ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2388067 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◣ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Snx18
Nhsl1
Cars
Nfe2
Sipa1l1
Atg4c
Zfp879
Rab38
Ubxn10
Pla2g2c
Mcf2
Pakap
Nnt
Gm4791
Kcng3
Gas2
Fancf
Sepsecs
Lmo3
Nt5c2
Ina
Akap17b
Ascl1
Frmd4a
Neurod1
Nrp1
Spp2
Bin2
Mid2
Pgk1
Lrrc52
Sema5b
Brox
Aida
Esrrb
Kdm4c
Cldn34d
Pmfbp1
Hoxc10
Nptx2
Gja5
Sema6d
Bambi
Lrmp
Sulf2
Nrf1
Krt8
Ntn1
Zfp608
Lmo1
Plekhh3
Cntnap1
Ccr10
Tmem30c
Mpp4
Cdk19
Lmo4
Sytl2
Col6a6
Zfp516
Tmco5
Psmc6
Onecut2
Irgm2
Ypel1
Gnat2
Ttc32
1600014C23Rik
Hoxa1
Uts2b
Mnx1
Slc17a8
Phc1
Rbm27
Coro2a
Htr3a
Gm8165
Bsx
Nutm1
Nop10
Rasl11a
Sash1
Prkab1
Rnase12
Rnase11
Cybb
Xylt2
Tnfrsf19
Enox1
Snca
Eml1
Tmeff1
Sostdc1
Cfap36
Olfr492
Tcstv3
Lef1
Cdh12
Neil1
Cbx5
Ccdc107
Enc1
Zcrb1
Pphln1
Copz1
Kcnn2
Pgpep1l
Zkscan1
Dock10
Unc5c
Edar
Tagln3
Fezf2
Tjp2
Taf1d
4931406C07Rik
Lsm14a
Olfr1046
Ccr6
Qrfpr
Dipk1c
Dennd11
Onecut3
Lrrtm4
Rtn1
Angpt1
Usp25
Alkbh5
Hmga1b
Hmga1
Arhgef33
Atp2b2
Fam43a
Hmgxb4
Ccpg1os
Ccpg1
Kpna1
Wee2
Atp6v0a1
Prkar2b
Pcdh1
Gm17124
St3gal1
Morf4l1b
Zeb2
Morc1
Rbm47
Ndst1
Raet1d
Pkdcc
Timm9
2700049A03Rik
Oser1
Zbtb8a
Slc25a35
Rangrf
Sh3glb2
Miga2
Zfp90
Abracl
Abhd6
Vmn2r24
Acbd5
Ubqln4
Lamtor2
Kifc3
Grpel1
Myef2
Gdf5
Gm4861
Kcnh8
Daam1
Gm17026
Slc25a40
Dbf4
Knl1
Mia3
Kat2a
Hspb9
4921524J17Rik
Raet1e
Raet1c
Raet1b
Peli3
Dennd4a
Kctd9
Cdca2
Taf12
Ttll3
Ptpn12
Wdcp
Sec24b
Tspan15
Myt1l
Shroom4
Smco4
Arhgap36
Olfr1286
Trp53bp1
AI429214
Rab27a
Nfe2l3
Hadh
Celf4
Ifnb1
Chst7
Dll1
Mup4
Vmn2r82
Ddx19b
Olfr846
Mamdc2
Rps19
Gm5165
Ctbp2
Il31ra
Trub1
Eef1akmt1
Adar
Pdlim1
Raph1
Foxd3
Cldn3
Acadl
Zfp91
Lpxn
Cyp2j12
Slc6a5
Crybg3
L3hypdh
Jkamp
Phc2
Otol1
Myo1b
Lima1
Cdh24
Serpinb2
Sms
Zfp3
Ebf3
Fam171b
Stk33
Ebf2
Ror1
Hapln1
Pdlim3
Pla2g2d
Mro
Znrf4
Gm14325
Arxes2
Lats2
Slc10a1
Ackr1
Lipm
Gm14410
Dpf2
Hacd4
Atp5g2
Pxylp1
2510009E07Rik
Prpf40a
Arl6ip6
Hacd3
Zfp217
Irx5
Tamm41
Sem1
Fgfr2
Rgs8
Tnks2
Kcnh2
Ptprz1
Tbpl1
Atp8a1
Cilp
Kdm3b
Asf1b
4930503B20Rik
Gpr139
Serac1
Gtf2h5
Tmem178b
Bcas2
Chd7
Tshz2
Ntn4
Galr3
Myo1e
Lig3
Xkr5
Zfp931
Zfp715
Trex1
Shisa5
Zdhhc16
Exosc1
Plekhm1
Lix1
Nfkbil1
Atp6v1g2
F2rl1
Eif4e1b
Erbb4
Gpm6b
Asb4
Irs4
Ndufaf4
Angpt2
Cyth1
Cemip2
Lrrn2
Pxn
Etl4
Lrrc4c
Cnpy1
Lims1
Aen
Olfr806
Cbx1
Abca4
Plekha1
Cyth3
Pcdh12
Cdh23
Ext1
Epn2
Cyyr1
Gpr1
Srek1ip1
Hesx1
Tbr1
Wbp2nl
Ppia
Fgf1
Vnn1
Ankrd36
Cd36
Zfp960
Cenpv
Mbtps2
Fam13b
Apbb2
Saxo2
Efl1
Gm5820
Cul2
Aff1
Thrb
Dusp23
Adtrp
Nacc2
Pde7b
Sall4
Apbb1
Gm38396
Cldn14
Ubiad1
Mtor
Nol4
Rnase4
Ang
Cdh20
Mrpl22
Gemin5
Rab5a
Msi1
Arhgef18
Nr6a1
Olfr62
Rexo1
Gm51425
Bcas1
Gpr141
Bdnf
Tmc5
Ldlr
Mrps25
Sctr
Arhgap33
Chrna4
Kcnj16
Myl12a
Sptlc2
Myl12b
Tbc1d23
Btla
Pop5
Creb3l1
Chmp6
Aqr
Htr1d
Oasl1
Emb
Negr1
Grm4
Kdm2b
Lama2
Akr1b3
Ptpn9
Fgd4
Rce1
Sacs
Gm11837
Hhip
Lsm1
Bag4
Slc7a7
2210418O10Rik
Gm14296
Tyr
A1bg
Synpr
Rtraf
Batf
Acaa2
Rragd
Epb41l3
Chmp1b
Cacna1c
Dnajb8
Piwil1
Prkaa1
Ehmt2
Abi2
Nr4a2
Barhl1
Rcor3
Pgm5
Bhlhe22
Gm14326
Lingo3
Ppp1r17
Filip1
Baz2b
Cotl1
Nfatc4
Gabrg2
Pde4b
Pipox
Otud1
Tshr
Arhgef2
Tyro3
Fkbp5
St6gal1
Accsl
a
Fzd5
Cipc
Arap1
Gm29797
Zmym2
Jmjd1c
Zbtb18
Ttc23
Lrrc28
Larp4
Spx
Smu1
Actn4
Rhpn2
Arid4a
Tcf7l1
Impdh2
Fbxo31
Mad1l1
Gnai1
Homer2
Rps10
Errfi1
Qser1
Mark4
Exoc3l2
Lrig3
Ttll8
Gpr137
Bad
Ddx6
Slc25a25
Acp6
Alpk3
Zfp664
Ccdc92
Phactr2
Cep350
Gnai3
Radil
Pak3
Usp15
Krt222
Nkx1-1
Insyn2b
Ppp2r2b
Zfyve26
Rad51b
Ssu72
Arid3b
Mrvi1
Csta3
Scd3
Gnas
Fam151a
Myh3
Tenm2
Ubr5
Spns1
Pcbp4
Abhd14b
Hes7
Aloxe3
Zfp703
Foxp1
Rgmb
Sv2a
Col11a1
Rdm1
Gtdc1
Olfr60
Ankrd50
Prph
Olfr235
Nbdy
Tcf15
Vmn2r2
Rab3gap1
Nup93
Dip2b
Unc13b
Asmt
Mfng
Slc9a9
Lefty2
Cpne3
Gng3
Bscl2
Smad2
Pcbd2
Rnf38
Taar7b
Mpzl1
Cfap54
Kitl
Arid1b
Csf2ra
Zfp451
Psap
Klf6
Slc35f3
Aadacl2fm1
Has2
Slc25a4
Tm4sf4
Tsc22d1
Rdh11
Zfp979
Nxph4
Itgb2
Lhx9
Foxd4
Gspt1
Scg2
Slc25a19
Sh2d4a
Stk38
Pdha1
D7Ertd443e
Ppp6r3
Tcf12
Pax6
Slc39a10
Grap2
Anxa2
Fbln1
Cyp2b10
Gm614
Ssr3
Xrcc6
Desi1
Zcchc24
Prtg
Nars
Spic
Tent5a
Ckap2
Rorb
Ppp3r1
Mroh1
H2-T23
Cog3
Zfp991
Ilvbl
Fgf15
Galntl6
BC030500
Rabepk
Tbc1d9
Zfp980
Gatad1
Ptprk
Olfr1282
Wnt5b
Vax1
Optn
Mansc1
Zfhx4
Mrap
Gm6710
Gm14391
Vtcn1
Kcnk2
Colec12
Prps1
Agtr2
Zfp212
Map4
Nckap5
Armh4
Trim24
Zfp97
Gm9508
Zfp984
Tctex1d1
Cd59a
Lhx5
Apobec2
Zbtb11
Gins2
Lama1
Alk
Ldb1
Cdca7
Ankrd6
Pclo
Otx2
Ncoa3
Rbm12b2
Klhl29
Fbxw2
Mical3
Rfx4
Smad5
Dchs2
Thg1l
Gm10710
Sspn
Inpp4b
Olfr1240
Il18rap
Rsph4a
Cntnap2
Kcnab1
Garnl3
Gm6557
Mest
Kdm1a
Erich3
Olfr108
Osgin2
Plcd3
Acbd4
Zc3h4
Snap25
Lgals12
Dll4
Ptpn14
Zc3h12c
Ccdc171
Arid5a
Zfp987
Hivep2
Hid1
Slc10a4
Tmem107
Rxrg
Inip
Fzd10
D1Pas1
Eif2d
Arap2
Reep3
Gpr62
Atxn7l1
Gm6712
Zmat4
Zfp182
Olfm3
Mbnl1
Id3
Spidr
Pop4
Zfp985
Abcd3
Ttc30a2
Abr
Dedd
Epg5
Fech
Cdc42ep3
Psma8
Foxa2
Serpine3
Arpp21
Zfp869
Col12a1
Sirt4
Ap3m2
Acot1
Arid1a
Zfp988
Sars
Dnah7a
Laptm4b
Tmcc2
Mrps28
Ppm1e
Ogn
Fbxo32
Ptms
Lag3
Caly
Zfp385b
Nbeal2
Ccdc12
Sez6
Dct
Meox1
Rex2
Acsm1
Otop3
Tbce
Guf1
Ppp2r1b
Tex2
Pdpr
Nfia
Baz1a
Kcnv2
Snrpc
Pla2g2e
Gm13030
Dlc1
Usp11
Skil
Exosc9
H3c10
H2bc14
H2bc13
H2ac13
Wdr17
Eya1
Mdm4
Itgb1
Arhgap28
C2cd5
Arhgap11a
Nrep
Rag1
Fbxo7
Por
Tuba1b
Maoa
Tti2
Stk32a
Agpat3
Nuak1
Plekhf2
Hexim1
Scml4
Cyp7a1
Bcor
Zranb1
Nin
Vsir
Neurod4
Ttc30b
Zbtb2
4930474N05Rik
Zfp382
Acvr1c
Efna5
Cep120
Tfeb
Arhgef28
Vpreb1
Top3b
Zfp707
Lpar6
Nemf
Runx1t1
Rexo5
Eri2
Fgf20
Spock3
Nkx3-2
Ifna13
Cibar2
Bnc2
Muc15
Tac4
Ttc34
Eif2b5
Nlrp9b
Defb10
Ipo11
Usp44
Pitpnm1
Zfp423
Iqschfp
Iqcj
Rps12
Gfra3
Pias1
Tpbg
Fat1
Sertad4
Lrp2bp
Tmem156
Mrpl45
Myb
Ifitm2
Ckap5
Ankrd52
Cast
Rcor1
Jam2
Gm973
Frem1
Schip1
Jup
Efnb2
Rnf2
Rwdd1
Pgghg
Rftn2
Tmed1
Sfi1
Npffr2
Rpl17
BC031181
Ms4a14
Lrrc57
Haus2
BC048507
Sox2
Pmaip1
Olfr107
Gramd1b
Gcn1
Bms1
Adgrg7
Gm2007
Wnt7a
Tmem242
Txlng
Mmrn1
Gabrb2
Lyrm9
Prkrip1
Fzd3
Fbxo16
Dcdc2c
Phf21a
Atp1a1
Ndufa4l2
Acpp
H3c11
H2bc22
H2ac22
Rheb
Add1
Phlpp1
Pcnx4
Pdia5
Ptgs2
Zfp944
Zfp758
Trappc6a
Bloc1s3
Raly
Commd4
AB124611
Slc4a2
Cdk5
Gja1
Clip1
Ccdc90b
Bcar3
Tafa4
Ano6
Slc16a10
Fam149a
Trim7
Ucma
Elavl2
Gm17660
Marchf9
Cdk4
Rpia
Sh3gl1
Chaf1a
Zfp473
Vrk3
Neurog2
Cd300lg
Sncaip
Spaca7
Ablim1
Phyh
Nmnat3
Traf3ip1
Fap
Gm4724
Gm2026
Gm14434
Gm14430
Gm14308
Fmc1
Lsmem2
Slco4c1
Olfr435
Prpf18
Fggy
Rpl39
Cpvl
Inhbe
Hyal2
Hyal1
Myt1
Naa40
Cltc
Mpc2
Dcaf6
Wrap53
Trp53
Dpf3
Apela
Tle3
Rln3
Il27ra
Rbfox1
Hnrnpa1
C1ql2
Nde1
Marf1
Ovol2
Fam222b
Tdg
Mat2a
Phf10
Prdx1
Ank3
Anapc15
Tmem71
Vkorc1l1
Mcub
H1f5
4930550C14Rik
Mns1
Myl1
Fam110b
Pkmyt1
Cry1
Taf5
Rbm25
Calm1
Gm21119
4930467E23Rik
Shisa9
Tesk2
Lrrc36
Cntn2
Tlr5
Atg7
Fzd8
Zic3
Vgll1
Gipc2
Psmd4
Rs1
Fgf13
Wdr63
Psd3
Kcnt2
Crybg1
Acp5
Suz12
Gm6551
Vmn2r5
Tcerg1
Txndc9
Eif5b
Acvr2a
Wnt11
Sftpd
Helt
Gja3
Zfp260
Mbp