ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388064 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◣ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Nfe2
Rab38
Cars
Snx18
Pgk1
Atg4c
Zfp879
Ubxn10
Pla2g2c
Tcstv3
Mcf2
Cldn34d
Ascl1
Brox
Aida
Tnfrsf19
Pmfbp1
Spp2
Lrrc52
Nptx2
Rnase12
Rnase11
Bin2
Cfap36
Kcng3
Sema5b
Sipa1l1
Nhsl1
Atp2b2
Nrp1
Sepsecs
Lmo4
Kdm4c
Gas2
Fancf
Onecut2
Zfp703
Xylt2
Ptpn12
Zfp516
Col6a6
Kpna1
Hoxa1
Nt5c2
Ina
Edar
Cd59a
Lmo3
Ccr6
Uts2b
Mid2
Unc5c
Plekhh3
Cntnap1
Ccr10
Bambi
Cdh12
Abhd6
Tshz2
Mpp4
St3gal1
Peli3
Olfr107
Cdk19
Mnx1
Nnt
Ebf3
Ntn1
Tshr
Slc17a8
Nutm1
Nop10
Onecut3
Ypel1
Krt8
Neil1
Sema6d
Chmp1b
Gm4791
4930503B20Rik
Sem1
Chst7
Rasl11a
Lrmp
Neurod1
Nrf1
Lrrtm4
Hoxc10
Dock10
Snca
Htr3a
Olfr806
Il31ra
Sostdc1
Tspan15
Copz1
1600014C23Rik
Lmo1
Akap17b
Prkab1
Bsx
Irgm2
Pakap
Dpf2
Ndufaf4
Foxa2
Frmd4a
Zfp608
Gpr139
Raet1d
Oasl1
Cdh23
Bcas2
Sytl2
Gm15319
Srek1ip1
Aff1
Pla2g2d
Rab3gap1
Serac1
Gtf2h5
Ccdc107
Olfr846
Arxes2
Rtn1
Homer2
Raet1e
Raet1c
Raet1b
Sspn
Vmn2r82
Rbm27
Etl4
Cyth3
Psmc6
Vtcn1
Asmt
Taf1d
4931406C07Rik
Phactr3
Pcdh1
Hacd4
Wdcp
Ebf2
Ccpg1os
Ccpg1
Grpel1
Cbx5
Hopx
Olfr108
Kcnn2
Angpt2
Lrrn2
Ctbp2
Abi2
Aadacl2fm1
Gm21119
Cog3
Zcrb1
Pphln1
Morf4l1b
Olfr62
L3hypdh
Jkamp
Mia3
Gm5820
Taar9
Tbc1d23
Fam43a
Hesx1
Cep350
Ttc32
Shroom4
Mup4
Cpne3
Zeb2
Esr1
4921524J17Rik
Acbd5
Tm4sf4
Mamdc2
Apbb2
Fam171b
Pgrmc2
Angpt1
Kcnh8
Tmeff1
Lef1
AI429214
Cybb
Laptm4b
Usp25
Sulf2
Kctd9
Cdca2
Sall4
Nr4a2
Lmx1b
Emb
Thrb
Sash1
Arid1b
Foxp1
4930467E23Rik
Stk33
Muc15
Enox1
Cdh24
Cacng1
Arid4a
Myl12a
Alkbh5
Cfap54
Timm9
2700049A03Rik
Ddx19b
Abca4
Ror1
Vmn2r102
Psap
Kdm2b
Slc10a4
Daam1
Ilvbl
Rbm47
Mobp
Slc6a5
Gm11437
Dennd4a
Tnks2
Ubqln4
Lamtor2
Spaca7
Rcor3
Qrfpr
Slc7a7
Csf2ra
Coro2a
Tagln3
Kifc3
Lats2
Lama2
Rpf1
Esrrb
Arhgef18
Gnat2
Gm12253
Hacd3
Rnf43
Spx
Creb3l1
Tmco5
Eef1akmt1
Mroh1
Hmga1b
Hmga1
Pxn
2510009E07Rik
Vmn2r24
Vmn2r2
Grm4
Slc10a1
Itgb2
Ndst1
Tjp2
Abracl
Gnai3
Fgd4
Myo1e
Raph1
Fgfr2
Hadh
Rfx4
Pgpep1l
Baz2b
Atp6v0a1
Fzd8
Tmem47
Oit1
Zfp985
Grik3
Gm4861
Phc2
Baz1a
Sec61g
Anxa2
Zkscan1
Phc1
Slc25a35
Rangrf
Id3
Fkbp5
Fndc3b
Nol4
Sh3glb2
Miga2
Ifna13
Ppia
Tmcc2
Ccdc171
Cenpv
B4galt5
Eml1
Ldlr
Rragd
Lix1
Olfml1
Ext1
Smco4
Atg7
Gcgr
Tyr
Sptlc2
Dipk1c
Nfe2l3
Ubr5
Klhl29
Bnc2
Colec12
Lims1
Hapln1
Filip1
Pkdcc
Slc25a40
Dbf4
F2rl1
Ank2
Neurog2
Pag1
Lrrc4c
Cldn3
Mylk
Gapvd1
Pdlim3
Celf4
Stk32a
Gcn1
Olfr1286
Kat2a
Hspb9
Tmem30c
Taf12
Rps19
Tbpl1
Tamm41
Slc20a1
Tmem107
Lipm
Trub1
Mbnl1
Cyyr1
Knl1
Acadl
Arid3b
Pclo
Zfp980
Arhgap36
Arap1
Asf1b
Ptpro
Lsm1
Bag4
Zcchc24
Fezf2
Zfp3
Atp5g2
Cemip2
Rab27a
Zfhx4
Tcf7
Vmn2r5
Ppp6r3
Zfp451
Adat1
Dnajb8
Gabrg2
Erich3
Prmt2
Myt1l
Ranbp9
Gpr137
Bad
Zfp534
Btla
Cdh20
Optn
Tent5a
Sfi1
Gja1
Sgo2a
Tmem209
Ssmem1
Pdia5
Hmgxb4
Cep112
Enc1
Gm14325
Fbxo32
Insyn2b
Lpar6
Skil
Myo10
Lsm14a
Kcnk2
Fap
Arhgef26
Pak3
Gja5
Gdf5
Ankrd36
Pcdh12
Efna5
Mbp
Zfp984
Fam13b
Snap25
Mthfd2
Col3a1
Shroom3
Gcfc2
Ubiad1
Mtor
Tnip3
Taar6
Ifnb1
Ptprz1
Galr3
Olfr60
Lig3
Mbtps2
Agtr2
Kcnt2
Porcn
Rnase4
Ang
Tbr1
Kcnj16
Aebp2
Zbtb11
Sox5
Churc1
a
Prkaa1
Add1
Prkcq
Zfp641
Zbtb8a
Tmem178b
Cbx1
Adtrp
Fzd5
Hey2
Zfp217
Cyp7a1
Snw1
Zbtb18
Dpp10
Stk38
Chd7
Zfp931
Cldn14
Caly
D1Pas1
Dusp23
Mest
Rps10
Ptpn9
Prtg
Zfp91
Lpxn
Slc39a10
Txlng
Vax1
Irx5
Actn4
Pias1
Zfp991
Zranb1
Sms
Lgals12
Zfp473
Vrk3
Lgr5
Trex1
Shisa5
Otx2
Olfr1046
Ccng1
Cnpy1
Zfp988
Nol4l
Gm4981
Lipg
Zfp715
Rorb
Armc3
Pkmyt1
Sult6b2
Col11a1
Mrps25
Lrrc57
Haus2
Mrpl48
Ddx6
Tsc22d1
Thsd7a
Arsi
Snrpc
AB124611
Pou5f1
Usp1
Fbxw2
Trafd1
Csta3
Erdr1
Pop5
Ccdc90b
Myo1b
Atxn1
Rdm1
Bmp5
Cibar2
Peli2
Hexim1
Urgcp
Acp6
Tuba1b
Morc1
Olfr492
Znrf4
Wee2
Dennd11
Ttll3
Arhgef33
Ntn4
Crybg3
Gm5165
Gm51425
Oser1
Arhgap33
Fgf1
Rgs8
Aen
Cyp2j12
Trp53bp1
Gm14410
Cilp
Prkar2b
Olfr1282
Foxd3
Myef2
Dll1
Pdlim1
Zfp960
Sctr
Gm7244
Nfkbil1
Atp6v1g2
Pde7b
Prkab2
Bhlhe22
Gpm6b
Xrcc6
Desi1
Pxylp1
Cipc
Ankrd50
Plekha1
Trim2
Zdhhc16
Exosc1
D7Ertd443e
Lima1
Epn2
Ust
Ackr1
Nr6a1
Dct
Saxo2
Efl1
Ssu72
Plekhm1
Gm8165
Zfp663
Atp8a1
Kdm3b
Fbxo31
Taar7b
Vnn1
Apbb1
Dchs2
Bdnf
Nfatc4
Ppp1r17
Mrap
Adar
Zfp869
Fech
Rce1
Zfp260
Myt1
Chrna4
Sec24b
Myh3
Gm6710
Gm14391
Kcnh2
Klf6
Ppp3ca
Sv2a
Msi1
Akr1b3
Pax6
Aqr
Serpinb2
Zfp707
Nup93
Fbln1
Scml4
Ank3
Tcf7l1
Atp8b4
Nim1k
Slc25a25
Prpf40a
Arl6ip6
Mro
Cdca7
Otol1
Usp44
Mrps33
Skap1
Erg
Tcf15
Kdm1a
Slc35f3
Cul2
Cacna1c
Ttc30a2
Mad1l1
Bcas1
Mfng
Rxrg
Nt5e
Tle3
Ccnq
Gramd1b
Uqcc3
Lbhd1
Gm38396
Ogn
Gm14326
Chmp6
Zfp97
Lingo3
Gm29797
2210418O10Rik
Arhgap28
Pcbd2
Lama1
Riok3
Arhgef2
C2cd5
Cfap43
Cotl1
Gm17026
Toporsl
Dip2b
Piwil1
Arid1a
Zfyve26
Rad51b
Cyth1
Nrep
Gspt1
Gnai1
Inip
Rln3
Il27ra
Usp15
Tenm2
Kitl
Sh2d4a
Rabepk
Mpzl1
Mrvi1
Lhx5
Erbb4
Synpo
Ehmt2
Gm17124
Mgat4a
Jmjd1c
BC048507
Impdh2
Smug1
Ppp3r1
Dnaic2
Mical3
Tti2
Mical2
Fgf15
Pitpnm1
Mrpl22
Gemin5
Eif4e1b
Gm11837
Gm14296
Armh4
Lrig3
Gm3173
Gm9508
Atp1a1
Nt5c3b
Klhl10
Neurod4
Scg2
Micu2
Fam222b
Barhl1
Irx4
Ucma
Ppfia4
Cyp2b10
Negr1
Wdr17
Ttc30b
Megf9
Ubap1l
Mrpl45
Wbp2nl
Tbc1d9
Upf3a
Slc9a9
Lrp2bp
Atxn7l1
Iapp
Zfp423
Iqschfp
Iqcj
Mrps28
Myl1
Pcbp4
Abhd14b
Gng3
Bscl2
Rexo1
Spidr
Hmcn1
Dstn
Sacs
Map7
Cd200
Ptms
Inpp4b
Slc16a7
Krt222
Ankrd6
Npffr2
Bcar3
Eif2d
Ush2a
Cdc42ep3
Arap2
Crx
Ppp1r2
Jagn1
Amacr
Xrcc5
Zbtb2
Txndc2
Vmn2r4
Tmem202
Wwox
Ptpn14
Olfr1532-ps1
Tra2a
Lefty2
Zfp462
4930474N05Rik
Pde4b
Scd3
Lag3
Ppp2r2b
Accsl
Gm3752
Mageh1
Ablim1
Commd4
Gnas
Smad5
Zfp979
Rnase9
Gm6712
Zc3h12c
Chpt1
Sohlh2
Lrrc10b
Osgin2
Prph
B3galt5
Asb4
Radil
Acat3
Ncoa4
Elmo2
Sdk2
Tac4
Trim24
Tmc5
Olfr1240
Elavl2
Chn1
Sox2
Alk
Pex5l
Acaa2
St6gal1
Vangl2
Lingo2
Gm3739
Tcaf1
Jup
Fzd10
Arid5b
A1bg
Rps12
Col12a1
Zic3
Gm1113
Gm3696
Gpr141
Kifc1
Cep120
Xkr5
Bcor
Zmym2
Tmem30a
Acyp1
Tcl1b3
Tyro3
Ttc23
Lrrc28
Optc
Pgm5
Alpk3
Rdh11
Gfra3
Tmem37
Otud1
Abr
Bms1
Epb41l3
Prps1
Pop4
Exosc9
Gm4907
H1f0
Gcat
Th
Fam110b
Hhip
Il18rap
Skor1
2610042L04Rik
Vgll1
Ndufa4l2
Rab5a
Srp19
Cast
Rag1
Irs4
Acvr2a
Zfp382
Vkorc1l1
Drd2
Apobec2
Lhx9
Meox1
Otx1
Has2
Pik3ap1
Pipox
Smad2
Fbxo7
Gm2956
Asic5
Asic1
Myb
Plcd3
Acbd4
Phlpp1
Kcnv2
Spns1
Spock3
Ints4
Tctex1d1
Grap2
Arid5a
Pdha1
Atp2c1
Sh2d7
Smarcal1
Smndc1
Otoa
Unc13b
Nbdy
Rraga
Zfpm1
Plekhg2
Fabp7
Atp6v1e2
Nxph4
Hspa8
Gpr1
Clasp2
Zfp385b
Cacng4
Zmat4
Gatad1
Por
Ttc34
Lrrc30
Lrpap1
Errfi1
Gtdc1
Trio
Rgmb
Syt2
Ncoa3
Gm10406
Phyh
Myl12b
Tmem273
Pcnx
Zc3h4
Drg1
Trhde
Cd36
Rex2
Dusp4
Cldn10
Tcf12
Cga
Tdg
Runx1t1
Rbfox2
Gipc2
Spcs3
Creb5
Crppa
Synpr
Sirt4
Mov10l1
Mlc1
Fam76b
Cep57
Frem1
Nmnat3
Nemf
Cd300lg
Tfeb
Zfp987
Tmem156
Selenos
Arhgef28
Ifitm2
Traf3ip1
Hmx1
H2-T23
Abcd3
Acpp
Ccn2
Foxb1
Mlxip
Mcur1
Tmem74
Wdr95
Ccdc88c
Naa40
Cry1
Slc25a19
Sulf1
Nkx3-2
Pak2
Tex2
Rnf38
Efnb2
Nars
Gmnn
Eya1
H3c11
H2bc22
H2ac22
Acvr1c
Mcub
Rab5b
Sox4
Galc