ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706959 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◢ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◣ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Nfe2
Cars
Snx18
Kank1
Zfp879
Ubxn10
Pla2g2c
Frmd4a
Nhsl1
Gm4791
Sostdc1
Rab38
Mcf2
Edar
Sipa1l1
Nrf1
Sepsecs
Olfr492
Kcng3
Pakap
Arhgap33
Bsx
Zcrb1
Pphln1
Coro2a
Prkab1
Krt8
Pgk1
Akap17b
Hoxc10
Nptx2
Zfp516
Lmo3
Bin2
Atg4c
Zfp608
Tagln3
Tcstv3
Slc25a40
Dbf4
Ndufaf4
Lrmp
Pmfbp1
Lmo4
Taf1d
4931406C07Rik
Enc1
Wee2
Irgm2
Tm4sf4
Kdm2b
Nrp1
1600014C23Rik
Tspan15
Pgpep1l
Ntn1
Gdf5
Fgf1
Pxn
Tmeff1
Skap1
Mpp4
Sytl2
Esrrb
Psmc6
Pkdcc
Zkscan1
Cldn3
Gja5
Sash1
Rnase12
Rnase11
Lrrc52
Rasl11a
Gnat2
Slc7a7
Dnajb8
Nnt
Spp2
Hmga1b
Hmga1
Cybb
Rbm27
Fezf2
Neurod1
Id3
Grm4
Dennd11
Morc1
Pex5l
Ndst1
Laptm4b
Plekhh3
Cntnap1
Ccr10
Slc17a8
Cfap36
Myt1l
Tmco5
Ccpg1os
Ccpg1
Arhgap28
Kdm4c
Hoxa1
Rbm47
Cilp
Lrrtm4
Zbtb8a
Abca4
Phc1
Znrf4
Mylk
Tmem30c
Aqr
Gm5820
Pdlim3
Lef1
Alkbh5
Copz1
Ypel1
Sctr
Mid2
Ankrd36
Pcdh12
Sema5b
Lmo1
Grpel1
Arhgef33
Cdk19
Tnfrsf19
Peli3
Qrfpr
Btla
Trex1
Shisa5
Emb
Fam171b
Nt5e
Rgs8
AI429214
Plekha1
Nfkbil1
Atp6v1g2
Amacr
Fam43a
Kcnn2
Nt5c2
Ina
Ext1
Acbd5
Cfap54
Cdh23
Atp2b2
Foxp1
Taar9
Xrcc6
Desi1
Eml1
Gm5165
Angpt1
Zdhhc16
Exosc1
Ptpn12
Arxes2
Uts2b
Oser1
Gm14325
Col11a1
Timm9
2700049A03Rik
Lsm14a
Angpt2
Zfp715
Ddx19b
Rab27a
Gpr139
Ackr1
Cacna1c
Ptpro
Mad1l1
Usp25
Cbx5
Smarcal1
Sms
Zfp3
Lrrc4c
Sec24b
Kdm3b
Mup4
Phc2
Myef2
Gm4861
Pdlim1
Gm14410
Ror1
Mnx1
Atp6v0a1
Bdnf
Sh2d4a
Ubiad1
Mtor
Fndc3b
Lats2
Dipk1c
Sp5
4921524J17Rik
Creb3l1
Cdh12
Srp19
Npffr2
Hopx
Zfp663
Rnase4
Ang
Zfp703
Trim2
Myoz1
Raph1
Ptprz1
Dusp23
Ncoa4
Nol4
Shroom4
Cyp2j12
Atp8a1
Iapp
Sv2a
Morf4l1b
Tbr1
Fzd5
Lix1
St3gal1
Smug1
Tdrd3
Gm51425
Dpp10
Prkar2b
Hmgxb4
Aen
Ntn4
Lama1
Snw1
Galr3
Zfp960
Kat2a
Hspb9
Mia3
Bambi
Zfp931
Dennd4a
Acadl
Abcc12
Kif15
1110059G10Rik
Kctd9
Cdca2
Myo1b
Zfp260
Knl1
Col6a6
Ttc32
Optn
Lingo3
Gas2
Fancf
Ankrd50
Atp5g2
Kifc3
Adar
Mest
Ogn
Chmp6
Cdh20
Jup
Ptpn14
Trhde
Col3a1
Ppp3ca
Crybg3
Zeb2
Gm9508
Ppia
Mpzl1
Etl4
Barhl1
Olfr107
Cldn34d
Hadh
Chrna4
Arhgef18
Cipc
Bcas2
Pax6
Zfp462
Taar7b
Tcf7l1
Accsl
Dock10
Tcaf1
Neil1
Mrvi1
Zic4
Uqcc3
Lbhd1
Olfr60
Agap3
Gm8165
Psap
Foxe1
Lgals12
Akr1b3
Mrps25
Tjp2
Rce1
Armh4
Slc9b2
Tbc1d23
Cul2
Arhgef2
Prkaa1
F2rl1
Slc16a7
Slc9a9
Brox
Aida
Taf12
Trp53bp1
Slc10a1
Daam1
Pipox
Msi1
Olfml1
Mgat4a
Rps19
Olfr1286
Optc
Pop5
Atp1a1
Eif2d
Otop3
Lrpap1
Dll1
Lefty2
Lrrn2
Abi2
Pde7b
Lrrc10b
Prpf40a
Arl6ip6
Lamc3
Zfp97
Lama2
Atg7
Zic3
Plekhm1
Eda
Gpm6b
Dpf2
Fgd4
Apbb2
Tctex1d1
Mamdc2
Gm4907
Trafd1
Nup93
Arid1a
Tenm2
Mfng
2510009E07Rik
4930503B20Rik
Spx
Celf2
Ucma
Lamc1
Cyth1
Mcub
Rln3
Il27ra
Chmp1b
Arhgap36
Ssu72
Zfhx4
Hacd4
Ppp1r17
Kdm1a
Gm17026
Adck1
Acaa2
Mlxip
Lpar6
Wbp2nl
Pcdh1
Inip
Galc
Ryr3
Chd7
Ldlr
Dct
Slc25a35
Rangrf
Gm6710
Gm14391
Crx
Spidr
Bcar3
Apbb1
Trub1
Lpar1
Pxylp1
Slc25a25
Gspt1
Zbtb18
Tent5a
Krt222
Rnase9
Sulf2
Tac4
Ppp3r1
Csta3
Pear1
Zfp869
Zfp217
Txndc2
Zfyve26
Rad51b
Riok3
Tmem37
Ndufa4l2
Sema6d
Raet1d
H3c11
H2bc22
H2ac22
H1f5
Tmem107
Serac1
Gtf2h5
Nfatc4
Pitpnm1
Cldn10
Rtn1
BC048507
Epn2
Bcas1
Fam222b
Zcchc24
Fgf15
Mageh1
Eef1akmt1
4930474N05Rik
Spock3
Palmd
Kcnh2
Cga
Kcnj16
Eya1
Slc19a3
Tmbim1
Ppp1r2
Vax1
Foxd3
Usp15
Lrig3
Secisbp2l
Gpbp1
Fbxo31
Cyyr1
Piwil1
Cnpy1
Slc10a4
Gnai1
Cd200
Otud1
Synpo
B3galt5
Mrpl45
Lrp2bp
Rs1
Pgm5
Tle3
2210418O10Rik
Gm14296
Rps12
Cotl1
Haao
Gm29797
Rdh11
Fbln1
Mrps33
Hspa12a
Eno4
Mbtps2
Zfp707
Rwdd1
Ilvbl
Gja1
Prkab2
Tbc1d9
Hmx1
Otx2
Gfra3
Mcur1
Klhl29
Cdh3
Bhlhe22
Tmc5
Olfr1046
Acpp
Wdcp
Nr6a1
Efna5
D7Ertd443e
Eif4e1b
Vangl2
Ankrd6
Gm38396
Vmn2r2
Scml4
Grip2
Kitl
Mro
Ubr5
Lig3
Cacnb2
Pcdhgc5
Pcdhgc4
Gm52429
Asf1b
Htr3a
Tmcc2
Ehmt2
Pcbp4
Abhd14b
Zfp473
Vrk3
Rexo1
Arap1
Zfp939
Zfp991
Ublcp1
Dnaic2
Irx4
Pitx2
Cyp7a1
Lap3
C2cd5
Hmcn1
Lgr4
Gm6712
Asic1
Celf4
Rorb
Mrpl22
Gemin5
L3hypdh
Jkamp
Arid3b
Ttc22
Klf6
Fzd10
Fbxo7
Wdr89
Gramd1b
Gm17124
Megf9
Arhgef26
Radil
Gm11837
Sh3glb2
Miga2
Tspan3
Alpk3
Ppargc1b
Ccr6
Olfr435
Sorl1
Nfkb1
Cbx1
Siah1a
Ifnb1
Nrep
Ints4
Rictor
Grap2
Phax
Aldh7a1
Rbbp7
Has2
Tex2
Cxxc5
Tnip3
Gm21119
Enox1
Myh3
Erbb4
Sec61g
1700024G13Rik
Irx5
Smco4
Cdca7
Cass4
Fam13b
Eml2
Traf3ip1
Negr1
Hoxb2
Gsc
Snca
Sox2
Krt23
Slc39a10
Gnas
Otx1
Clps
Tmem171
Hacd3
Il31ra
Scg2
Pdgfc
1700034J05Rik
Nim1k
Foxb1
Arid4a
Gm14326
Arid5b
Oacyl
Reep3
Pik3ip1
Gna14
Tmem209
Ssmem1
Gabrb2
Impdh2
Nt5c3b
Klhl10
Runx2
Ccnq
Nr0b2
Tfe3
Lima1
Triqk
Vmn2r12
Jagn1
Sall4
Glb1l2
Zfp978
Abr
Kmt2c
Usp44
Ppp2r2b
Nxph4
Fyco1
Ypel3
Tbx6
Elavl2
Fermt2
Hesx1
Ube2ql1
Ucn
Tef
Fzd8
Cdh24
Armc3
Zfp382
Sox5
Prtg
Acsm1
D630039A03Rik
Aqp3
H3c3
H3c2
H2bc3
H2ac4
Eif4e3
Sost
Epb41l3
Tnks2
Trim24
Adgrg7
Adamts10
Fbxo11
Mthfd1
Taar6
Zfp212
Cacng1
Rbfox2
Shc4
Bcor
Aff1
Ttll3
Prop1
Kcnh8
Crybb3
Gm15319
Cyp2b10
Tfeb
Prkcq
Dclk1
Tcerg1
Mrps28
Drd2
Rxrg
Sulf1
Zbtb2
Plekhf2
Rfx4
Ncoa3
Stx12
Rnf38
Gfi1
Lsmem2
Smndc1
Myt1
Rraga
Cd300lg
Smad5
Myb
Tuba1b
Agtrap
Pias1
Crybg1
Cibar2
Kpna1
Stk32a
Skor1
Slc35f3
Lingo2
Mbp
Tbx3
Slc25a4
Zfp182
Add3
Caly
Spaca7
Tma7
Ccdc51
Prps1
Cry1
Pdha1
H2al1j
Ralgds
Upf3a
Pdpr
Skil
Nkx3-1
Car9
Arhgef39
Arap2
Krt90
Dmrtb1
Lpar4
Nck2
Mical3
Gm10406
Ccdc88c
Fabp7
Ergic3
6430550D23Rik
Pdcl3
Gng3
Bscl2
Neurod4
Fam76b
Cep57
Lmo7
Bmp7
Engase
Serpinb2
Slc8b1
Plbd2
a
Spaca9
Ak8
Tbpl1
Abhd6
Vmn2r24
Ptms
Lag3
Npas1
Ism1
Zmat4
Ehbp1
Plekha7
Ccdc107
Epha1
Slc44a3
Plekhg2
Mov10l1
Mlc1
Lipg
Slc20a1
Acat3
Drg1
Gpatch1
Otol1
Gcn1
Nuak1
Nav1
Myl12a
Myl12b
Trarg1
Bhlha9
Nkx2-4
Osgin2
Kcnv2
Zc3h12c
Fnbp1
Gipc2
Xylt2
Jmjd1c
Agpat3
Chodl
Olfr806
Fech
Poglut3
Kctd15
Peli2
Pax8
Gpr25
C1ql1
Gm3173
Vnn1
Ttc30b
Colec12
Acvr2a
Zfp971
Olfr986
Gm20346
Zfp91
Lpxn
Por
Sp9
Olfr108
Gm11100
Tra2a
Tcl1b3
Gm3752
Ninj1
Cnnm2
Bcl2l1
Rsph4a
Zadh2
Tshz1
Rere
Kifc1
Arfgap2
Bloc1s1
Dact2
Ehf
Dcun1d4
CK137956
Erg
Dstn
Gse1
Txlng
Agpat5
Bnc2
Vgll1
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Ywhab
H2-T23
Polr2m
Lhx5
Phlpp1
Dusp4
Wnt5b
Zfp945
Nip7
Cog8
Add1
Selenos
Gtdc1
Sugct
Mplkip
Shroom3
Neurog2
Col4a2
Col4a1
Cypt3
Coro6
Zbtb11
Ccn6
Rbms1
Zfp995
Runx1
Unc13b
Rab5b
Gas1
Dll4
Olfr150
Tamm41
Rcor1
Syne3
Sh2d5
Pak1
4930467E23Rik
Ankrd10
Akap9
Slc37a4
Ptgr2
Plcxd1
Zfp317
Trio
Rgmb
Tbc1d5
Trappc6a
Bloc1s3
Rora
Nkain3
Greb1
Grsf1
Map7
Olfr1282
Rps10
Lhx9
Stk38
Wnt2
Tyr
Bms1
Cd59a
Erich3
Galnt5
Shld2
Glud1
Tmem178b
Tmem273
Gsx2
Stk33
Pla2g2e
Gm13030
Ppm1a
Ajap1
Slc12a6
Dync1li1
Nat8
Rhpn2
Myog
Gm14322
Tpcn2
Dhx32
Rps6ka3
Tcf15
Gm3696
Cep112
Olfr812
Scd3
Zfp979
Itprid1
Ret
Pcbd2
Ifitm2
Psd3
1110032F04Rik
Tex37
Insyn2b
Col12a1
Ppm1e
4930550C14Rik
Chst7
Nbeal2
Ccdc12
Trappc4
Rps25
Mettl9
Tshz2
Lipm
Zfpm1
Armc12
Wdr63
Tle1
Krt25
Unc5b
Tex36
Raet1e
Raet1c
Raet1b
Zfp985
Lct
Fbxo28
Atp2c1
Rnft1
Leng8
Ccn2
Ovca2
Dusp5
Zfp534
Pak2
Mansc1
Prkacb
Zfp219
Alg8
Zfp987
Cdh10
Pcdhb12
Jarid2
Agk