ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026267 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◣ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PHF12
CCDC71
CSTF1
AURKA
MYRF
WFDC9
WFDC10A
EDN3
SLCO2B1
MIA2
SPTBN4
SLC7A7
SPHK2
DBP
PAOX
ECHS1
SPON1
TSC22D1
MORC1
BTNL8
SLCO4A1
SELENOP
HNF1A
PKP4
CCDC148
ZMIZ1
PPP5D1
CALM3
SMIM24
BRMS1
B4GAT1
LRRC1
RPS7
SMPDL3A
PTP4A1
KIF21A
LGALS4
RHOC
KDELR2
VIL1
CNNM3
ISG15
HES4
PET117
KAT14
SIRT7
NPB
PCYT2
PLEKHG6
ADAP1
CEBPG
PKDCC
FAM107B
NODAL
LASP1
RPS3A
ACY3
ZBTB46
TREX1
SHISA5
TPCN2
CACNB2
STARD4
COMTD1
CERS2
INAVA
APOC3
APOA1
APOA4
CDH17
ZFP36
PLEKHG2
VRTN
PSMD1
FAM131B
LOC390877
GTF2F1
GPR171
UQCRHL
PTCD1
CPSF4
LHPP
AHCY
RAPGEF1
POLR2E
GPX4
CARM1
WDR36
PPEF2
LENG8
ERBB3
TATDN3
NSL1
ACOX2
ATE1
HIC2
IL20RB
SMARCD1
ASIC1
MIDEAS
IGSF23
GDF3
DPPA3
ACOT7
ADGRG7
CAMK2G
ZNF488
CCND2
MVP
CRYBG2
SEH1L
SLC51B
ZNF567
HMOX1
EPS8L2
DEAF1
DENND2B
EHD1
SIN3A
FITM2
F7
NMD3
GTF2I
NOL4L
ZNF541
TEP1
PLXNC1
FBXO31
ATP6V0A1
PLIN3
CLIP2
SLC35D2
GATA3
PANK1
MRPL44
STX16
ANK2
TMEM262
IL17RE
CDK5RAP1
PCGF1
LBX2
MACC1
THRA
GSE1
CSF1R
RBKS
BABAM2
TNRC18
LOC100129484
BCAT1
PAK1
ORC2
RAB11FIP4
GIMAP5
CAMKV
HAAO
TACR2
TNFSF15
JMJD1C
LAMB1
IRF2BP2
CXCL17
IL6ST
LIPE
KCNE3
GUCA1B
SDHAF1
MMP24OS
MMP24-AS1-EDEM2
FAM83C
EIF6
MOCS1
RAB5IF
TMEM41A
DIDO1
INPP1
PINK1
CDR2
RNF214
PCSK7
CREB3L3
SLC39A14
VAMP8
VAMP5
AMACR
PRKCD
WEE1
FOXA3
POLDIP3
RSPH10B2
RSPH10B
PGF
DIP2C-AS1
PTBP3
LYRM7
HINT1
FGFR3
SLC3A2
KNL1
LY75-CD302
LY75
VTN
SEBOX
SARM1
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
NEK2
GGT1
SPDYE14
SPDYE10P
ZNF214
NLRP14
RAD52
PAF1
MED29
TANK
C11orf49
EHBP1
GSDMB
SCAF11
GNA11
ANKRD40CL
F10
TULP4
EPOP
WDR74
STX5
PDE4D
BRCA1
IGF2BP3
TCEA2
CPLX2
TSPAN18
ABLIM1
GPR142
METTL15
KIF18A
DGAT1
METTL24
TNS3
PRUNE1
MINDY1
EPHX2
PACSIN3
CHRNA2
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
PLEC
BIN1
REG4
TACO1
WSB2
CWC25
CLPB
SPPL2B
LSM7
OR2F1
TMBIM1
KRTAP5-11
MYADM
LGALS2
MGST2
CGN
PPP1R27
MCRIP1
RAB17
BORCS7
ZNF827
APOB
NRCAM
SLC4A8
GALNT6
SRCIN1
FN3K
MTA3
PARD3B
SH3D19
GPC3
CREB5
KHNYN
CBLN3
MMADHC
CYP17A1
PON2
JOSD1
PHF14
SUCLA2
SLC45A4
NLRP2B
TNFAIP1
IFT20
NCOA4
CORO2A
HEXIM2
CEACAM18
TMEM169
PECR
RAB6A
USP2
NDUFS1
EEF1B2
AGT
CDX2
TP53I13
ABHD15
PAX2
CORO1C
HGD
PDZK1
SMAD3
HDHD3
LSM14A
SPRYD7
SELENOI
ADGRF3
COX16
LRRC29
VAC14
DNAJC25-GNG10
DNAJC25
GIMAP4
AFF1
PICALM
ZBTB48
HPCAL1
DTX2
AMBP
PLXNB2
SPINT2
KMT2D
RHEBL1
KDM6B
FUOM
PRAP1
PITPNM1
CNTN4
RIPK4
ID1
ZSCAN2
MAMDC2
ATP9A
EIF1AD
CST6
BANF1
SLC9A3R1
EDEM1
CASTOR2
SSTR1
SLC6A19
ARHGAP35
AP2S1
ABCC10
ZNF529
ORM2
ORM1
FOS
MICAL2
COLCA2
RNASE4
ANG
CARHSP1
TMEM181
GNAL
CHMP1B
BLOC1S5
C2orf88
TFEB
PGC
TSPAN3
ATOX1
DOCK9
TEF
NUDT13
TSPAN32
C11orf21
DHRS3
LTBP4
HNRNPL
RBM42
PLPP5
PABPN1
SLC25A44
RAB37
POR
PIM3
MRPL16
AGPAT2
CCDC90B
NCKAP5
IL19
IL10
PPIP5K2
PDZK1IP1
SLC7A5
PRDM10
CEACAM16
TOR1B
GALNT16
DMAP1
NT5C3A
AGBL3
VDR
PHLDB3
CDC14B
KLHL8
ARHGEF39
SIT1
CCDC107
FAM222A
COL13A1
TECTB
MYL12B
MYL12A
SERP2
TECR
DNAJB1
IYD
U2SURP
SP1
MRPL48
TRIM48
MGAT1
VIPR1
COL21A1
SH3GL1
NEK4
ITIH1
CPHXL
KMT5A
CARD16
PDZRN3
CASP1
EPS8
VHLL
TMEM79
SMG5
GLMP
PTDSS2
ANO9
TSPAN8
DTX4
OR6C68
SPA17
SIAE
ZNF432
SPATA2
KLHL35
DCBLD1
H3C7
H2BC9
CALML3
NUMB
SOWAHA
CSNK1D
STK24
NHSL1
CAMSAP3
NDUFS7
CNOT2
CD244
PGAP3
ERBB2
BCL9L
KDM2A
LOC102724265
TMEM115
NPRL2
CYB561D2
TRIP4
PCLAF
MAPKAPK5
NAPEPLD
RBBP5
CBFB
CLN6
C19orf33
NPAS4
IQANK1
FAM83H
PEPD
SMAGP
STARD7
CCR6
FZD5
ST3GAL6
MYH14
FMN1
PSD4
IPMK
CISD1
SNRPA
C19orf54
ANK3
NUGGC
ELP3
RAG2
IFTAP
ACSL5
PROCR
GSTK1
SKIV2L
NELFE
DOCK6
KIF1C
INCA1
TJP3
OPTN
CCDC3
PLEKHG5
NRXN2
REEP6
PCSK4
SLC27A3
CCN2
DOCK5
AJUBA
ZNF564
RGL1
ARPC5
AHSG
CA9
EHHADH
SMIM35
TMPRSS4
DDX23
SLC25A5
NET1
LIPK
FOXP1
AGXT2
ESRRA
CATSPERZ
POLD4
SMG8
CDHR2
RNF44
MBNL2
MSH5
DDAH2
CLIC1
UBE2V1
KLHDC2
TBCCD1
DNAJB11
ADI1
CCDC146
MRGPRF
RBBP8NL
OTC
NSMCE1
IFNGR1
TAF6
MBLAC1
CNPY4
FAM3C
CTSB
NME4
DECR2
MBNL3
NDUFS3
KBTBD4
FAM180B
VPS54
PRELID3B
AQP11
HEXB
AHDC1
DNASE1
URGCP-MRPS24
URGCP
ZMYND8
C5AR1
SLC6A4
IST1
PAK4
SPATS2L
CHMP4B
TOMM40L
FCER1G
APOA2
ZNF782
KANK1
TMEM254
NAGLU
PRSS8
ASAH2
METTL7B
NDST1
ABR
SMARCD2
GALNT11
BOD1
MYOM1
RELL1
CDCA3
ZNF165
OR1F12
TMEM176B
TMEM176A
TMEM92
TDRD7
RBM33
MTA2
ACTB
TUT1
TCP10L
ADGRG1
GTF3C3
C2orf66
PRR5
B4GALT4
DDAH1
IL1R1
USH1C
OTOG
GPR39
WDR24
STUB1
JMJD8
SLA
CATIP
PTK2B
OPA3
ZBED9
CSRNP3
CRNKL1
CFAP61
SGCA
LRRC43
IL31
NR1D1
NQO1
IRF2BPL
MBL2
SYNPO
HNF4A
PRG2
KCNIP2
PHETA1
ERICH3
TNFRSF10B
PLK2
SLC13A2
NUF2
F11R
ZNF219
TMEM253
PRKCSH
CCDC151
CES3
NPC1L1
NUDC
NR0B2
KIF5B
DDC
ACSS1
C1orf74
RBM39
PAPLN
NOSTRIN
DENND10
NCEH1
FAM149B1
ECD
NFATC3
BANP
CFB
INTS4
DYNC1I2
ATP8B1
LYST
ZMAT1
ABCC3
ZNF487
TDP2
ACOT13
WAS
TAS2R19
MESP2
RHOBTB2
SLC23A3
RETREG2
CNPPD1
NHEJ1
TCIRG1
NDUFS8
H4C3
H1-6
SAR1B
HHIPL1
CCDC85C
FRA10AC1
DSTYK
HPGD
KNDC1
LBR
PPIL2
MMP15
SEC16B
AAR2
BMF
LIMK2
STC2
DNAJC22
GPR137
SCP2
SLC10A5
IMPA1
GRTP1
CCL16
PLEKHS1
FASTKD1
BCL2L1
GPANK1
CSNK2B
C6orf47
APOM
BAG6
NOMO2
ZBTB39
GPR182
USP30
C1orf174
HJV
IL1A
BCL7B
LRP2
NDUFA6
ZNF768
ZNF747
PPP1R14A
MROH7
TTYH3
RPL34
TPCN1
ZNF516
IQCD
TMEM185B
UBE2NL
UBA5
ACAD11
SERTAD2
ZNRF1
WDR59
PDXP
DENND1A
SURF4
ASS1
GNG4
TAOK3
SUDS3
KRT8
CDC42EP4
NR2F6
KRT18
C1orf210
TBC1D22A
FGG
SEC23A
TNFAIP8L2-SCNM1
TNFAIP8L2
C20orf204
SCNM1
LYSMD1
MRPL11
TMOD4
AVPI1
NPY4R
NPY4R2
HSDL2
TPM3
PTPRR
FBXO46
CNIH1
BCL3
THUMPD3
SPSB1
TTR
PRRG2
NOSIP
CSTF2T
EAPP
SEC24A
ZNF205
CYB5B
SOS1
IFIT1B
BMP4
GPA33
GPRC5C
CRYGC
CRYGB
CEBPA
TOMM40
ACSL1
SMIM13
EDN1
TFEC
DOK4
IL17RB
CHDH
SMIM11B
SMIM11A
TMEM86B
WNK1
KBTBD6
HNMT
SOCS5
AATK
N4BP2L1
GMEB2
ZNF576
IRGQ
FABP1
WWC2
TMEM245
TENT5A
AGMAT
RHEX
UBR4
FEM1C
ZNF207
C17orf75
CERKL
INPP4B
UPB1
GJB3
GJA4
HSPB3
PCNX3
MAP3K11
ZSWIM1
SPATA25
NEURL2
CTSA
SNRPD3
GUCD1
SMIM19
SLC20A2
RBMS1
NSUN5
OR6V1
CHST5
MEF2C
ARID5B
NPR2
AKAP1
SCN9A
TAF4
PAFAH2
SUPV3L1
MRPL20
CCNL2
ADRA1D
TMEM71
PHF20L1
FTL
BAX
PLA2G12B
PDE6D
COPS7B
CYP2R1
ZFYVE1
UBA6
TNIP1
CRY2
GSTP1
MYEOV
UPK3A
PPRC1
YJU2
GCLC
ZBED1
DHRSX
IER5L
SYTL2
TESK2
MMACHC
GLYCTK
CLDN4
SRC
S100Z
NFATC2
PLA2G4C
SLC46A1
POLR3F
GET1
HADHB
HADHA
PUS10
PEX13
CFLAR
ANXA9
OTULIN
GPD1
COX14
HEPACAM
APBB1
GAMT
DAZAP1
MARK2
ARHGEF3
GTPBP4
CMAS
LSM1
BAG4
CPPED1
TMCO1
H3-4
TNFRSF21
KRT34
GPR35
MRPL2
KLC4
CUL7
MOGAT2
CLNS1A
ZMYND10
ISY1-RAB43
ISY1
KIFC3
ELAVL3
GATAD1
KCNN3
GAS2
LOC388282
TFPT
PRPF31
PEX14
DFFA
AGPAT3
ZNF444
TRMT2A
RANBP1
ALPI
TMEM242
RAP2B
GAPDH
PDPK1
RAB32
ASL
CREBRF
KATNB1
ZNF641
PDE4DIP
TMCO6
FANCF
ELF3
NDUFA2
IK
PDGFRB
CDX1
TLN1
CREB3
TMEM144
APOL6
GRIP2
ANAPC5
TMEM109
PRPF19
EPAS1
WDR46
RGL2
PFDN6
S100A2
KRR1
PRKAG2
SULT2B1
OXCT2
WDR81
TLCD2
MYO1A
GHDC
MGAM
NOMO3
ABCC6
TRIM15
TRIM10
SYBU
MUC3A
ACSF3
FGF19
ATP7B
ALG11
AP1B1
OR9Q2
CIRBP
KALRN
TMEM167B
MSRB2
RPL29
JRK
LCT
DNAAF2