ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706976 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◣ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Tcstv3
Snx18
Cars
Kank1
Nfe2
Ubxn10
Pla2g2c
Usp25
Lrrc52
Zfp608
Frmd4a
Nrp1
Atg4c
Kdm4c
Zfp879
Zfp516
Cdk19
Spp2
Vax1
Gas2
Fancf
Sipa1l1
Mcf2
Ndufaf4
Copz1
Myt1l
Tagln3
Slc17a8
Sema6d
Nptx2
Sepsecs
Fam171b
Cldn3
Alkbh5
Arid1b
Raet1d
Fezf2
Olfr806
Daam1
Abhd6
Ypel1
Lmo1
Cldn34d
Snca
Coro2a
Chst7
Bhlhe22
Psmc6
Tnfrsf19
Nt5c2
Ina
Ttc32
Pmfbp1
Morc1
Rnase12
Rnase11
Lix1
Raet1e
Raet1c
Raet1b
Vmn2r2
Lmo4
Taf1d
4931406C07Rik
Zkscan1
Grpel1
Zfhx4
Col6a6
Timm9
2700049A03Rik
Atp2b2
Tti2
Htr3a
Lrmp
Gm5820
Kat2a
Hspb9
Hmgxb4
Tmem178b
Mid2
4921524J17Rik
Slc10a4
Myo10
Med25
Fuz
Dpf2
Chmp1b
Tmeff1
Dip2b
Prkab1
Ust
Neil1
Ptpn12
Olfr1532-ps1
Tspan15
Gabrg2
Olfr1286
Olfml1
Vmn2r5
Dct
Prkab2
Brox
Aida
Zfp663
Gm3173
Gnat2
Kcng3
Olfr1046
Ndst1
Wwox
Knl1
Spaca7
Edar
Fam43a
Ppia
Dusp23
Ank3
Neurod1
Mical2
Cfap36
Crybg3
Ifnb1
Filip1
Th
Gm3752
Gm2956
Cdh12
Stk32a
Ntn1
Ubqln4
Lamtor2
Tmco5
Tmcc2
Erg
Tshz2
St3gal1
Rtn1
Lrrn2
Bcas2
Foxp1
Efna5
Chn1
Angpt2
Krt8
Arap1
Ppp3ca
Hspa8
Lingo4
Mrps28
Kcnn2
Gm5165
Olfr1282
Peli3
AI429214
Mobp
Nrf1
Gja5
Pkdcc
Olfr846
Eml1
Etl4
Foxd3
Apbb2
Gm4791
Lrrtm4
Gm51425
Lmo3
Dstn
Celf4
Ctbp2
Ttll3
Dennd4a
Zfp827
Atp6v0a1
Pxylp1
Kitl
1600014C23Rik
Dipk1c
Elmo2
Rab38
Sohlh2
Gap43
Lsm14a
Slc6a5
Ppfia4
Enox1
Olfr60
Taf12
Gm7244
Mrap
Gdf5
Mageh1
Rasl11a
Fbxo31
Akt3
Il31ra
Pde7b
Eef1akmt1
Nr6a1
Saxo2
Efl1
Acyp1
4930503B20Rik
Gm7592
Cacng1
Vmn2r7
Trex1
Shisa5
Dll1
Ferd3l
Tmem74
Sh2d7
Acbd5
Zdhhc16
Exosc1
Gm3739
Piwil1
Grb2
Pygl
Tmem202
Dcaf15
Gm14325
Fam110b
Schip1
Zfp869
Crppa
Maged1
Rdm1
Abracl
Mrpl22
Gemin5
Tnks2
Ech1
Bambi
Lhx5
Atp6v1e2
Ppp1r2
Adtrp
Kpna1
Zfp260
Ormdl3
Mnx1
L3hypdh
Jkamp
Bin2
Prtg
Muc15
Rnf2
Tmem242
Acacb
Nhsl1
Asmt
Cfap54
Vnn1
Sema5b
Inip
Sspn
Fgd4
Thrb
Pbld2
Hnrnph3
Sytl2
Oasl1
Slc25a25
Ntn4
Gpm6b
Skil
Krt26
Rce1
Trp53bp1
Ankrd50
Cacng4
Uts2b
Lrrc4c
Usp44
Tcf15
Wdr17
Rnase9
Zfpm1
Trafd1
Grm4
Zfp217
Plekhg2
Trub1
Nacc2
Baz2b
Bcar3
Tbpl1
Zfp991
Raph1
Gm14326
Cd300lg
Slc10a1
Vmn2r4
Fgf12
Ccdc107
Hmga1b
Hmga1
Negr1
Adamts18
Bsx
Tamm41
Gm6710
Gm14391
Rufy3
Akr1e1
Asf1b
Lrrtm1
Arhgap36
Myl1
Psme4
Rab3gap1
Hes7
Aloxe3
Fbxo32
Tmem107
Gm3411
Ccdc88c
Cnpy1
Smco4
Atxn1
Crtam
Romo1
Nfs1
Apbb1
Gpr139
Fech
Pgk1
Pakap
Akap17b
Sostdc1
Mpp4
Hoxc10
Nnt
Ascl1
Plekhh3
Cntnap1
Ccr10
Pgpep1l
Hoxa1
Esrrb
Dock10
Irgm2
Tmem30c
Olfr492
Enc1
Sash1
Zcrb1
Pphln1
Cybb
Pcdh1
Cbx5
Rbm27
Rbm47
Qrfpr
Lef1
Slc25a40
Dbf4
Cdh23
Znrf4
Wee2
Ccpg1os
Ccpg1
Sulf2
Ddx19b
Rab27a
Phc1
Ccr6
Dnajb8
Pxn
Zbtb8a
Pcdh12
Angpt1
Dennd11
Zfp703
Kifc3
Onecut2
Creb3l1
Abca4
Morf4l1b
Arhgef33
Fndc3b
Arxes2
Pdlim3
Tjp2
Mia3
Unc5c
Xylt2
Hadh
Btla
Oser1
Arhgap33
Fgf1
Shroom4
Zfp3
Rgs8
Ror1
Hacd4
Aen
Ptprz1
Kdm2b
Mup4
Gm4861
Cyp2j12
Gm14410
Phc2
Cilp
Sms
Prkar2b
Olfr107
Acadl
Ubiad1
Mtor
Nol4
Chd7
Csf2ra
Laptm4b
Myef2
Tm4sf4
Zeb2
Emb
Ext1
Galr3
Kcnh8
Atp5g2
Ankrd36
Pdlim1
Zfp715
Serac1
Gtf2h5
Zfp960
Myo1b
Mylk
Ldlr
Sctr
Abi2
Lats2
Tshr
Nfkbil1
Atp6v1g2
Pla2g2d
Mamdc2
Wdcp
Nutm1
Nop10
Sh3glb2
Miga2
Hopx
F2rl1
Taar9
Xrcc6
Desi1
Slc7a7
Onecut3
Kctd9
Cdca2
Slc25a35
Rangrf
Tbc1d23
Cipc
Plekha1
Trim2
Rnase4
Ang
Tnip3
D7Ertd443e
Lima1
Epn2
Id3
Zfp931
Lama2
Ackr1
Zcchc24
Ssu72
Plekhm1
Gm8165
Atp8a1
Kdm3b
Psap
Spx
Taar7b
Dchs2
Mest
Bdnf
Nfatc4
Sall4
a
Hapln1
Ppp1r17
Vmn2r82
Gm15319
Ebf3
Fzd5
Adar
Srek1ip1
Cyth3
Cyyr1
Myt1
Chrna4
Sec24b
Rps19
Myh3
Cdh20
Cd59a
Cdh24
Kcnh2
Prkaa1
Klf6
Mrps25
2510009E07Rik
Sv2a
Msi1
Akr1b3
Pax6
Nfe2l3
Vmn2r102
Tbr1
Aqr
Stk33
Arid4a
Serpinb2
Zfp707
Col11a1
Nup93
Fbln1
Zbtb18
Fgfr2
Scml4
Tcf7l1
Atp8b4
Nim1k
Ifna13
Prpf40a
Arl6ip6
Atg7
Esr1
Gm21119
Mro
Cdca7
Otol1
Tent5a
Lig3
Zfp91
Lpxn
Mrps33
Kcnj16
Skap1
Slc39a10
Sem1
Baz1a
Kdm1a
Slc35f3
Cul2
Cacna1c
Olfr108
Ttc30a2
Arid3b
Aff1
Ptpro
Mad1l1
Hacd3
Pop5
Bcas1
Optn
Mfng
Rxrg
Nt5e
Hesx1
Tle3
Ccnq
Gramd1b
Uqcc3
Lbhd1
Gm38396
Phactr3
Ogn
Chmp6
Zfp97
Lingo3
Aadacl2fm1
Gm29797
2210418O10Rik
Arhgap28
Pcbd2
Lama1
Riok3
Arhgef2
C2cd5
Cfap43
Cibar2
Cotl1
Gm17026
Fam13b
Lipm
Toporsl
Klhl29
Irx5
Ilvbl
Arhgef18
Ebf2
Arid1a
Vmn2r24
Bnc2
Cbx1
Rorb
Insyn2b
Zfyve26
Rad51b
Cyth1
Nrep
Gspt1
Lpar6
Gnai1
Mbtps2
Rln3
Il27ra
Usp15
Tenm2
Nr4a2
Sh2d4a
Rabepk
Mpzl1
Mrvi1
4930467E23Rik
Olfr62
Erbb4
Synpo
Ehmt2
Gm17124
Mgat4a
Jmjd1c
BC048507
Ubr5
Impdh2
Sfi1
Smug1
Homer2
Lgals12
Ppp3r1
Dnaic2
Mical3
Foxa2
Fgf15
Pitpnm1
Myo1e
Mbp
Eif4e1b
Gm11837
Ranbp9
Gm14296
Armh4
Gcgr
Lrig3
Rcor3
Gm9508
Tyr
Csta3
Atp1a1
Nt5c3b
Klhl10
Neurod4
Scg2
Micu2
Fam222b
Barhl1
Irx4
Ucma
Rps10
Cyp2b10
Cyp7a1
Cep350
Ttc30b
Megf9
Snw1
Actn4
Gcn1
Zfp984
Ubap1l
Mrpl45
Wbp2nl
Tbc1d9
Dpp10
Myl12a
Upf3a
Add1
Slc9a9
Lrp2bp
Atxn7l1
Fzd8
Iapp
Zfp423
Iqschfp
Iqcj
Vtcn1
Pcbp4
Abhd14b
Gng3
Bscl2
Rexo1
Spidr
Hmcn1
Sacs
Map7
Cd200
Ptms
Gpr137
Bad
Inpp4b
Slc16a7
Krt222
Zfp473
Vrk3
Ankrd6
Npffr2
Eif2d
Ush2a
Cdc42ep3
Arap2
Crx
Taar6
Erich3
Jagn1
Amacr
Xrcc5
Zbtb2
Txndc2
Ptpn14
Tra2a
Lefty2
Zfp462
4930474N05Rik
Pclo
Pde4b
Otx2
Scd3
Lag3
Ppp2r2b
Accsl
Ablim1
Commd4
Gnas
Gja1
Smad5
Armc3
Kcnk2
Zfp979
Ddx6
Gm6712
Zc3h12c
Chpt1
Cldn14
Ppp6r3
Lrrc10b
Osgin2
Fbxw2
Prph
B3galt5
Asb4
Radil
Acat3
Ncoa4
Sdk2
Ccdc171
Tac4
Caly
Trim24
Tmc5
Olfr1240
Col3a1
Elavl2
Colec12
Sox2
Alk
Pex5l
Tsc22d1
Acaa2
St6gal1
Vangl2
Lingo2
Acp6
Tcaf1
Jup
Fzd10
Arid5b
A1bg
Rps12
Col12a1
Rragd
Zic3
Gm1113
Gm3696
Gpr141
Kifc1
Cep120
Xkr5
Bcor
Zmym2
Tmem30a
Tcl1b3
Tyro3
Ttc23
Lrrc28
Optc
Cenpv
Pgm5
Alpk3
Rdh11
Gfra3
Tmem37
Shroom3
Otud1
Hey2
Sec61g
Stk38
Abr
Bms1
Epb41l3
Prps1
Zfp534
Pop4
Exosc9
Gm4907
Ptpn9
Zfp980
H1f0
Gcat
Lmx1b
Rfx4
Hhip
Il18rap
Sptlc2
Skor1
2610042L04Rik
Vgll1
Ndufa4l2
Rab5a
Srp19
Cast
Rag1
Ank2
Irs4
Acvr2a
Zfp382
Vkorc1l1
Drd2
Apobec2
Lhx9
Meox1
Otx1
Has2
Grik3
Pik3ap1
Pipox
Smad2
Fbxo7
Asic5
Asic1
Myb
Plcd3
Acbd4
Phlpp1
Kcnv2
Spns1
Spock3
Cog3
Zbtb11
Ints4
Fkbp5
Tctex1d1
Grap2
Arid5a
Pdha1
Neurog2
Thsd7a
Atp2c1
Sox5
Smarcal1
Smndc1
Otoa
Unc13b
Nbdy
Rraga
Zfp985
Fabp7
Nxph4
Gpr1
Clasp2
Zfp385b
Zmat4
Usp1
Gatad1
Cep112
Por
Lsm1
Bag4
Ttc34
Lrrc30
Lrpap1
Errfi1
Gtdc1
Trio
Rnf43
Rgmb
Syt2
Ncoa3
Gm10406
Pgrmc2
Phyh
Myl12b
Tmem273
Pcnx
Zc3h4
Drg1
Trhde
Cd36
Rex2
Dusp4
Cldn10
Tcf12
Cga
Tdg
Runx1t1
Mroh1
Rbfox2
Gipc2
Spcs3
Creb5
Lims1
Synpr
Sirt4
Mov10l1
Mlc1
Fam76b
Cep57
Lipg
Frem1
Nmnat3
Nemf
Tfeb
Zfp987
Tmem156
Selenos
Arhgef28
Ifitm2
Ccng1
Traf3ip1
Hmx1
H2-T23
Abcd3
Acpp
Ccn2
Foxb1
Mlxip
Mcur1
Wdr95
Pkmyt1
Pias1
Naa40
Cry1
Slc25a19
Sulf1
Nkx3-2
Pak2
Tex2
Rnf38
Efnb2
Nars
Gmnn
Eya1
Agtr2
H3c11
H2bc22
H2ac22
Acvr1c
Mcub
Rab5b
Sox4
Galc
Reep3
Thg1l
Gm10710
Prkcq
Ermn
Tmem125
Ovca2
Polr2m
Tcerg1
Itprid1
Pde11a
Cemip2
Gas1
Dll4
Rsph4a
Rwdd1
Anxa2
Agpat3
B4galt5
Slc19a3
Fap
Slc48a1