ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748426 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◣ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

KDM6B
MAMDC2
SCRT2
KNL1
ISG15
HES4
SKIV2L
NELFE
MTRNR2L8
NDUFS1
EEF1B2
KIF5C
MTRNR2L2
MSH3
DHFR
CCDC71
MIA2
PADI3
PHF12
NEK2
NSMCE1
CRYBG2
RGPD2
RGPD1
DNAJC25-GNG10
DNAJC25
DUX4
ACSL5
UQCRHL
WDR36
PLOD1
KIAA2013
ZFP36
PLEKHG2
ERICH3
SPTBN4
MTRNR2L1
ZSWIM3
ACOT8
SPON1
WDR74
STX5
MORC1
B3GLCT
SEPTIN4
CSTF1
AURKA
SNRPA
C19orf54
IGFBP4
SLC3A2
EXOC1
SPHK2
DBP
SFRP5
POLR2E
GPX4
LMTK3
ART1
CCDC200
LASP1
SH3D21
PPIP5K2
CCL20
SFTPC
SLC41A2
NR1I3
SIAH2
RPS3A
LSM1
BAG4
LOC100509620
FAM169A
MPI
RHOC
PRKCSH
CCDC151
POLDIP3
MIDEAS
LOC390877
GTF2F1
CHST11
MYC
CXCL17
TRIM48
INAVA
CPLX2
PTPRF
PCGF1
LBX2
PRKAG2
PRR3
GNL1
RPL34
OCIAD2
MRPL24
HDGF
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
ERBB3
SOWAHA
NDRG1
FUT5
PPEF2
MTMR11
SMG8
NCS1
ATP5MC3
SH3D19
RAB5C
ADAM22
SASH1
ZBED9
DPAGT1
C2CD2L
URGCP-MRPS24
URGCP
ARNT
CAMK2N1
CCNI
KDM3A
ABLIM1
PAX2
MTFMT
GNB1
TRIM2
RAPGEF1
CAB39
TTC31
CCDC142
TAOK3
SUDS3
YARS1
S100PBP
C11orf49
B3GNT3
HMOX1
YPEL1
PLAUR
GSTA3
BRD4
PTK7
NLRX1
PHC2
FAM110B
TPD52
PCBP1
ZC3H10
RPL41
SLC7A5
UBE2R2
CDH17
MRPS10
RBBP5
BCL9L
SEC24D
PJA2
SCARB1
S100A16
S100A14
SLC27A5
LENG8
RABGGTB
STAT6
ZNF696
TESK2
MMACHC
MUC3A
NKPD1
LOC102724770
DGCR6
LIPK
CARM1
PHACTR4
CERS4
MVP
BORCS7
VAC14
WSB2
RTBDN
MAST1
PPP5D1
CALM3
CSF1R
UROS
BCCIP
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
PSMA5
IRF2BP2
TINAGL1
IFI35
RPL27
NR2F2
PRDM10
PRKCI
PPP2CB
CD2BP2
CD86
SELENOI
ADGRF3
CUX1
PYCARD
RIPK4
CAMK2G
CSNK1A1
CRYGS
MTRNR2L9
IGF2BP3
ATXN7L1
SFXN3
PDZD7
SGIP1
PAF1
MED29
C19orf33
COX16
RAB17
MYRF
CCDC90B
TSPAN1
PIK3R3
P3R3URF-PIK3R3
P3R3URF
FHL2
PTP4A1
NMD3
TSC22D1
TJP3
CCND2
OXCT2
NUPR2
CHCHD2
RNF121
LOC100133315
SLCO4A1
SERINC2
ARHGEF39
SIT1
CCDC107
ADAMTS14
IL6ST
MLF2
TMEM71
PHF20L1
KCNMB4
PRR15L
GNAZ
SLC25A5
POLR1E
NRCAM
PARP14
TNS3
FBXO46
U2SURP
MLEC
IL20RB
ZNF564
PHF14
ABHD2
TMEM169
PECR
SMAD3
ZC3H12D
NIBAN2
RAD51AP1
C12orf4
EIF4A2
GALE
TNFRSF1A
USP37
CNOT9
TMED4
DDX56
GPA33
RAD50
ZFP36L1
JUND
IQCN
HOXA4
HOXA3
HOXA5
C1QTNF1
VPS26B
NCAPD3
CREB3L3
IGSF23
KRTAP5-7
TNFAIP8L2-SCNM1
TNFAIP8L2
NCKAP5
SCNM1
LYSMD1
PLA2G7
ANKRD66
SAXO2
EFL1
PRKCD
EHD1
BCAR3
KPNA7
TRIP12
FBXO36
MAP4K5
ATL1
IDH1
SCP2
PWP1
SAMD1
C19orf67
LCN12
FBXW5
C8G
ZFYVE28
VPS54
ROCK2
LIM2
C19orf84
TREX1
SHISA5
ALDH3A2
ATRN
ATP13A3
TM4SF1
ANK2
PIH1D1
ALDH16A1
METTL24
LUC7L2
FMC1-LUC7L2
FMC1
GIMAP5
COMTD1
TEX45
PEX11G
CTSO
PRAG1
BLVRB
ARID1A
FIBCD1
GPANK1
CSNK2B
C6orf47
APOM
ARPIN-AP3S2
ARPIN
LY6G5B
IRAG1
GRAMD2B
RDH5
ITGA7
CD63
BLOC1S1
USP2
EAPP
CITED2
OSBPL3
BORCS6
CHMP4B
NEK6
DIDO1
PAQR4
KREMEN2
ARL14
TKFC
DDB1
RBFOX2
CYP2C18
MSL1
HGS
ARL16
MGST2
FCHO2
CPHXL
ALG14
RCAN1
EPOP
SLC27A4
CSDC2
RSPH10B2
RSPH10B
ITPK1
SERINC5
ACAA2
MBD3
METTL7B
ZFAND3
CTSE
RFX2
PLA2G4C
CEP250
DKK1
SCAF11
TMCO1
LGALS4
CORO1C
MYO1E
KATNB1
RPS26
SLC20A1
RNGTT
NPTN
PFKP
ADGRB1
SLC9A3R1
RGS3
FAM107B
KMT5A
KIZ
SNTB2
TRIP10
GPR108
SP1
ZNF592
PPP1R9B
ACTG1
ROMO1
ZMYND8
SPAAR
HRCT1
RPL18
RNF114
CERS2
EIF1AD
CST6
BANF1
NOS1AP
RARA
WDR1
GBA
PARP16
MDM4
ITGA3
ADPRHL1
LIMK2
PDPK1
CEMP1
ZBTB8OS
RBBP4
PISD
GALK2
COPS2
TDP2
ACOT13
RNF43
SPAG8
HINT2
TTI2
CLASP1
VWCE
LAMP3
CASTOR1
SWSAP1
EPOR
ZNF827
PAK4
RPS6KA1
GNAL
CHMP1B
RAB11A
SMARCD2
SH2D5
PGAP3
ERBB2
POLD4
PPP1R37
ZNF165
OR1F12
AHSP
BBC3
EPS8L2
DEAF1
NR1D1
PLXDC1
GAB1
TOB2
ACHE
RNF5
AGPAT1
UFSP1
SEPSECS
PLAAT3
ZG16B
PRX
SERTAD1
PYGL
GPR137
PLK2
GRID1
ACADM
PITX3
GBF1
TAF12
ADI1
GTF3A
NRP1
SLC38A3
GNAT1
TRUB2
COQ4
GLRX2
CDC73
KLK6
SPINT2
PPP1R14A
WNT7B
PDXP
PAOX
ECHS1
SELENOP
PKP4
CCDC148
VIL1
HNF1A
HAAO
CNNM3
RBKS
BABAM2
VTN
SEBOX
SARM1
ORC2
PSMD1
PKDCC
LRRC1
SLC7A7
SEC13
SLCO2B1
PINK1
SIRT7
TACR2
GET1
AGPAT2
NUMB
NPB
PANK1
TATDN3
NSL1
PCNX3
MAP3K11
ZMIZ1
PCYT2
GPR35
DOCK6
ZBTB48
MACC1
KIF21A
GPR171
CDK3
SMPDL3A
PABPN1
MMADHC
ZSWIM1
SPATA25
NEURL2
CTSA
HADHB
HADHA
CLIP2
IST1
ACOX2
ARHGAP27
LHPP
ATE1
PHETA1
USP18
PHLDB3
ZNF567
GGT1
NRL
DCAF11
AHCY
MAD2L2
FBXO6
AFF1
CCN2
FGFR3
ACY3
GUCA1B
GCLC
CDC14B
SULT2B1
LY75-CD302
LY75
SEC23A
EPS8L3
AP1M1
SLC19A3
AGMAT
SRCIN1
DNAJC22
TULP2
NUCB1
CARHSP1
CSNK1D
TP53I13
ABHD15
NQO2
F11R
RAB37
EDEM1
EPS8
VHLL
TMEM79
SMG5
GLMP
CNDP1
LOC102723996
ICOSLG
APOC3
AKR1A1
VAMP8
VAMP5
SDC1
HNMT
SLC35D2
GPRC5C
PRUNE1
MINDY1
PLEKHG6
IDNK
SNRPD3
GUCD1
DENND2B
BRMS1
B4GAT1
NOMO3
ABCC6
NCOA4
TRIB3
APOA1
DHRS3
RHEX
FN3K
DOCK5
CDR2
SRSF11
LRRC40
CYP17A1
PDF
AJUBA
F10
BPHL
TRIM15
TRIM10
COLCA2
WEE1
C2orf88
AHSG
TPCN2
COPS4
ZNF219
TMEM253
PUS10
PEX13
CDHR2
MYD88
ACAA1
INPP1
ASS1
SYBU
GSE1
NUDC
NR0B2
ID1
FBXO31
PPIL2
TIGD3
GDF7
AQP11
DENND5B
CERK
APOB
FTH1
CFLAR
SUCLA2
SDCBP2
CCL16
GLRX
SPATA2
PLXNB2
TMEM177
GTF2I
STK24
TRAF7
RAB26
TTYH3
XYLB
HDHD3
NQO1
COL21A1
COMT
TNRC18
LOC100129484
PET117
KAT14
CA9
PDLIM2
LAMB1
CBSL
CBS
CPNE5
WFDC9
WFDC10A
ANKS4B
SLC45A4
BCAR1
POR
AFP
GDI2
KRTAP5-6
TDRD7
LARP1
PAAF1
DAND5
COA4
TCIRG1
NDUFS8
LURAP1L
GAL3ST2
MRPL2
KLC4
CUL7
TK1
AFMID
PER2
NDUFA6
MYO18A
FNDC11
TCP10L
SMARCD1
ASIC1
KIF1C
INCA1
BLOC1S5
CTDSP1
PTK6
MMP24OS
MMP24-AS1-EDEM2
FAM83C
EIF6
LIPE
ATP7B
ALG11
RAB5IF
PTDSS2
KLHDC2
ANO9
AGXT
UBR4
TMBIM1
APOA4
GPR142
ALOX12B
PERP
MLXIPL
VPS25
BRCA1
IQANK1
FAM83H
CBY3
PTK2B
MIDN
WNK4
REG4
ABCC3
SH3GL1
ADAP1
HGD
GDF15
FYB2
MAN2C1
GJB1
AGT
IQGAP2
IL32
RNF44
CFB
NID1
SMIM19
SLC20A2
CYB5R3
ATP5MGL
NOMO1
ZNF232
USP6
PLEKHB2
FAM168B
C1orf210
WAS
PPP1R27
MCRIP1
PTPRN2
CXADR
SRMS
TBC1D22A
SECTM1
GSDMD
KDELR2
IFNGR1
FUOM
GAL3ST1
SOS1
HIC2
NEK4
ITIH1
MGAT1
C11orf24
RAPGEF4
ZNF764
TAS2R19
SPG7
LIME1
GNG4
MBNL2
RAB43
MSH5
DDAH2
CLIC1
LRP1
HSPE1-MOB4
HSPE1
HSPD1
GAPDH
TRIM47
CPNE7
PON2
FASTKD1
PALM3
CPPED1
DNAAF2
DOK4
PDE11A
G6PC
SEPTIN9
FITM2
ALKBH7
LYRM7
HINT1
PSPN
ITGB2
MAN1A1
TSPAN8
PABPC4
MOV10L1
SPPL2B
LSM7
PEPD
IL1R1
C1GALT1
SERPINF2
APOL6
ZSCAN2
PROCR
NHSL1
COL5A3
LPP
C1orf174
PPP4C
GLYCTK
UCKL1
RUVBL1
C9orf64
IRF2BPL
CBARP
ATP5F1D
LTV1
BCL2A1
SDR9C7
PRAP1
DENND10
NFATC3
CDKN2AIP
H4C3
H1-6
RAMP1
TRIM14
WDR81
TLCD2
GIP
PRSS8
LRRC20
F7
COL13A1
DKK4
SLC2A9
TECTB
OPA3
TNFSF15
ELL
ATP6V0A1
CMC1
MRPL20
CCNL2
MICAL2
PEMT
SLURP2
EEFSEC
SPOCK2
H6PD
ENDOD1
SF3A2
PLEKHJ1
C11orf86
SMAGP
NEU4
DNMT3A
MOGAT3
MBL2
EPHX2
MIA3
ADGRG1
FGG
HSD17B11
ZNF184
EGLN1
TADA1
ABCD3
DMAP1
TANK
OPTN
KIFC3
CCDC3
ANXA9
ZFAND2A
GNA11
SH3YL1
ACP1
TNFRSF10B
SH3BGRL2
NOL4L
TRAF4
C3
RNF126
GLI1
INHBE
MESP2
QPRT
UBA6
PLIN3
PRXL2A
TRIM26
KHNYN
CBLN3
HAGH
FAHD1
UBA5
DSP
ACAD11
AKAP1
MMP15
EFNA2
CDX2
C12orf43
TM4SF5
TCAF1
STX16
SCN9A
MRPL33
VEGFA
TMEM270
HJV
NCR3LG1
SMYD5
FMN1
PRMT1
IRF3
BCL2L12
SPTSSA
MTA3
HCAR3
HCAR1
SIN3A
CAPN3
SEC16B
TMEM150B
KHK
APOBEC3A_B
APOBEC3A
MMP20
FKBP7
ZNF541
CRK
MTIF2
DNAJB3
RUNX1
ATXN7
ZNF710
NHLRC4
ZNF362
CCL14
NET1
NNAT
BLCAP
IL4R