ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748425 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◣ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

KDM6B
ISG15
HES4
SCRT2
MAMDC2
MIA2
NSMCE1
CRYBG2
NDUFS1
EEF1B2
PHF12
SKIV2L
NELFE
PPIP5K2
CSTF1
AURKA
URGCP-MRPS24
URGCP
ARHGEF39
SIT1
CCDC107
RBKS
BABAM2
DNAJC25-GNG10
DNAJC25
C11orf49
SCAF11
DUX4
PADI3
KIF5C
WDR74
STX5
CCDC71
SFRP5
NEK2
MYC
CCDC90B
ACSL5
LSM1
BAG4
SLC7A5
MTRNR2L2
MSH3
DHFR
B3GLCT
MTRNR2L1
MTRNR2L8
RHOC
SLC3A2
WDR36
ATXN7L1
ZFP36
PLEKHG2
UQCRHL
RTBDN
MAST1
SLC9A3R1
POLDIP3
PPP2CB
GNAZ
CD2BP2
LOC100509620
BCL9L
KNL1
PLEC
RGPD2
RGPD1
SPTBN4
CDC14B
U2SURP
RPS3A
RABGGTB
NR1I3
ZNF764
SNRPA
C19orf54
EXOC1
SLCO4A1
MTFMT
SPHK2
DBP
PLOD1
KIAA2013
MORC1
CEP152
LASP1
SEC24D
IST1
ZSWIM3
ACOT8
PIH1D1
ALDH16A1
IDH1
CCL20
YARS1
S100PBP
COL23A1
EIF1AD
CST6
BANF1
ATRN
GFI1B
TSC1
ARL14
SEPTIN4
RAB5C
FHL2
RPS7
SH3D19
IFI35
RPL27
RAB17
CD86
MRPL11
EPS15
INAVA
SPON1
LCN12
FBXW5
C8G
PCBP1
APOBEC3H
SOWAHA
PRKCD
PRR3
GNL1
PLK2
POLRMT
FGF22
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
KIF21B
SYT7
PCNX3
MAP3K11
METTL7B
CCDC200
SNRPF
TNS3
EAPP
MIDEAS
SPAAR
HRCT1
ABHD12B
FAM169A
DSTYK
LENG8
C1orf174
SASH1
IRF2BP2
PIKFYVE
CCND2
TAOK3
SUDS3
TRIM2
ZC3H10
RPL41
LOC390877
GTF2F1
C1QTNF1
LOC102724770
DGCR6
PLAUR
SIAH2
UROS
BCCIP
RNF10
COQ5
ZNF585B
ZNF383
EPS8L2
DEAF1
NCS1
PPP1R37
GOLGA4
ABCC3
CLCF1
ABLIM1
OCIAD2
FAM98B
TBCCD1
DNAJB11
TRIB3
LARP1
ERICH3
SAMD1
C19orf67
PTP4A1
FCHO2
MRPL24
HDGF
LIPK
RBM27
MAN2C1
ZBED9
ZNF564
B3GNT3
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
BORCS7
POLR1E
TMEM262
OGT
MYRF
FBXO46
MRPS28
PAQR4
KREMEN2
LMTK3
USP37
CNOT9
PDAP1
BUD31
GALE
CARM1
ZNF219
TMEM253
NCKAP5
TRIM48
SNX16
PRKCSH
CCDC151
SFTPC
HNRNPH1
OXCT2
GUCA2A
ARPIN-AP3S2
ARPIN
MRPS30
ZSWIM1
SPATA25
NEURL2
CTSA
ATP5MC3
CUX1
SH3D21
GOLGA8B
PCGF1
LBX2
KCNC3
HAO1
SLC52A1
SP1
IGFBP4
STAT3
LOC102723996
ICOSLG
MLEC
MDM4
ADGRA2
WDR1
INTS12
GSTCD
PTPRF
FUOM
PRAP1
KMT5A
ZKSCAN2
PIM3
MSL1
RAD50
MEAK7
CHD1
ACE
HMOX1
CREB3L3
TNFRSF10B
C11orf86
TINAGL1
LOC730098
CCL27
TJP3
ART1
KPNA7
FRG2C
PAFAH2
KCNMB4
POLR2E
GPX4
SPDYE14
SPDYE10P
CASTOR2
ONECUT3
IDNK
RPL12
LRSAM1
SNRPB
FRG2
PDPK1
CEMP1
NUDCD1
SMARCD2
RAB11A
TMEM181
LMNB2
TREX1
SHISA5
LSM5
AVL9
RAPGEF1
ARNT
GSTA3
SEC23A
TRIP12
FBXO36
KRTAP5-7
ATXN2
SSTR5
CAMK1D
ANXA11
ZNF768
ZNF747
RPL23A
RAB34
PROCA1
TLCD1
KLF6
BRD4
NMD3
GFM1
MAD2L2
FBXO6
GDF15
MMP15
RBIS
EPB41L4B
KLRC3
ALG10B
FNDC11
RPGRIP1L
FTO
HELZ2
CCNI
LPAR2
GMIP
PPP1R13L
POLR1G
MKRN3
ALOX12B
GAL3ST1
MIA3
GDA
LOXHD1
USP2
RPL34
AHSP
ALG10
PSMA5
CMC1
RCAN1
COBL
ADPRHL1
GJB1
NKPD1
SELENOP
TMEM101
CD9
PYY
NAGS
KDM5A
CCDC77
BAZ1B
RAD51AP1
C12orf4
RFX2
CMC2
CENPN
ERBB3
TRIM15
TRIM10
DENND5B
MMP20
GALK2
COPS2
CNDP1
CLASP1
SH3BP5L
STRA6
SLC27A5
MCRIP2
PISD
WDR90
BBC3
H4C3
H1-6
ZNF592
SNTB2
TMEM143
SYNGR4
CCNL1
LHB
CGB3
CALM2
MVP
EPS8L3
BIRC2
TTI1
RPRD1B
USP16
RWDD2B
IGSF23
TDP2
ACOT13
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
SBNO2
SLC27A4
NUBP1
ATF7-NPFF
ATF7
COL5A3
METTL25
CCDC59
TARS2
PEMT
TOB2
PRAG1
OLFML2A
NR6A1
RIPK4
TATDN3
NSL1
GCLC
LRP1
RBFOX2
RNF223
STN1
AAR2
KRT36
KRT13
ORC2
GAB1
SERINC5
GNB1
PLA2G2E
LPIN1
CAB39
PHF14
PIP5K1C
HGS
ARL16
PPP5D1
CALM3
PABPN1
TPD52
CIBAR2
CHST11
NFXL1
PPP6R1
FUT5
JUND
IQCN
GPANK1
CSNK2B
C6orf47
APOM
LY6G5B
ASF1B
NUP62
IL4I1
ATF5
ADGRG1
PPM1J
MUC3A
ZNF77
HERC5
PRRG2
NOSIP
RGS3
TUSC2
ETV4
HYAL2
HYAL1
SMIM29
HMGA1
PDE4C
EPS8
PAX2
TMEM169
PECR
TM4SF1
IL20RB
RBBP5
RPS29
SPOCK2
PRMT1
IRF3
BCL2L12
PJA2
SLCO2B1
MBD3
IER5L
H4C12
H4C11
SYTL1
H2BC14
H2AC14
SRSF11
LRRC40
FAM110B
VPS25
WNK4
H1-0
GCAT
MTFR2
ISCA1
HEXIM1
ZBTB48
LIMK2
LAMTOR5
RAB11B
NUCKS1
CXCL17
ZNF165
OR1F12
MRPL34
DDA1
ABHD8
EIF4A2
ITPK1
PPP1R12B
UBE2T
IKZF3
SLC41A2
LAPTM4A
PLXNB2
RPS6KA1
KATNB1
NQO2
GPR137
PLXDC1
SAXO2
EFL1
ZNF526
AFF1
PHC2
ITGA3
ADAM22
MYL12B
MAP4K5
ATL1
NUF2
MRPL30
MITD1
NFATC4
IL6ST
KLRC2
MRPS10
CRYGS
BANP
SMG7
LGALS1
ATF4
GRPEL2
RNF43
PHACTR3
INTS4
FOSL1
FIBP
CCDC85B
PYCARD
NRP1
PARP2
CCNB1IP1
SMAD3
CAMK2G
PDE11A
VPS54
TMPRSS9
RARA
RAB11FIP4
NDRG1
GMEB2
DPAGT1
C2CD2L
C2CD2
PIPOX
KDM3A
FCGR3A
ZC3H12D
PTDSS2
ANO9
PRDM10
APBA2
ZNF335
TEAD4
UBE2R2
DOT1L
BAK1
MTMR11
NUP107
NEDD4L
FTH1
TBP
PSMB1
BEST1
PRR14
NR2E1
FBRS
POLG
OPA3
SHF
MPI
C1QTNF6
PSD
FBXL15
EHD1
KIF16B
CENPP
NOL8
LAMP3
WIPI2
MMADHC
NR2F1
NCSTN
COPA
BORCS6
RMND1
ARMT1
BPHL
PITX3
GBF1
ARHGAP32
NR1D1
TRUB2
COQ4
GBA
TRIP10
GPR108
C19orf33
TAF6
MBLAC1
CNPY4
PARP14
PTPN6
C12orf57
S100A16
S100A14
THRA
TTI2
SGO1
STK35
RMDN3
GCHFR
C15orf62
NME1
B4GALT4
PPP1R9B
TIAL1
GNAL
CHMP1B
LGALS2
CDC42EP1
IL1A
ZDHHC6
VTI1A
PAOX
ECHS1
PKP4
CCDC148
VIL1
CERS2
HNF1A
HAAO
CNNM3
PGAP3
ERBB2
VTN
SEBOX
SARM1
PSMD1
PKDCC
LRRC1
SLC7A7
PDXP
SEC13
PINK1
SIRT7
TACR2
GET1
AGPAT2
NUMB
NPB
PANK1
ZMIZ1
PCYT2
GPR35
DOCK6
MACC1
KIF21A
GPR171
CDK3
SMPDL3A
DIDO1
HADHB
HADHA
CLIP2
CPLX2
ACOX2
ARHGAP27
LHPP
ATE1
PHETA1
PRR15L
USP18
PHLDB3
ZNF567
GGT1
NRL
DCAF11
SLC20A1
AHCY
CCN2
FGFR3
MGST2
ACY3
GUCA1B
PRKAG2
SULT2B1
LY75-CD302
LY75
AP1M1
SLC19A3
AGMAT
PAF1
MED29
SRCIN1
DNAJC22
TULP2
NUCB1
CARHSP1
GPA33
CDH17
CSNK1D
TP53I13
ABHD15
TSC22D1
F11R
RAB37
EDEM1
VHLL
TMEM79
SMG5
GLMP
WSB2
APOC3
AKR1A1
VAMP8
VAMP5
SDC1
HNMT
SLC35D2
GPRC5C
LGALS4
PRUNE1
MINDY1
PLEKHG6
SNRPD3
GUCD1
DENND2B
BRMS1
B4GAT1
NOMO3
ABCC6
NCOA4
APOA1
DHRS3
RHEX
FN3K
DOCK5
CDR2
CYP17A1
PDF
AJUBA
F10
COLCA2
WEE1
C2orf88
AHSG
TPCN2
COPS4
PUS10
PEX13
CDHR2
MYD88
ACAA1
INPP1
TESK2
MMACHC
ASS1
SYBU
GSE1
IGF2BP3
SFXN3
PDZD7
NUDC
NR0B2
ID1
FBXO31
PPIL2
TIGD3
GDF7
AQP11
CERK
APOB
CSF1R
CFLAR
TTC31
CCDC142
SUCLA2
SDCBP2
CCL16
GLRX
SPATA2
TMEM177
GTF2I
STK24
TRAF7
RAB26
TTYH3
XYLB
POLD4
HDHD3
NQO1
COL21A1
COMT
TNRC18
LOC100129484
PET117
KAT14
CA9
PDLIM2
LAMB1
CBSL
CBS
CPNE5
WFDC9
WFDC10A
SCARB1
ANKS4B
SLC45A4
BCAR1
POR
AFP
GDI2
KRTAP5-6
TDRD7
PAAF1
DAND5
COA4
GIMAP5
TCIRG1
NDUFS8
LURAP1L
GAL3ST2
MRPL2
KLC4
CUL7
TK1
AFMID
PER2
NDUFA6
MYO18A
TCP10L
SMARCD1
ASIC1
KIF1C
INCA1
BLOC1S5
CTDSP1
PTK6
RSPH10B2
RSPH10B
MMP24OS
MMP24-AS1-EDEM2
FAM83C
EIF6
LIPE
ATP7B
ALG11
RAB5IF
KLHDC2
AGXT
UBR4
TMBIM1
ZNF827
APOA4
GPR142
PERP
CORO1C
MLXIPL
BRCA1
IQANK1
FAM83H
CBY3
PTK2B
MIDN
REG4
SH3GL1
ADAP1
HGD
FYB2
AGT
IQGAP2
IL32
RNF44
CFB
NID1
SMIM19
SLC20A2
CYB5R3
ATP5MGL
NOMO1
ZNF232
USP6
PLEKHB2
FAM168B
C1orf210
WAS
PPP1R27
MCRIP1
FAM107B
PTPRN2
CXADR
SRMS
TBC1D22A
SECTM1
GSDMD
KDELR2
IFNGR1
SOS1
TKFC
DDB1
HIC2
NIBAN2
NEK4
ITIH1
PTK7
MGAT1
C11orf24
RAPGEF4
TAS2R19
SPG7
LIME1
GNG4
MBNL2
STAT6
RAB43
MSH5
DDAH2
CLIC1
HSPE1-MOB4
HSPE1
HSPD1
GAPDH
TRIM47
CPNE7
PON2
FASTKD1
PALM3
CPPED1
DNAAF2
DOK4
G6PC
SEPTIN9
FITM2
ALKBH7
LYRM7
HINT1
PSPN
ITGB2
MAN1A1
TSPAN8
PABPC4
MOV10L1
SPPL2B
LSM7
PEPD
IL1R1
C1GALT1
SERPINF2
APOL6
ZSCAN2
PROCR
NHSL1
PHACTR4
LPP
PPP4C
GLYCTK
UCKL1
RUVBL1
C9orf64
IRF2BPL