ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388063 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◣ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Rab38
Nfe2
Atg4c
Cars
Snx18
Mcf2
Nhsl1
Ascl1
Cldn34d
Brox
Aida
Pmfbp1
Tcstv3
Ubxn10
Pla2g2c
Sepsecs
Kcng3
Lrrc52
Rnase12
Rnase11
Zfp879
Nrp1
Pgk1
Bin2
Tnfrsf19
Nptx2
Spp2
Edar
Onecut2
Abhd6
Ptpn12
Zfp703
Kpna1
Uts2b
Sipa1l1
Hoxa1
Kdm4c
Sema5b
Irgm2
Gm4791
Nt5c2
Ina
Col6a6
Plekhh3
Cntnap1
Ccr10
Lmo3
Lmo4
Htr3a
Ntn1
Tshz2
Olfr107
Cfap36
Lrrtm4
Mid2
Mnx1
Sostdc1
Mpp4
Atp2b2
Ccr6
Ebf3
Nrf1
Bambi
Zfp516
Cdk19
Xylt2
Arid4a
Tshr
St3gal1
Olfr806
Krt8
Cdh12
Sem1
Unc5c
Bsx
Srek1ip1
Cwc27
Oasl1
Il31ra
Atp6v0a1
Gas2
Fancf
Rasl11a
Snca
Lrmp
Cd59a
Zcrb1
Pphln1
Onecut3
Nutm1
Nop10
Enox1
Bcas2
Sema6d
Gm15319
Dpf2
Rtn1
Pakap
Rbm27
Ccdc107
Akap17b
Nnt
4930503B20Rik
Phactr3
Asmt
Cep350
Lmo1
Ypel1
Neil1
Hoxc10
Qrfpr
Timm9
2700049A03Rik
Taf1d
4931406C07Rik
L3hypdh
Jkamp
Lef1
Chst7
Cbx5
Sfi1
Slc17a8
Aadacl2fm1
Slc7a7
1600014C23Rik
Cpne3
Taar9
Rnf43
Tspan15
Sash1
Raet1d
Serac1
Gtf2h5
Dock10
Cybb
Olfr846
Grpel1
Peli3
4921524J17Rik
Arhgap36
Copz1
Arxes2
Cyth3
Ttc32
Shroom4
Tmco5
Mroh1
Phc1
Lats2
Ndufaf4
Esr1
Pcdh1
Vmn2r102
Psmc6
Gm4861
Tmeff1
Neurod1
Fam43a
AI429214
Id3
Olfr108
Tm4sf4
Ctbp2
Sulf2
Pla2g2d
Chmp1b
Ccpg1os
Ccpg1
Kdm2b
Abi2
Sall4
Gpr139
Emb
Ebf2
Tbc1d23
Gapvd1
Sspn
Vnn1
Ubqln4
Lamtor2
Aff1
Lama2
Pgpep1l
Cacng1
Mup4
Hopx
Homer2
Hadh
Hmga1b
Hmga1
Pxn
Kcnh8
Eml1
Gnat2
Alkbh5
Hacd4
Laptm4b
Ilvbl
Celf4
Angpt2
Ldlr
Myl12a
Pdlim3
Snap25
Fezf2
Rbm47
Hesx1
Zfp608
Cenpv
Kcnn2
Stk33
Zeb2
Tnip3
Morf4l1b
Sh3glb2
Miga2
Esrrb
Btla
Hmgxb4
Fam13b
Spx
Ddx19b
Wdcp
Abca4
Arid1b
Gm21119
Mobp
Pfkp
Gja1
Vmn2r24
Vax1
Sytl2
Kctd9
Cdca2
Zkscan1
Dnajb8
Thrb
C8b
Prkab1
Creb3l1
Vtcn1
Cdh20
Zbtb18
Pdia5
Vmn2r82
Muc15
Acadl
Baz1a
Arid3b
Trex1
Shisa5
Fam171b
Taf12
Rab3gap1
Gnai3
Gcgr
Fap
Apbb2
Csf2ra
Ackr1
Baz2b
Tyr
Sec61g
Gm5820
4930467E23Rik
Ndst1
Slc6a5
Raet1e
Raet1c
Raet1b
Lipm
Sptlc2
Lims1
Tsc22d1
Lrrn2
Filip1
Angpt1
Mia3
Smco4
Slc25a40
Dbf4
Zfp985
Olfr1282
Olfr1286
Knl1
Myo1e
Pag1
Gm12253
Dchs2
Akr1b3
Gm10710
Tjp2
Fzd5
Mical3
Pcdh12
Dennd4a
Ror1
Etl4
Ptprk
Daam1
Frmd4a
Foxp1
Mamdc2
Acat3
Vgll1
Hapln1
Rps10
Kcnt2
Pkdcc
Fgfr2
Lig3
AB124611
Thsd7a
Zfp715
Tagln3
Dpp10
Cdk14
Primpol
Casp3
Coro2a
Cdh23
Zfp663
Nfe2l3
Atg7
Slc35f3
Insyn2b
Gcn1
Erich3
Fgf13
Smu1
Hacd3
Anxa2
Pgrmc2
Sart3
Iscu
Rps19
Cry1
Myt1l
Tmem30c
Fam102b
Lsm14a
Sctr
Arap1
Tnks2
Fbxw2
F2rl1
Mylk
Acbd5
Rgs8
C2cd5
Grik3
Nol4
Fgd4
Cacnb2
Grm4
Tmem178b
2510009E07Rik
Tcf7l1
Slc25a25
Ifna13
Irs4
Rbm8a
Pdlim1
Colec12
Trub1
Slc10a1
Bms1
Cep112
Pkmyt1
Dpf3
Gm14325
Cfap54
Eif2d
Cnpy1
a
Fbxo32
Arhgef18
Olfr812
Prkcq
Fzd8
Rab27a
Slc10a4
Tamm41
Nt5e
Pde4b
Plcd3
Acbd4
Slc10a6
Zfp763
Chd7
Reep3
Arhgef26
Lix1
Csta3
Pmaip1
Zcchc24
Ext1
Cldn3
Cyp2c69
Il6st
Slc4a2
Cdk5
Fndc3b
Hmcn1
Dusp4
Tmcc2
Pcbp4
Abhd14b
Usp25
Ifnb1
Sms
Inip
Olfr62
Arap2
4930474N05Rik
Armc3
Otud3
Tbc1d12
Mrps25
Cog3
Radil
Rps24
Polr3a
Actn4
Mpzl1
Lrrc36
Kctd19
Zfp3
Gm6557
Ank2
Spaca7
Tbpl1
Tent5a
Cibar2
Impdh2
Cyp7a1
Kcnk2
Slc25a19
Tmod1
Cldn34c4
Nfatc4
Ptprz1
Pxylp1
Fam241a
Pipox
Rragd
Kifc1
Myef2
Cyyr1
Caly
Qser1
Plagl1
Dipk1c
Vmn2r2
Serpinb2
Skil
Mrgprd
Rgl1
Arpc5
Veph1
Nefm
Selenos
Prkaa1
Rxrg
Tle1
Rcor3
Sulf1
Rorb
Zfp984
Mcur1
Kmt5c
Hadhb
Hadha
St6gal1
Cga
Abcd3
Sgo2a
Erdr1
Pde11a
Grem2
Zfp97
H3c10
H2bc14
H2bc13
H2ac13
Rita1
Ddx54
Lipg
Eef1akmt1
Mark1
Plekhm1
Thra
Myo10
Bdnf
Rnase4
Ang
Gja5
Morc1
Olfr492
Gdf5
Enc1
Kat2a
Hspb9
Olfr1046
Znrf4
Wee2
Zbtb8a
Dennd11
Ttll3
Kifc3
Lrrc4c
Arhgef33
Olfml1
Ntn4
Crybg3
Ppia
Dusp23
Gm5165
Gm51425
Oser1
Arhgap33
Fgf1
Aen
Cyp2j12
Trp53bp1
Raph1
Gm14410
Phc2
Cilp
Prkar2b
Ubiad1
Mtor
Gabrg2
Foxd3
Galr3
Dll1
Atp5g2
Ankrd36
Olfr60
Zfp960
Myo1b
Gm7244
Nfkbil1
Atp6v1g2
Pde7b
Prkab2
Bhlhe22
Gpm6b
Xrcc6
Desi1
Zfhx4
Zfp217
Slc25a35
Rangrf
Cipc
Ankrd50
Plekha1
Trim2
Zdhhc16
Exosc1
D7Ertd443e
Lima1
Epn2
Ust
Asf1b
Zfp931
Nr6a1
Dct
Saxo2
Efl1
Ssu72
Gm8165
Atp8a1
Kdm3b
Fbxo31
Psap
Abracl
Taar7b
Apbb1
Mest
Efna5
Ppp1r17
Adtrp
Mrap
Adar
Zfp869
Fech
Rce1
Zfp260
Myt1
Chrna4
Sec24b
Myh3
Gm6710
Gm14391
Cdh24
Kcnh2
Klf6
Ppp3ca
Sv2a
Msi1
Pax6
Tbr1
Aqr
Zfp707
Col11a1
Nup93
Fbln1
Scml4
Ank3
Tmem107
Atp8b4
Nim1k
Prpf40a
Arl6ip6
Mro
Cdca7
Otol1
Zfp91
Lpxn
Usp44
Mrps33
Kcnj16
Skap1
Slc39a10
Erg
Tcf15
Kdm1a
Zfp991
Cul2
Cacna1c
Ttc30a2
Ptpro
Mad1l1
Pop5
Bcas1
Optn
Mfng
Tle3
Ccnq
Gramd1b
Uqcc3
Lbhd1
Gm38396
Ogn
Gm14326
Chmp6
Lingo3
Gm29797
2210418O10Rik
Arhgap28
Pcbd2
Lama1
Riok3
Arhgef2
Cfap43
Cotl1
Gm17026
Toporsl
Vmn2r5
Prtg
Dip2b
Klhl29
Irx5
Piwil1
Arid1a
Bnc2
Cbx1
Trafd1
Zfyve26
Rad51b
Cyth1
Nrep
Gspt1
Lpar6
Gnai1
Mbtps2
Rln3
Il27ra
Usp15
Tenm2
Kitl
Nr4a2
Sh2d4a
Rabepk
Mrvi1
Lhx5
Erbb4
Synpo
Ehmt2
Gm17124
Mgat4a
Jmjd1c
BC048507
Ubr5
Smug1
Lgals12
Ppp3r1
Dnaic2
Tti2
Foxa2
Mical2
Fgf15
Pitpnm1
Mrpl22
Gemin5
Mbp
Eif4e1b
Gm11837
Ranbp9
Gm14296
Armh4
Lrig3
Gm3173
Gm9508
Atp1a1
Nt5c3b
Klhl10
Neurod4
Scg2
Micu2
Fam222b
Barhl1
Irx4
Ucma
Ppfia4
Cyp2b10
Negr1
Wdr17
Ttc30b
Megf9
Snw1
Stk32a
Ubap1l
Mrpl45
Wbp2nl
Tbc1d9
Upf3a
Add1
Slc9a9
Lrp2bp
Atxn7l1
Iapp
Zfp423
Iqschfp
Iqcj
Mrps28
Myl1
Gng3
Bscl2
Rexo1
Spidr
Dstn
Sacs
Map7
Cd200
Ptms
Gpr137
Bad
Inpp4b
Slc16a7
Krt222
Zfp473
Vrk3
Ankrd6
Npffr2
Bcar3
Ush2a
Cdc42ep3
Crx
Taar6
Ppp1r2
Jagn1
Amacr
Xrcc5
Zbtb2
Txndc2
Vmn2r4
Tmem202
Wwox
Ptpn14
Olfr1532-ps1
Tra2a
Lefty2
Zfp462
Pclo
Otx2
Scd3
Lag3
Ppp2r2b
Accsl
Gm3752
Mageh1
Ablim1
Commd4
Gnas
Smad5
Zfp979
Rnase9
Ddx6
Gm6712
Zc3h12c
Chpt1
Rdm1
Sohlh2
Cldn14
Ppp6r3
Lrrc10b
Osgin2
Prph
B3galt5
Asb4
Ncoa4
Elmo2
Sdk2
Ccdc171
Tac4
Trim24
Tmc5
Olfr1240
Col3a1
Elavl2
Chn1
Sox2
Alk
Pex5l
Acaa2
Vangl2
Lingo2
Gm3739
Acp6
Tcaf1
Jup
Fzd10
Arid5b
Atxn1
A1bg
Rps12
Col12a1
Zic3
Gm1113
Gm3696
Gpr141
Cep120
Xkr5
Bcor
Zmym2
Tmem30a
Acyp1
Tcl1b3
Tyro3
Ttc23
Lrrc28
Optc
Pgm5
Alpk3
Rdh11
Gfra3
Tmem37
Shroom3
Otud1
Hey2
Stk38
Abr
Epb41l3
Prps1
Zfp534
Pop4
Exosc9
Gm4907
Ptpn9
Zfp980
H1f0
Gcat
Lmx1b
Rfx4
Th
Fam110b
Hhip
Il18rap
Skor1
2610042L04Rik
Ndufa4l2
Rab5a
Srp19
Cast
Rag1
Acvr2a
Zfp382
Vkorc1l1
Drd2
Apobec2
Lhx9
Meox1
Otx1
Has2
Pik3ap1
Smad2
Fbxo7
Gm2956
Asic5
Asic1
Myb
Phlpp1
Kcnv2
Spns1
Spock3
Zbtb11
Ints4
Fkbp5
Tctex1d1
Grap2
Arid5a
Pdha1
Neurog2
Atp2c1
Sh2d7
Sox5
Smarcal1
Smndc1
Otoa
Unc13b
Nbdy
Rraga
Zfpm1
Plekhg2
Fabp7
Atp6v1e2
Nxph4
Hspa8
Gpr1
Clasp2
Zfp385b
Cacng4
Zmat4
Usp1
Gatad1
Por
Lsm1
Bag4
Ttc34
Lrrc30
Lrpap1
Errfi1
Gtdc1
Trio
Rgmb
Syt2
Ncoa3
Gm10406
Phyh
Myl12b
Tmem273
Pcnx
Zc3h4
Drg1
Trhde
Cd36
Rex2
Cldn10
Tcf12
Tdg
Runx1t1
Rbfox2
Gipc2
Spcs3
Creb5
Crppa
Synpr
Sirt4
Mov10l1
Mlc1
Fam76b
Cep57
Frem1
Nmnat3
Nemf
Cd300lg
Tfeb
Zfp987
Tmem156
Arhgef28
Ifitm2
Ccng1
Traf3ip1
Hmx1
H2-T23
Acpp
Ccn2
Foxb1
Mlxip
Tmem74
Wdr95
Pias1
Ccdc88c
Naa40
Nkx3-2
Pak2
Tex2