
Ptms
Gpr137
Bad
Inpp4b
Slc16a7
Krt222
Zfp473
Vrk3
Ankrd6
Npffr2
Bcar3
Eif2d
Cdc42ep3
Arap2
Crx
Taar6
Ppp1r2
Erich3
Jagn1
Amacr
Xrcc5
Zbtb2
Txndc2
Vmn2r4
Tmem202
Wwox
Ptpn14
Olfr1532-ps1
Tra2a
Lefty2
Zfp462
4930474N05Rik
Pclo
Pde4b
Otx2
Scd3
Lag3
Ppp2r2b
Accsl
Gm3752
Mageh1
Ablim1
Commd4
Gnas
Gja1
Armc3
Kcnk2
Zfp979
Rnase9
Ddx6
Gm6712
Zc3h12c
Chpt1
Rdm1
Sohlh2
Cldn14
Ppp6r3
Lrrc10b
Osgin2
Fbxw2
Prph
B3galt5
Asb4
Radil
Acat3
Ncoa4
Elmo2
Ccdc171
Tac4
Caly
Trim24
Tmc5
Olfr1240
Col3a1
Elavl2
Chn1
Colec12
Sox2
Alk
Pex5l
Tsc22d1
Acaa2
St6gal1
Vangl2
Lingo2
Gm3739
Acp6
Tcaf1
Jup
Fzd10
Arid5b
Atxn1
A1bg
Rps12
Col12a1
Rragd
Zic3
Gm1113
Gm3696
Gpr141
Kifc1
Cep120
Xkr5
Bcor
Zmym2
Tmem30a
Acyp1
Tcl1b3
Tyro3
Optc
Cenpv
Pgm5
Alpk3
Rdh11
Gfra3
Tmem37
Shroom3
Otud1
Hey2
Sec61g
Stk38
Abr
Bms1
Epb41l3
Prps1
Zfp534
Pop4
Exosc9
Gm4907
Ptpn9
Zfp980
H1f0
Gcat
Lmx1b
Rfx4
Th
Fam110b
Hhip
Il18rap
Sptlc2
Skor1
2610042L04Rik
Vgll1
Ndufa4l2
Rab5a
Srp19
Cast
Rag1
Ank2
Irs4
Acvr2a
Zfp382
Vkorc1l1
Drd2
Apobec2
Lhx9
Meox1
Otx1
Has2
Grik3
Pik3ap1
Pipox
Smad2
Fbxo7
Gm2956
Asic5
Asic1
Myb
Plcd3
Acbd4
Phlpp1
Kcnv2
Spns1
Spock3
Cog3
Zbtb11
Ints4
Fkbp5
Tctex1d1
Grap2
Pdha1
Neurog2
Thsd7a
Atp2c1
Sh2d7
Sox5
Smarcal1
Smndc1
Otoa
Unc13b
Nbdy
Rraga
Zfpm1
Zfp985
Plekhg2
Fabp7
Atp6v1e2
Nxph4
Hspa8
Gpr1
Clasp2
Zfp385b
Zmat4
Usp1
Gatad1
Cep112
Por
Lsm1
Bag4
Lrrc30
Lrpap1
Errfi1
Gtdc1
Trio
Rnf43
Rgmb
Syt2
Ncoa3
Gm10406
Phyh
Myl12b
Tmem273
Pcnx
Zc3h4
Drg1
Trhde
Rex2
Dusp4
Cldn10
Tcf12
Cga
Tdg
Runx1t1
Mroh1
Rbfox2
Gipc2
Creb5
Lims1
Crppa
Synpr
Sirt4
Mov10l1
Mlc1
Fam76b
Cep57
Lipg
Frem1
Nmnat3
Nemf
Cd300lg
Tfeb
Zfp987
Selenos
Arhgef28
Ifitm2
Ccng1
Traf3ip1
Hmx1
H2-T23
Abcd3
Acpp
Ccn2
Foxb1
Mlxip
Mcur1
Tmem74
Wdr95
Pkmyt1
Ccdc88c
Naa40
Cry1
Slc25a19
Sulf1
Nkx3-2
Pak2
Tex2
Rnf38
Efnb2
Nars
Gmnn
Eya1
Agtr2
H3c11
H2bc22
H2ac22
Acvr1c
Mcub
Rab5b
Sox4
Galc
Reep3
Thg1l
Gm10710
Prkcq
Ermn
Tmem125
Ovca2
Polr2m
Tcerg1
Rnf2
Itprid1
Pde11a
Dll4
Rsph4a
Rwdd1
Anxa2
Agpat3
Pbld2
Hnrnph3
B4galt5
Slc19a3
Fap
Slc48a1
Tesk2
Adgrg7
Gm20594
Rbms1
Nbeal2
Ccdc12
Slc20a1
Sall1
Rtraf
Nkx3-1
Hoxb2
Alcam
Zranb1
Myoz1
Zfp212
Tuba1b
Med25
Fuz
Cacna1i
Cdk14
Pdgfc
Tdrd3