ChIP-Atlas: Target genes

Potential target genes for Lhx3

Query protein: Lhx3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1706942 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Lhx3's Target genes

◢ Lhx3: Average

◢ SRX1706941: mESCs, differentiated

◣ SRX1706942: mESCs, differentiated

◢ SRX1706944: mESCs, differentiated

◢ SRX1706945: mESCs, differentiated

◢ SRX1706946: mESCs, differentiated

◢ SRX1706947: mESCs, differentiated

◢ SRX1706952: mESCs, differentiated

◢ SRX1706953: mESCs, differentiated

◢ SRX1706958: mESCs, differentiated

◢ SRX1706959: mESCs, differentiated

◢ SRX1706965: mESCs, differentiated

◢ SRX1706966: mESCs, differentiated

◢ SRX1706967: mESCs, differentiated

◢ SRX1706968: mESCs, differentiated

◢ SRX1706974: mESCs, differentiated

◢ SRX1706975: mESCs, differentiated

◢ SRX1706976: mESCs, differentiated

◢ SRX2388060: mESCs, differentiated

◢ SRX2388063: mESCs, differentiated

◢ SRX2388064: mESCs, differentiated

◢ SRX2388067: mESCs, differentiated

◢ SRX2388068: mESCs, differentiated

◢ SRX2388069: mESCs, differentiated

◢ SRX2388070: mESCs, differentiated

◢ SRX2388071: mESCs, differentiated

◢ SRX2388072: mESCs, differentiated

◢ SRX2388074: mESCs, differentiated

◢ Lhx3: STRING

Kank1
Tcstv3
Mcf2
Ubxn10
Pla2g2c
Brox
Aida
Snx18
Kpna1
Rab38
Cldn34d
Bin2
Nrp1
Nfe2
Nhsl1
Sash1
Sytl2
Cars
Kcng3
Sepsecs
Qrfpr
Il31ra
Phc1
Krt8
Lmo4
1600014C23Rik
Rasl11a
Ror1
Esrrb
Irgm2
Akap17b
Pgk1
Emb
Tmeff1
Sostdc1
Rln3
Il27ra
Hoxc10
Plekhh3
Cntnap1
Ccr10
Pxn
Lrmp
Mpp4
Pmfbp1
Sipa1l1
Edar
Abhd6
Zcrb1
Pphln1
Pgpep1l
Rnase12
Rnase11
Gm4791
Nrf1
Zfp516
Frmd4a
Gja5
Slc25a40
Dbf4
Copz1
Btla
Sspn
Zbtb8a
Pdlim3
4921524J17Rik
Slc7a7
Cdh12
Olfr806
Tnfrsf19
Oasl1
Lrrc52
Atp2b2
Olfr492
Ascl1
Zfp608
Mup4
Lats2
St3gal1
Ptprz1
Nol4
Shroom4
Cdh20
Tyr
Zfp3
Eml1
Gm5165
Rps19
Taf1d
4931406C07Rik
Lmx1b
Alkbh5
Ogn
Rbm27
Bsx
Id3
Rbm47
Kdm3b
Ntn1
Asmt
Ypel1
Kcnn2
Hmga1b
Hmga1
Arhgef33
Fam43a
Slc17a8
Psmc6
Sms
Pakap
Prkab1
Psap
Csf2ra
Zfp879
Traf3ip1
Krt72
Gm51425
Gm4861
Nptx2
Mid2
Cybb
Zfp984
Atp8a1
Zfp960
Ndst1
4930474N05Rik
F2rl1
Lmo3
Gm14325
Hacd4
Fbxo7
Dock10
Gm6710
Gm14391
Myef2
Trim2
Dusp23
Gm29797
Pcdh12
Cyp2j12
Cfap54
Krt222
Ddx19b
Tmem125
Mnx1
Pkdcc
Tenm2
Tmem30c
Gm14410
Prkar2b
Chd7
Ifna13
Abca4
Aqr
Cdh23
Rce1
Neil1
Fezf2
Trex1
Shisa5
Ccpg1os
Ccpg1
Cdk19
Atg4c
Arxes2
Creb3l1
Neurod1
Sctr
Coro2a
Lix1
Wwox
Myo1b
Tjp2
Cd59a
Mad1l1
Rgs8
Fgd4
Zfp715
Rorb
Ptpn12
Pdlim1
Kdm4c
Laptm4b
Cbx1
Hoxa1
Eif4e1b
Fgfr2
Gm38396
Uts2b
Dnajb8
Kcnh8
Tagln3
Cldn3
Gdf5
Pde4b
Sema5b
Atp6v0a1
Lrrc4c
Cdca7
Tfeb
Knl1
Hadh
Zfp991
Slc9a9
Sec24b
Gpr141
Pls1
Nup93
Sfi1
Timm9
2700049A03Rik
Prkaa1
Cfap36
Myt1l
Lsm14a
Cotl1
Gnat2
Slc6a5
Galr3
Nfkbil1
Atp6v1g2
Mrvi1
Lama2
Cyp7a1
Txlng
Zfp931
Pax6
Trim7
Cep112
Taf12
Caly
Rnase4
Ang
Cnpy1
Mlxip
Ankrd36
Raph1
Mest
Peli3
Tcf7l1
Nfatc4
Atg7
Bphl
Esrrg
Trub1
Gm14326
Lmo7
Cd38
Nt5c2
Ina
Tmco5
Angpt2
Erbb4
Zkscan1
Zeb2
Atp5g2
Tcte3
Gm3448
Gm3417
Ermard
Nnt
Col6a6
Arhgef18
Gja1
Peli2
Ldlr
Osgin2
Enc1
Fam171b
Rsph4a
Nt5e
Grpel1
Tmem107
Arid3b
Zfhx4
Hesx1
Olfr812
Ankrd50
Bdnf
Hmgxb4
Kdm2b
Rab27a
Rdh11
Mbnl2
4930503B20Rik
Arhgap36
Ppp3ca
Scml4
Lig3
Ppp3r1
Usp1
Elobl
Foxp1
Cipc
Mbp
Cbx5
Optn
Vmn2r24
Rere
Bambi
Cul2
Csta3
Kat2a
Hspb9
Tbc1d9
Prph
Tnip3
Neo1
Armc3
H4f16
H2aj
Ccng1
Zfp97
Kdm1a
Zfp473
Vrk3
Smarca5
Tdrd3
Alg8
Spp2
Gas2
Fancf
Sema6d
Usp25
Tspan15
Lmo1
Ndufaf4
Snca
Morc1
Daam1
Lrrtm4
Htr3a
Olfr1286
Bcas2
Gm5820
Ttc32
Pcdh1
Lef1
Olfr1046
AI429214
Tshz2
Znrf4
Dipk1c
Wee2
Sulf2
Raet1d
Ccr6
Ifnb1
Dpf2
Lrrn2
Vmn2r2
Chmp1b
Apbb2
Chst7
L3hypdh
Jkamp
Gpr139
Angpt1
Acbd5
Dennd11
Zfp703
Ttll3
Kifc3
Onecut2
Ccdc107
Etl4
Morf4l1b
Olfml1
Grm4
Fndc3b
Rtn1
Arid1b
Enox1
Rab3gap1
Ntn4
Crybg3
Ppia
Mia3
Unc5c
Xylt2
Celf4
Oser1
Arhgap33
Fgf1
Vax1
Aen
Spaca7
Trp53bp1
Phc2
Cilp
Dennd4a
Olfr107
Olfr1282
Acadl
Ubiad1
Mtor
Ubqln4
Lamtor2
Gabrg2
Foxd3
Tm4sf4
Ext1
Dll1
Raet1e
Raet1c
Raet1b
Tmem178b
Olfr60
Olfr846
Eef1akmt1
Serac1
Gtf2h5
Mylk
Slc10a1
Slc10a4
Gm7244
Abi2
Tshr
Pla2g2d
Mamdc2
Wdcp
Nutm1
Nop10
Pde7b
Prkab2
Tmcc2
Sh3glb2
Miga2
Bhlhe22
Hopx
Gpm6b
Taar9
Smco4
Xrcc6
Desi1
Pxylp1
Onecut3
Kctd9
Cdca2
Zfp217
Slc25a35
Rangrf
Tbc1d23
Arap1
Plekha1
Zdhhc16
Exosc1
D7Ertd443e
Lima1
Epn2
Tbpl1
Ust
Asf1b
Ackr1
Ctbp2
Nr6a1
Dct
Saxo2
Efl1
Zcchc24
Ssu72
Tnks2
Plekhm1
Gm8165
Zfp663
Fbxo31
Spx
Abracl
Taar7b
Vnn1
Apbb1
Tamm41
Dchs2
Efna5
Sall4
a
Hapln1
Ppp1r17
Vmn2r82
Thrb
Adtrp
Gm15319
Ebf3
Fzd5
Mrap
Adar
Cacng1
Zfp869
Srek1ip1
Fech
Zfp260
Cyth3
Cyyr1
Myt1
Chrna4
Myh3
Filip1
Cdh24
Kcnh2
Klf6
Mrps25
2510009E07Rik
Sv2a
Msi1
Baz2b
Akr1b3
Nfe2l3
Vmn2r102
Tbr1
Stk33
Arid4a
Serpinb2
Zfp707
Col11a1
Fbln1
Zbtb18
Ank3
Atp8b4
Nim1k
Slc25a25
Prpf40a
Arl6ip6
Esr1
Gm21119
Mro
Otol1
Tent5a
Zfp91
Lpxn
Usp44
Mrps33
Kcnj16
Skap1
Slc39a10
Erg
Sem1
Tcf15
Baz1a
Slc35f3
Mobp
Cacna1c
Olfr108
Ttc30a2
Aff1
Ptpro
Hacd3
Pop5
Bcas1
Mfng
Rxrg
Tle3
Ccnq
Gramd1b
Uqcc3
Lbhd1
Phactr3
Chmp6
Lingo3
Aadacl2fm1
2210418O10Rik
Arhgap28
Pcbd2
Lama1
Riok3
Arhgef2
C2cd5
Cfap43
Cibar2
Fbxo32
Gm17026
Fam13b
Lipm
Toporsl
Vmn2r5
Prtg
Dip2b
Klhl29
Irx5
Piwil1
Ilvbl
Ebf2
Arid1a
Bnc2
Trafd1
Insyn2b
Zfyve26
Rad51b
Cyth1
Nrep
Gspt1
Lpar6
Gnai1
Inip
Mbtps2
Usp15
Kitl
Nr4a2
Sh2d4a
Rabepk
Mpzl1
Muc15
4930467E23Rik
Olfr62
Lhx5
Synpo
Ehmt2
Gm17124
Mgat4a
Jmjd1c
BC048507
Ubr5
Impdh2
Smug1
Homer2
Lgals12
Dnaic2
Mical3
Tti2
Foxa2
Mical2
Fgf15
Pitpnm1
Mrpl22
Gemin5
Myo1e
Gm11837
Ranbp9
Gm14296
Armh4
Gcgr
Lrig3
Rcor3
Gm3173
Gm9508
Atp1a1
Nt5c3b
Klhl10
Neurod4
Scg2
Micu2
Fam222b
Barhl1
Irx4
Ucma
Skil
Rps10
Ppfia4
Cyp2b10
Negr1
Wdr17
Cep350
Ttc30b
Megf9
Snw1
Actn4
Stk32a
Gcn1
Ubap1l
Mrpl45
Wbp2nl
Dpp10
Myl12a
Upf3a
Add1
Myo10
Lrp2bp
Atxn7l1
Fzd8
Iapp
Zfp423
Iqschfp
Iqcj
Mrps28
Myl1
Vtcn1
Pcbp4
Abhd14b
Gng3
Bscl2
Rexo1
Spidr
Hmcn1
Dstn
Sacs
Map7
Cd200
Ptms
Gpr137
Bad
Inpp4b
Slc16a7
Ankrd6
Npffr2
Bcar3
Eif2d
Ush2a
Cdc42ep3
Arap2
Crx
Taar6
Ppp1r2
Erich3
Jagn1
Amacr
Xrcc5
Zbtb2
Txndc2
Vmn2r4
Tmem202
Ptpn14
Olfr1532-ps1
Tra2a
Lefty2
Zfp462
Pclo
Otx2
Scd3
Lag3
Ppp2r2b
Accsl
Gm3752
Mageh1
Ablim1
Commd4
Gnas
Smad5
Kcnk2
Zfp979
Rnase9
Ddx6
Gm6712
Zc3h12c
Chpt1
Rdm1
Sohlh2
Cldn14
Ppp6r3
Lrrc10b
Fbxw2
B3galt5
Asb4
Radil
Acat3
Ncoa4
Elmo2
Sdk2
Ccdc171
Tac4
Trim24
Tmc5
Olfr1240
Col3a1
Elavl2
Chn1
Colec12
Sox2
Alk
Pex5l
Tsc22d1
Acaa2
St6gal1
Vangl2
Lingo2
Gm3739
Acp6
Tcaf1
Jup
Fzd10
Arid5b
Atxn1
A1bg
Rps12
Col12a1
Rragd
Zic3
Gm1113
Gm3696
Kifc1
Cep120
Xkr5
Bcor
Zmym2
Tmem30a
Acyp1
Tcl1b3
Tyro3
Ttc23
Lrrc28
Optc
Cenpv
Pgm5
Alpk3
Gfra3
Tmem37
Shroom3
Otud1
Hey2
Sec61g
Stk38
Abr
Bms1
Epb41l3
Prps1
Zfp534
Pop4
Exosc9
Gm4907
Ptpn9
Zfp980
H1f0
Gcat
Rfx4
Th
Fam110b
Hhip
Il18rap
Sptlc2
Skor1
2610042L04Rik
Vgll1
Ndufa4l2
Rab5a
Srp19
Cast
Rag1
Ank2
Irs4
Acvr2a
Zfp382
Vkorc1l1
Drd2
Apobec2
Lhx9
Meox1
Otx1
Has2
Grik3
Pik3ap1
Pipox
Smad2
Gm2956
Asic5
Asic1
Myb
Plcd3
Acbd4
Phlpp1
Kcnv2
Spns1
Spock3
Cog3
Zbtb11
Ints4
Fkbp5
Tctex1d1
Grap2
Arid5a
Pdha1
Neurog2
Thsd7a
Atp2c1
Sh2d7
Sox5
Smarcal1
Smndc1
Otoa
Unc13b
Nbdy
Rraga
Zfpm1
Zfp985
Plekhg2
Fabp7
Atp6v1e2
Nxph4
Hspa8
Gpr1
Clasp2
Zfp385b
Cacng4
Zmat4
Gatad1
Por
Lsm1
Bag4
Ttc34
Lrrc30
Lrpap1
Errfi1
Gtdc1
Trio
Rnf43
Rgmb
Syt2
Ncoa3
Gm10406
Pgrmc2
Phyh
Myl12b
Tmem273
Pcnx
Zc3h4
Drg1
Trhde
Cd36
Rex2
Dusp4
Cldn10
Tcf12
Cga
Tdg
Runx1t1
Mroh1
Rbfox2
Gipc2
Spcs3
Creb5
Lims1
Crppa
Synpr
Sirt4
Mov10l1
Mlc1
Fam76b
Cep57
Lipg
Frem1
Nmnat3
Nemf
Cd300lg
Zfp987
Tmem156
Selenos
Arhgef28
Ifitm2
Hmx1
H2-T23
Abcd3
Acpp
Ccn2
Foxb1
Mcur1
Tmem74
Wdr95
Pkmyt1
Pias1
Ccdc88c
Naa40
Cry1
Slc25a19
Sulf1
Nkx3-2
Pak2
Tex2
Rnf38
Efnb2
Nars
Gmnn
Eya1
Agtr2
H3c11
H2bc22
H2ac22
Acvr1c
Mcub
Rab5b
Sox4
Galc
Reep3
Thg1l
Gm10710
Prkcq
Ermn
Ovca2
Polr2m
Tcerg1
Rnf2
Itprid1
Pde11a
Cemip2
Gas1
Dll4
Rwdd1
Anxa2
Agpat3
Pbld2
Hnrnph3
B4galt5
Slc19a3
Fap
Slc48a1
Tesk2
Adgrg7
Gm20594
Rbms1
Nbeal2
Ccdc12
Slc20a1
Sall1
Rtraf