ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026268 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◣ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

PAOX
ECHS1
SLCO4A1
PHF12
WFDC9
WFDC10A
SPTBN4
PLAUR
SLC7A7
TPCN2
CNNM3
SPON1
CSTF1
AURKA
CEBPG
PLEKHG6
PPP5D1
CALM3
MIA2
RAB5IF
ZBTB46
PDXP
CERS2
EDN3
MVP
SELENOP
FUOM
PRAP1
LHPP
GPR171
PKP4
CCDC148
CCDC71
NSMCE1
LENG8
HNF1A
KRTAP5-7
ISG15
HES4
SLCO2B1
IL6ST
SOWAHA
ZFP36
PLEKHG2
MYRF
PHLDB3
VIL1
CDR2
GSE1
OPTN
CCDC3
SCAF11
FBXO31
PANK1
RPS7
RHOC
COMTD1
ASS1
DIDO1
POLD4
ZBTB48
ZNF432
MORC1
FAM107B
C11orf24
TNFSF15
TSC22D1
GGT1
CPLX2
RAPGEF1
ERBB3
LGALS4
DOCK6
ACY3
TULP4
TACR2
PTP4A1
ATE1
CYP17A1
PLIN3
DMAP1
LASP1
UQCRHL
SLC9A3R1
SPHK2
DBP
KDELR2
PCGF1
LBX2
GIMAP4
SPINT2
CLPB
EPS8L2
DEAF1
CLRN3
PDF
C2orf88
VTN
SEBOX
SARM1
CLIP2
RNPEP
LYRM7
HINT1
ZMIZ1
SPATA2
URGCP-MRPS24
URGCP
GTF2I
SLC20A1
MMP24OS
MMP24-AS1-EDEM2
FAM83C
EIF6
SIRT7
NPB
PCYT2
CDH17
ACSF3
NMD3
PKDCC
APOC3
APOA1
APOA4
PHETA1
TNFAIP8L2-SCNM1
TNFAIP8L2
SCNM1
LYSMD1
RNF214
PCSK7
TMOD4
ZNF567
PRKAG2
PAK1
CDHR2
RNF44
SMARCD1
ASIC1
SLC35D2
CXCL17
FN3K
LIPE
CACNB2
IYD
GPR35
MMADHC
PPIAL4H
PPIAL4G
CCDC90B
PRR15L
ADI1
GUCA1B
CARM1
RAB37
TMEM150B
SMPDL3A
COL5A3
TMEM262
LTV1
ABR
RAB8A
GPA33
DENND10
NUDT13
TCIRG1
NDUFS8
AGPAT2
SLC3A2
DENND2B
IL20RB
ADAP1
LRRC1
TECTB
PRELID3B
NUMB
F10
GIMAP5
FITM2
HMOX1
SEC13
INAVA
H3-3B
UNK
USP2
TREX1
SHISA5
STARD4
DGAT1
SMIM24
CDK5RAP1
CSF1R
ATP6V0A1
ANKRD40CL
PSMD1
MIDEAS
RPL18
KCNE3
GPR142
BRMS1
B4GAT1
BCAT1
NR1I3
KIF1C
INCA1
ABLIM1
PPIAL4C
PPIAL4A
CCN2
ZNF541
ID1
WEE1
IRF2BP2
TAS2R19
NRCAM
SLC45A4
ZNF488
FGFR3
ANK2
ZSCAN2
SPOCK2
GSTP1
TBC1D22A
CDKN3
FEM1C
COL13A1
PAF1
MED29
CFAP65
ARHGAP35
AP2S1
NBR1
AQP11
F7
NEK2
SPDYE14
SPDYE10P
KIF21A
RAB6D
TMEM115
NPRL2
CYB561D2
INPP1
SFXN3
PDZD7
THUMPD3
DNAJC25-GNG10
DNAJC25
BORCS7
ACOT2
HEATR4
PON2
IL32
PPIAL4F
PPIAL4E
PPIAL4D
EPCAM
TULP2
NUCB1
SMAGP
ZNF225
FGG
PEPD
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
HDHD3
TSPAN8
SYNPO
CDX2
LGALS2
EIF4EBP2
TESK2
MMACHC
ATP9A
ATF7IP
PLXNC1
TMEM169
PECR
KDM2A
TAF6
MBLAC1
CNPY4
C19orf33
PTDSS2
ANO9
SERINC5
TEP1
CIDEC
LIPK
RBKS
BABAM2
SMIM35
TMPRSS4
TNIP1
CES3
HKDC1
EHD1
DIP2C-AS1
LOC390877
GTF2F1
GRID1
LRRC29
F11R
LSM14B
MAN1A1
ACOT7
NOSTRIN
ZNF302
IL1R1
CDC14B
RHOQ
ATP6V1E2
TUBA3E
SDHAF1
SLC6A19
KCNJ15
NRXN2
ACOX2
BNIP5
CREB3L3
PGF
TATDN3
NSL1
FCHO2
GGT7
ACSS2
TP53I13
ABHD15
SNRPA
C19orf54
FDX1
LAMB1
CRYBA4
PRDM10
ADRA1D
NUDC
NR0B2
AGT
GAL3ST1
PRSS8
CAMKV
BTNL8
KRTAP5-11
PABPN1
PTBP3
LY75-CD302
LY75
SOS1
VWCE
NET1
MYADM
KCNN3
FRRS1
GDF7
TMBIM1
KHNYN
CBLN3
NLRP2B
EFCAB13
MAD2L2
FBXO6
CFLAR
PTPRF
GALE
DSCAML1
SLC17A9
CAMK2G
MRPL2
KLC4
CUL7
CWC25
TRIM26
IDH1
HNRNPL
EPS8L3
DLGAP4
NQO1
PICALM
AMBRA1
APOB
MESP2
ZNF529
WDR36
IL17RE
POLR2E
GPX4
JOSD1
PGAP3
ERBB2
SULT2B1
NCKAP5
GREM1
EMP1
PINK1
HNMT
NOL4L
TUBA3D
HAAO
KIF5B
BANP
HIPK4
TMEM41A
SF3A2
PLEKHJ1
AMH
CASTOR2
TCEA2
TPT1
THRA
SAR1B
OVOL1
AP5B1
APOL4
TFPT
PRPF31
CTU1
ZC3H4
SECTM1
MEP1A
NCOA4
ELAVL3
WAS
KHK
CDC42EP4
OST4
EMILIN1
RIPK4
CEACAM18
PHB
ACHE
EDEM1
HGD
DNAAF2
CNIH1
AHSG
DOCK5
CCL16
TSPAN3
TSNAXIP1
METTL15
KIF18A
RANBP10
SMAD3
ARHGAP27
GNA11
MVB12B
TECR
DNAJB1
SIN3A
PDE4DIP
HEXIM2
WSB2
CXADR
GNG4
SH3GL1
NDUFS3
KBTBD4
FAM180B
ATXN7L1
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
NDST1
GSDMB
ENDOD1
IGF2BP3
ABCC3
MGAM2
CLN6
CNDP1
MBL2
CD244
OCIAD2
RBBP8NL
RAB17
BRCA1
FASTKD1
ANK3
FEZ2
CERK
CDCA3
ZSWIM1
SPATA25
NEURL2
CTSA
SNRPD3
GUCD1
PET117
KAT14
TFEB
PGC
PRODH
LOC102724788
CGN
DELE1
HIC2
RASSF4
C19orf81
SPRYD7
TEAD4
CDK5RAP3
ATOX1
OR6V1
VAMP8
VAMP5
TEX45
PEX11G
H3C7
H2BC9
LGR6
LRRC20
ERICH3
ADGRG1
CNKSR3
TRAPPC4
SLC37A4
RPS25
DEFB131A
KRT79
SLC19A3
AJUBA
SLC46A1
FAM3C
EPS8
TPD52
PHOSPHO1
REG4
AP1B1
EPAS1
TM4SF1
TAF4
VPS25
WNK4
TMEM127
CIAO1
NODAL
H4C3
H1-6
TCAF1
ZNF165
OR1F12
ALPI
DNAJC22
ST3GAL6
BCAR1
MYO18A
SPSB1
STX16
ZNF592
C1orf53
GTPBP4
NNMT
NDUFA6
PDZK1IP1
SEC16B
TMEM37
BCL9L
ARHGEF39
METTL7B
CA9
MACC1
CDK3
AFF1
PSME3IP1
RSPRY1
JMJD1C
LRRC43
IL31
MRPL44
PITPNM1
DHX35
SOCS5
PRUNE1
MINDY1
TRAF4
KCTD17
KCTD15
SMG8
DYNC1I2
PLA2G4C
MRI1
C19orf53
TMEM140
ZNF112
MICAL2
SMCO4
KLHDC2
CYB5R3
ATP5MGL
WDR46
RGL2
PFDN6
ORC2
MRGPRF
DHRS11
WNK1
MRM1
KNL1
NFATC3
ADAMTS14
NAA80
IFRD2
HYAL3
REPS1
PABPC4
MMP15
OTULIN
SLC6A4
PTCD1
CPSF4
NTF3
PRKCD
NNAT
BLCAP
AKR1C4
EPN1
ACTB
ZNF223
MYD88
ACAA1
APOL6
SEH1L
C5orf15
PPP1R27
MCRIP1
UQCRC1
TMEM89
C1orf74
TMEM176B
TMEM176A
ZNF641
SSTR1
IFNGR1
CEACAM16
CSNK1D
GAPDH
UMPS
NPY4R
NPY4R2
PCNX3
MAP3K11
SH3BGRL2
XPNPEP1
METTL24
GUCY2C
RHEX
ZFYVE27
FGF3
FAM160A2
CNGA4
AHCY
PDLIM2
MOV10L1
OR9Q2
MANBAL
APOBEC1
GALNT11
RBMS1
PLEKHG5
HEPACAM
PPEF2
FZD5
COL8A1
MOGAT3
PLXNB2
FNDC11
PTK6
SRMS
HAGH
FAHD1
DNAH7
GPRC5C
ZNF91
BOD1
SLC6A7
THAP9
SEC31A
SRCIN1
MRPL24
HDGF
INVS
ERP44
ANKS4B
MRPL20
CCNL2
DYNC2I1
ZBED1
DHRSX
FLRT2
UBALD2
KBTBD6
C20orf204
PTK2B
ZBED9
ZFP36L1
EGF
LAG3
CD4
DHRS3
PROCR
EML1
PFKP
MYEOV
ABCB6
SGCA
CCDC146
SLC12A3
AFP
MBNL2
ECI1
NR1D1
CLDN4
TMEM45B
OR6C68
RSBN1L
SLC2A8
FTH1
MYO1A
HSD17B11
SPTSSA
CCR1
SKP2
LMBRD2
MYOM1
ZNF226
PRKG1
GLI1
INHBE
MAPKAPK2
RAB40B
DDX23
TSPAN32
C11orf21
AKR1A1
NEK7
SLC22A9
SV2A
BOLA1
STK31
REEP6
PCSK4
DOCK9
COX7C
PRSS56
CHRND
FAM110B
CORO1C
PCDH1
CARD16
ACSS1
CASP1
FLCN
AGMAT
HJV
TRIP4
PCLAF
CNTN4
SLC39A14
CHMP4B
NT5DC4
ZNF512B
MUC13
DCP1A
RBM24
ITIH2
MED15
ACVRL1
CNOT1
RDH5
ITGA7
CD63
BLOC1S1
ZNF230
EIF3F
CRYBG2
RBP5
CLSTN3
ODC1
SEC24A
NME4
DECR2
GRIP2
COLCA2
LIME1
MUS81
CFL1
ADCY6
GLO1
OPA3
KDM6B
DOK4
TACO1
MGAM
PAAF1
COA4
STAT6
EFNA2
SERTAD2
ITPKC
COQ8B
FAM174C
SOWAHC
CEMP1
AMDHD2
RAMP1
SPRED2
AMACR
SUCLA2
PHF21A
HNF4A
TMEM254
TEX101
AXL
DSTYK
GCLC
WT1
MGAT5
ZFAND2A
H1-0
GCAT
PSKH1
NRN1L
H4C7
H4C6
H1-3
IST1
FABP1
DNASE1
PUS10
PEX13
TDP2
ACOT13
TTC31
CCDC142
MYBL2
VILL
PEX14
DFFA
VHLL
TMEM79
SMG5
GLMP
RHOF
CCND2
TMPRSS9
TMTC3
CEP290
PPRC1
OR5B12
TBCCD1
DNAJB11
FAM167A
XYLB
TDRD7
EPHX2
CHRNA2
PDS5A
GDPD3
MAPK3
SEMA4C
ANKRD39
VIPR1
PMVK
PDE4D
SEC23A
FAM20A
ALDH5A1
RINL
WDR81
TLCD2
CORO2A
GATA3
SH3D19
IRF2BPL
SLC12A9
EPHB4
FOS
HEXB
RELL1
COX16
HSPG2
SLC47A1
RBBP5
HTR3B
FAM149B1
ECD
PDPK1
ATXN1
IER5
FOXP1
IL1A
SLC51B
SPPL2B
LSM7
GATAD1
USH1C
OTOG
ZNRF1
WDR59
AHCYL2
RAG2
IFTAP
PGAM2
PLK2
AIFM2
PDGFRB
CDX1
RPL34
SPRY4
BMS1
WDR74
STX5
WDR5
ZNF155
TMEM181
ELF3
APOD
CLIC5
MGST2
CYCS
RAB11FIP4
DCAF8L1
ZBTB7B
ATP8B1
TMEM139
CASP2
ESRRA
CATSPERZ
PIM3
TFEC
ZBED2
TNS3
PPIP5K2
GFM1
PPP1R14A
GHITM
TTYH3
AGPAT3
MXI1
SPIB
TNFRSF10B
PACSIN3
TUBAL3
FAM168A
POR
RNF126
FSTL3
GPR137
EDEM2
ITPR1
PACC1
PRKCSH
CCDC151
DDC
SULT1B1
MSRB2
TM9SF4
STK24
LRIG3
TRANK1
ARHGDIB
SYBU
TM4SF5
NAPEPLD
TSPAN18
RAPGEF4
SLC27A3
TUFT1
MTMR4
NDUFC2-KCTD14
NDUFC2
GNAZ
TCP10L
SERP2
FGF19
CAPN3
MTIF2
RASA4
MLF2
TRAF5
S100Z
TEX52
TMEM101
GAS2
CABLES2
SPA17
SIAE
KIAA1522
LOC644090
SMPD3
LPP
APOBEC3A_B
APOBEC3A
PNOC
POLDIP3
NUP107