ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748433 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◣ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

NSMCE1
ISG15
HES4
SCRT2
MIA2
CRYBG2
ACSL5
LOC100509620
MORC1
B3GLCT
CCL20
PPP2CB
SLC3A2
SKIV2L
NELFE
SEPTIN4
LENG8
ARHGEF39
SIT1
CCDC107
SIAH2
URGCP-MRPS24
URGCP
LOC390877
GTF2F1
EPS8L2
DEAF1
MIDEAS
NR1I3
SPAAR
HRCT1
SMAD3
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
FAM169A
ATXN7L1
CDHR2
GNAZ
PHF12
KDM6B
UQCRHL
CYP17A1
NDUFS1
EEF1B2
LIMK2
TM4SF1
SFRP5
EXOC1
MAMDC2
SLC20A1
PCNX3
MAP3K11
CAB39
MYC
CSTF1
AURKA
PLXNB2
POLR1E
PLAUR
ACAA2
SEC13
ABCC3
C19orf33
B3GNT3
SPON1
C11orf86
ARL14
CAMK2G
LASP1
SNTB2
IRF2BP2
DNAJC25-GNG10
DNAJC25
LOC102723996
ICOSLG
NCS1
ADAMTS14
NFE2L3
WSB2
MTRNR2L8
SCARB1
SLC15A1
ERICH3
RAB17
PLOD1
KIAA2013
TIGD3
RCOR1
ROCK2
ALDH2
CLCF1
SEC24D
PAAF1
COA4
GDF15
FUT5
MUS81
CFL1
CD163
ITPK1
LMTK3
SLC9A3R1
NEK2
RNGTT
INPP5J
AGPAT2
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
MIDN
CBARP
ATP5F1D
RCOR2
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
PTP4A1
SLC27A5
DPAGT1
C2CD2L
MRPL24
HDGF
TMEM270
XPNPEP1
PRR15L
IDH2
INAVA
SERINC2
PPP1R12B
UBE2T
LBP
S100A16
S100A14
CHST11
RGS3
RIPK4
PRKAG2
LIPH
RAD50
AKR1A1
VGLL4
IST1
CSNK1A1
STN1
GNAL
CHMP1B
CREB3L3
ZC3H12D
HMOX1
TULP2
NUCB1
CXCL17
ETS2
FAM110B
RNF43
LARGE2
ARHGAP27
GJB1
MEAK7
CTSE
ITGB6
SHTN1
SCGB1A1
POLR2E
GPX4
PC
MTRNR2L2
MSH3
DHFR
MMP20
PRUNE1
MINDY1
SLC41A2
WDR1
CD109
SMIM29
HMGA1
GDA
MYD88
ACAA1
MPI
CUX1
BLVRA
GNB1
CCDC71
PAX2
NKPD1
IRX4
CPLX2
SH3D19
RNF44
ENDOD1
PCGF1
LBX2
SLCO4A1
NGRN
PLA2G2E
RHOC
C19orf12
CD86
RAPGEF1
SPTBN4
BLVRB
MRPS10
ZFP36
PLEKHG2
C10orf105
MTMR11
EDEM1
TLCD4-RWDD3
TLCD4
FHL2
PEMT
UVSSA
UBTF
C1QTNF1
CCDC90B
TEX45
PEX11G
MYRF
KHK
PLAAT3
SH3D21
ZNF764
SCAF11
C1orf174
ANXA11
ZNF592
SGIP1
PRKCD
PDLIM2
ABCA10
RTL10
GNB1L
IDNK
ROMO1
USP37
CNOT9
INTS4
STAP2
MPND
TRIM55
SPG7
KIF5C
ITGA3
GAB1
RBKS
BABAM2
SFXN3
PDZD7
TJP3
PHC2
KIAA1549L
TTC31
CCDC142
TNFRSF10B
PIM3
MIIP
PLA2G7
ANKRD66
DYNC2I1
ADRA1B
SELENOP
PGLYRP2
PRMT2
PTPRF
KNL1
GUCA2A
CA9
ERBB3
PRAG1
SLCO2B1
BCL9L
KRTAP5-7
ERCC6L
CERS2
BORCS7
TINAGL1
CA13
DCLK1
TDP2
ACOT13
ID1
YARS1
S100PBP
SLC7A7
OXCT2
BRD4
SEC23A
EHD1
SGCB
APOC3
APOA1
PFKP
ARNT
DUX4
OLFML2A
NR6A1
AFF1
CLRN3
RRAS2
MAP4K5
ATL1
PTS
POLD4
ATG16L1
KIZ
USP2
KDM4B
INTS9
HMBOX1
FAM107B
PLK2
MICAL2
PCBP1
TCTEX1D4
PLK3
BTBD19
RFFL
KLKB1
TSPAN8
NR1D1
DNAJC22
CITED2
PEPD
KPNA7
MTFMT
PRKCSH
CCDC151
NPTXR
ZNF653
PRDM10
TUSC2
ZMYND10
RASSF1
CDH17
C10orf90
C11orf24
ZFP36L1
ZFAND3
IL4R
GNRH1
INSC
TOB2
PTDSS2
ANO9
DYSF
CDC14B
KIF4B
UBE2R2
CEP152
PRR3
GNL1
PGAP3
ERBB2
SECTM1
NOSTRIN
LEKR1
LGALS4
ZNF77
EEPD1
IDH1
TMEM184C
NCKAP5
PPIP5K2
TECTB
RBP2
MIA3
SF1
CBY3
CENPVL2
CENPVL1
ATE1
CFLAR
CORO1C
BRCA1
USH1G
OTOP2
AWAT1
PISD
DKK1
C2orf88
SP6
LGALS1
SLC35F6
FTH1
C2CD2
BEST1
PCYT1A
GSTM5
DRP2
ABHD12B
P4HB
ARHGDIA
TESK2
MMACHC
MBD3
MSH5
DDAH2
CLIC1
GPR137
RGPD2
RGPD1
DHRS3
NT5C
DMBX1
RNF217
MVP
UNC93B1
ALDH3B1
PPP1R37
MAD2L2
FBXO6
SERP2
NOS1AP
HCAR3
HCAR1
MARK3
SLC19A3
ELL
TAF6
MBLAC1
CNPY4
CTSO
FOXO3
TMCO1
MYOG
IL6ST
LSM1
BAG4
RBFOX2
MLEC
TOGARAM1
KLHL28
CDKN1A
NRCAM
SLC2A9
KLF3
ZNF696
SMARCD2
SNAI3
GLRX
HERC5
LIM2
C19orf84
PPP1R35
SLC7A5
PDPK1
CEMP1
EIF4E
PABPN1
DOT1L
SLC39A6
ELP2
YPEL1
TMEM82
SLC25A34
RPS3A
PHOSPHO1
RBIS
DENND1B
POR
TNFRSF1A
TLN2
NAE1
TAB2
BPHL
LRP1
SPTBN1
PLAA
IFT74
KLF6
GAL3ST1
POLRMT
FGF22
GIP
RARA
PIP5K1C
SCYL3
TMEM171
ACOX2
GUCA1B
DOCK5
RNF223
TEAD4
KMT5A
ARPIN-AP3S2
ARPIN
SH3BGRL2
CRYGS
SYT12
KLRC2
METTL7B
ABLIM1
INPP1
IGF2BP3
SLC38A10
TMEM275
SHPK
CTNS
ANXA2
CLDN4
METTL27
KATNAL2
PLIN1
PEX11A
MSLN
ARHGAP17
C5AR1
COPS4
DKK4
RCAN1
BRIX1
TRMT11
ATP1A4
SFT2D3
TMEM183A
SFTPC
RPRD2
PDXP
JUND
IQCN
SKIDA1
MLLT10
ABCG2
IL20RB
TGFBR2
KLK8
KLK7
HKDC1
GRID1
CALML4
PDGFRL
HOXA4
HOXA3
HOXA5
AHSP
FBXO46
PPP1R27
MCRIP1
IGFBP4
SBNO2
CDC6
LHFPL2
OAF
DENND1A
MAP2K3
FCHO2
SIRT2
NFKBIB
CCER2
TMEM214
NQO2
GADD45A
SGO1
AMN1
CPHXL
LIPK
SPAG8
HINT2
TANK
YAP1
SOWAHA
SQSTM1
ERI1
TAF12
MGAT4B
OCIAD2
BIRC2
RUNDC3A
CORO2B
PHETA1
SH2D5
RASSF2
TRIM2
SP1
SF3A2
PLEKHJ1
SAXO1
RRAGA
TNRC18
LOC100129484
SLF1
KIAA0825
DENND5B
IQGAP2
TES
TRIM15
TRIM10
MAST2
TTI2
FASTKD1
DCUN1D1
PANK1
MBNL2
IRAK2
PNPLA1
WDR81
TLCD2
NFKBIA
DAND5
CD2BP2
C1QTNF6
GPR171
CDC25B
LAMC2
IZUMO3
UBA5
ACAD11
RIOK3
FAM3C
TRIB3
GAPDH
H3-3B
UNK
HSD17B4
MSANTD2
ESAM
FXR1
MOB3A
IZUMO4
BAK1
CIDEC
ASB2
NFIB
PLCXD2
TEX33
HGS
ARL16
PIK3CD
UBA6
UBE2L3
PNOC
AHCY
CHD9
GPA33
TSPAN15
INTS7
DTL
FAAP100
TOX2
SDC1
ROM1
EML3
B3GAT3
PHACTR4
SNN
VTN
SEBOX
SARM1
MTRNR2L1
PIKFYVE
IFRD1
COPZ1
FAM110C
TACR2
PMVK
INSR
MID1
EPS8
TTYH3
DHRS7B
BEST3
AANAT
UBE2O
CLASP1
LRP5
HSDL1
DNAAF1
HRH2
ITGB5
EREG
CAPN2
PACSIN2
IRAG1
ABHD2
LY75-CD302
LY75
PYGL
PITPNM1
ZMYND8
SNRPF
ADI1
GCNT1
FMNL1
PPID
STRA6
ZG16B
NCOA4
DYRK1A
PRXL2A
EDN2
RNF10
COQ5
TMEM143
SYNGR4
KIAA0930
RPL23A
RAB34
PROCA1
TLCD1
PFN1
ENO3
SLC25A11
RNF167
SLC25A24
CCND2
GOLGA4
ARHGAP32
MRPS11
MRPL46
TRAPPC4
SLC37A4
RPS25
CERS4
LAMB2
ALDH3A2
STX18
SLC1A1
TRIOBP
CRK
MYO1E
MAPK7
MFAP4
DSG2
PYCARD
MLPH
PPP1CC
MLF2
WDR27
C6orf120
TREX1
SHISA5
PJA2
SEC16B
MRPS28
NFE2L1
PMEPA1
TAGLN2
KRT86
ELF5
LAMP3
LHB
CGB3
NECTIN1
TMOD1
STK24
RXRA
ZSWIM7
TTC19
KCNQ4
IL32
RBM14-RBM4
RBM14
KRT31
MXD3
RAB24
PRELID1
SOS1
TKFC
DDB1
SLC25A5
APOL4
OCIAD1
ZNF207
C17orf75
RRAGD
CARD19
SENP6
ZC3HAV1
CREBRF
PLXDC1
ZNF367
GNPDA1
HASPIN
SESTD1
TMEM101
PYY
NAGS
WDR77
ATP5PB
TMEM120A
HIPK4
NEIL1
PAF1
MED29
PLIN3
TAOK3
SUDS3
LCN12
FBXW5
C8G
SGK2
RAD18
SEMA5B
PRDX6
SELPLG
SEH1L
CRPPA
MKNK2
TRMT10B
ETNK2
DCBLD2
GFOD2
FKBP1A
ANO10
TBP
PSMB1
PRR7
NNAT
BLCAP
MRGPRF
LDHA
OXR1
PPIH
MAPK8
ATRN
HTR1D
TDRD1
CCDC186
SH3BP5L
IQSEC2
RPL10L
LAMB1
NUPR2
CHCHD2
SHFL
NAV2
BEGAIN
DUSP5
UPK3B
SLURP1
LYPD2
C16orf74
KRT8
KRT18
CIBAR2
PAQR4
KREMEN2
IBTK
AQP1
RPE65
TRIM29
SHF
ATP13A3
NET1
PPM1J
TUBAL3
DENND2B
SBF2
ADM
LMLN
IQCG
CTBP2
SEMA3B
FAM185A
LSMEM2
FUOM
PRAP1
SLC27A4
SLC25A28
TTC36
IFI35
RPL27
PLEKHG3
SRSF4
MRPL48
KRT19
TMEM120B
DLST
TMC1
SMIM19
SLC20A2
CEBPG
FLVCR2
ALDH3A1
RNF113B
ATXN7L3
CA7
STAT6
SPINT2
PVR
RMDN2
ACADM
PPP1R14A
STK33
ANKRD35
RNF141
DAPP1
MTMR4
PRKDC
MCM4
MTA2
GDPD1
NLRP3
FMN1
PPM1D
TXLNA
GPR183
NMD3
SMYD5
FRRS1
STK11IP
SPTBN2
KCTD14
ODF3L2
SHC2
CDK5R1
EPS8L3
GATAD1
RPP25L
P2RY4
IRF2BPL
TPMT
KDM1B
ADAM22
FAM78B
NRP1
UCP3
GCLC
PIH1D1
ALDH16A1
C9orf85
ABHD17B
SOX9
TBC1D22A
SPOCK2
ADGRG1
ASAP2
ANGPTL4
GLRX2
CDC73
UBC
S100Z
TMEM169
PECR
CD200R1L
ZNF395
COMT
SERINC5
AHNAK
ARTN
ARHGAP29
NUP107
SLC46A3
AGTRAP
CNOT6
KLHL29
UTP14A
TIRAP
ARHGAP12
GPD2
COL5A3
ZC3H10
RPL41
GUCA2B
SRGAP2C
SRGAP2B
MFSD3
GPT
B4GALT1
E2F2
IVD
PPP1R3G
SPHK2
DBP
TMEM141
DAD1
GLTP
NAT2
SNRPD3
GUCD1
RABGGTB
GPN2
SF3B5
RAB37
SMAGP
FGF23
SLC26A6
ARHGAP18
RGS9
ARSB
TMEM121B
SPDYE14
SPDYE10P
CASTOR2
AQP3
CELA2A
HPCAL1
CMPK1
POT1
CYP26B1
SIRT7
CCDC200
MAFG