ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX361882 | LoVo
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◣ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

TMEM177
PAOX
ECHS1
PPIL2
ORC2
ALOX12B
MAMDC2
SLC35A3
KIF21A
ATXN7L1
HNF1A
ERBB3
ISG15
HES4
UQCRHL
MIA2
SLC7A7
GSTK1
ADCY6
GPR35
RELB
OR9Q2
TNS3
RAMP1
ALDH2
AFF1
SELENOP
ETFA
TACR2
LURAP1L
CDC14B
PRKCSH
CCDC151
ZFAND3
INAVA
CCDC90B
GPA33
PRSS3
TMEM45B
HMGCS1
CLIP2
PTPRN2
NOP9
LTB4R
LTB4R2
DHRS1
CIDEB
EPS8
YEATS4
RASA4
SKIV2L
NELFE
IST1
NADK2
STK24
MAIP1
MYRF
DNAJC22
LOC102724770
DGCR6
TREX1
SHISA5
VIPR1
PCNX3
MAP3K11
RMDN3
GCHFR
C15orf62
KNL1
DENND5B
RBKS
BABAM2
PHACTR4
PGAP3
ERBB2
PNMT
DNAJC25-GNG10
DNAJC25
TSPAN3
PCGF1
LBX2
AQP11
SP1
RPS5
VIL1
SMAGP
NPTN
FMN1
DYRK2
CBX4
MYO1A
COLCA2
MYL12B
MYL12A
TATDN3
NSL1
ZNF384
TNRC18
LOC100129484
RAB17
BIRC2
NSMCE1
MICAL2
ART1
ATE1
TTC31
CCDC142
C9orf64
MRPL53
SPPL2B
LSM7
PAK4
GAB2
RAB43
RASA4B
ADAP1
MAN2C1
IRF2BP2
MNAT1
LTV1
MARK2
CNNM3
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
SPON1
MAGI3
KLHL8
EPS8L2
DEAF1
COL8A1
ZNF564
LAMTOR5
LRRC1
GGT1
TCAF1
ACY3
CAB39
BNIP5
INTS8
PHETA1
TNIP2
PTPA
CRAT
OSBP
S100Z
MMP24OS
MMP24-AS1-EDEM2
FAM83C
EIF6
SPINT2
CAPN3
TMCO1
CLRN3
KIAA0100
SLCO2B1
TNFRSF1A
CPPED1
ITPK1
METTL7B
COL23A1
TYMP
SCO2
ODF3B
TESK2
MMACHC
REG4
DUX4
ATXN2
ZNF385B
RAD54L
OR4N4
BAIAP2L2
POLRMT
FGF22
ZSWIM1
SPATA25
NEURL2
CTSA
AGMAT
CCL20
HSD17B11
CCDC71
WDR97
MAF1
CYC1
KDM6B
DOCK6
CYB5R3
ATP5MGL
CACNB2
TECR
DNAJB1
GOLPH3
RAB37
PRR15L
PAAF1
COA4
CDK5RAP3
TPCN1
ZMIZ1
SEC16B
HPS6
ARMH3
HOXA4
HOXA3
KLHDC8A
LRIG3
FAM131B
WDFY2
COBL
HEPH
PKDCC
ARHGAP27
CCN2
BRMS1
B4GAT1
LTBP1
SULT2B1
ZNF827
C1GALT1
METTL8
DCAF17
LINS1
ASB7
GIPC2
PAK1
BTNL8
MAP4K5
ATL1
SYBU
LIMK2
DMXL2
C1QTNF1
CXADR
FNIP1
LARP1
EPS8L3
PER2
ASAP2
C1orf210
CRYBG2
PCDH1
PRKG2
PHC2
HOXC10
CDC34
HOXC11
TAS2R19
TPMT
KDM1B
MLEC
SLC17A5
SPTBN4
MTA3
KCTD17
CLDN7
ELP5
CTDNEP1
BCL3
AEN
PTGDR2
CTCFL
KRTAP5-7
RUNX1
GNA11
MBNL2
TMPRSS9
PERP
PHRF1
ZNF408
ARHGAP1
ZNF219
TMEM253
CPNE5
SUPT7L
SLC4A1AP
RAPGEF1
ABLIM1
PLEKHG5
CDK3
CDH17
THBS4
MTX3
MPV17L2
NCR3LG1
RNF10
COQ5
LSM5
AVL9
XPR1
PPIP5K1
CKMT1B
NUDCD1
HNF4A
GRTP1
ADD3
TFDP2
TNFSF15
TSEN2
PPP4C
TANK
LARGE2
ISCA1
PEX16
C3orf85
SLCO4A1
CDKN2AIP
UBC
LMO7
C1orf174
ABCB1
TSPAN14
TP53I3
SF3B6
FAM228B
SGCB
KLHL31
NUMB
FOXJ3
PLAUR
PROCR
MIDEAS
CAMK2G
PTK2B
RNF126
FSTL3
PDZK1IP1
IRX4
TRIM35
NDUFA6
CLDN4
LRP6
SOS1
GDA
SPATS2L
DTX2
KDM3A
CSNK1D
SRSF11
LRRC40
L3HYPDH
JKAMP
RHOC
IL20RB
C2orf88
PPM1J
TRIM15
TRIM10
KALRN
MTRNR2L2
MSH3
DHFR
RSBN1L
XPC
LSM3
CTXN3
WDR38
RPL35
ARPC5L
HSPE1-MOB4
HSPE1
HSPD1
TEX45
PEX11G
MYO7B
IWS1
GOLM2
KLHDC2
FGFR3
PDGFB
TMIGD1
NR1D1
CD2BP2
AGPAT2
PRUNE1
MINDY1
SCARB1
UQCRC1
TMEM89
AGBL3
SENP1
PFKM
PKP2
UHRF1BP1L
KRT19
KRT15
PINK1
SMAD3
IGF2BP2
CENPS-CORT
CENPS
TCF12
MGST2
IDH1
IGF2BP3
VTA1
NMBR
ANKRD40CL
CHN2
PTBP1
DST
EHD1
UROC1
CHST13
DCAF8L1
TRIM63
SEMA6D
PDXP
IGSF23
AJUBA
ZNF764
CSNK1A1
SASH1
TMEM54
TNPO3
DNAAF2
CALM2
PKP4
CCDC148
ANK3
TOR1B
PHF7
BAP1
CXCL2
SEMA3C
PRKAG2
GAL3ST1
OPA3
SMYD5
CREB1
MRPL40
HIRA
TPRG1L
HADHB
HADHA
FTH1
HGD
PICALM
MIIP
TMBIM1
ZFP36
PLEKHG2
HAUS4
FAM107B
GSTA3
TIA1
PCYOX1
PLEKHG1
ARNTL
ZDHHC3
EXOSC7
DGKZ
PSMA5
MOGAT3
GALNT11
TM4SF5
SDHAF1
TPD52
TTI1
RPRD1B
FGF3
MROH6
NAPRT
TSPAN8
SMIM35
TMPRSS4
FGF9
MEGF9
CDR2
GNAL
CHMP1B
DOLPP1
MICALCL
ASB4
SLC16A14
TLX1
RASGEF1B
INPP1
PGF
WT1
PSME3IP1
RSPRY1
LRRC4B
MMADHC
PIWIL1
ARL14
PET117
KAT14
ZADH2
TSHZ1
NBPF15
GTF2IRD2
SFRP4
EPDR1
TM4SF1
RBIS
CD36
VANGL1
SPRY2
NDUFS1
EEF1B2
WSB2
HDHD3
SLC1A1
NAPEPLD
VASP
PKD1L1
TRIM48
ABR
DTX4
TMPRSS2
ENGASE
ARL4D
ZNF687
TCAF2
PEPD
CCDC200
PRELID3B
USF3
MORC1
PEF1
PROS1
ARL13B
SECISBP2
CKS2
PFDN5
MYG1
PPP5D1
CALM3
AHCY
ZC3H4
TINAGL1
TES
FITM2
SDSL
MGAT5
ATP5IF1
YAE1
TSC22D1
POLD4
TJP3
NHSL1
UBA5
ACAD11
TMEM150A
RNF181
USP39
C2orf68
FEM1A
TMEM143
SYNGR4
MPP5
URGCP-MRPS24
URGCP
ZNF214
NLRP14
C4BPB
SEC23A
OCIAD2
SEPSECS
AMN
CRPPA
CSTF1
AURKA
CDCA3
AHCYL2
NPNT
MIEN1
GRB7
SPTBN2
METTL25
CCDC59
PPM1D
PDE8A
HDAC7
PPP2CB
FRG2C
ZNF775
RAD51AP1
C12orf4
REPIN1
TLE3
C12orf43
TMEM141
VPS41
PTP4A1
SOWAHA
SLC35D1
ASAH2
PITX3
GBF1
PITPNM3
EIF2AK2
CARHSP1
SDC1
SLC46A3
GDPGP1
CIB1
JPH2
RIPK4
CLASP1
RAB5C
WDR54
C2orf81
CLIC5
CASKIN1
PGP
BRICD5
SUCLA2
SSTR1
CPNE8
SEL1L3
ERF
PLAAT3
ITGB5
NEK2
CSF1R
SPOCK2
ZNF768
ZNF747
AK3
PYM1
DGKA
HMOX1
BCL9L
RAPGEF4
RBM33
TRAF5
RPS26
LRP2
FOXL3
MNX1
PSMD1
PRKCD
LIPH
MDM2
B3GLCT
DOCK5
NADK
CRYBA4
ECM2
MUC13
SMPDL3A
CDHR2
RNF44
NFIB
GLI4
HSD17B2
GABPB1
SIRT7
NPB
PCYT2
CCND2
LMTK3
SIN3A
TMEM181
SUOX
RAPGEF2
SNRNP35
OR10H5
LOC390877
GTF2F1
CFLAR
SLC50A1
EFNA1
CCDC93
ZFYVE27
GUCA2A
SOX30
C5orf52
RRN3
CCDC42
UBE3B
KCTD10
CNIH1
STARD4
CEP43
SLC11A2
TOMM5
ZC3H12D
AXL
GLIS3
CCNI
LAMA3
MYD88
ACAA1
AMACR
GAS6
SELENON
INSIG2
TNFAIP8L1
GSAP
KDSR
LGALS4
DSP
PRR3
GNL1
UBE2R2
ACADM
TRIM2
GSTM4
GGCX
ZFAND6
MRPL24
XPNPEP1
C1orf74
DUSP18
KLF5
CKMT1A
CHAD
RSAD1
RHEX
TEP1
PYGL
ODC1
TMEM220
KATNB1
NCOA2
RIN3
APOL4
HOXA5
FAM102A
TMIGD3
IRF8
ADORA3
HOXA7
HOXA6
LRIG2
ANKRD6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PHF12
POLR2E
GPX4
RNF43
TMEM63A
LEFTY1
OR6V1
MESP2
UGT1A1
KIAA1549L
PTPRN
PDE5A
SLC7A5
IFNGR1
LAG3
CD4
NR1H3
ACP2
PRDM11
SMCO2
GUCY2C
ZNF195
C15orf40
NOMO3
ABCC6
TMEM262
NIPAL1
CNGA1
MRPL34
DDA1
ABHD8
ANKRD29
IL6ST
KDELR2
MGAT1
FOXQ1
PMM1
ATF4
DDAH1
DHX37
BRI3BP
VSIG2
NRGN
DHRS3
CHMP4B
MCRIP2
TTC22
FUT4
WFIKKN1
METTL26
LEXM
TARBP2
NPFF
MAP3K12
NYAP1
OVOL1
AP5B1
TRIM31
CPLX2
LIPK
JMJD1C
UBALD2
VILL
C19orf33
ZNF232
USP6
PDGFRB
CDX1
NT5DC1
RPL36AL
MGAT2
TIMP4
PXN
TFEB
PGC
LASP1
PABPC4
ZSWIM3
ACOT8
RAB5A
EFHB
TTC24
IQGAP3
CXCL17
EFNA2
RBM14-RBM4
RBM14
FAM174C
CEP85
MXD3
RAB24
PRELID1
GTF2IRD2B
SH3BGRL3
SLC20A1
DDC
ANO6
NRP1
TNFRSF21
ITGB3BP
EFCAB7
UGT8
CGN
OGFR
MRGBP
TNFSF4
CTTNBP2NL
EMX1
EOMES
F11R
GAB1
S100A16
S100A14
RARA
PUSL1
ACAP3
GNPAT
C1orf131
LSM14A
FOXP1
LEKR1
HLA-A
CAST
VAV1
SH2D3A
ZBTB48
LIPE
STARD7
KLHDC8B
RELL1
LZTS3
ZNF789
ATP5MF-PTCD1
ATP5MF
PYROXD1
ABAT
METTL27
CBWD5
CBWD3
RASSF9
HRH1
TNIP1
TOB2
PDE4D
SLC25A16
DRD4
PRKCA
MS4A8
PRR5
FRG2
PRR5-ARHGAP8
PRDM10
SLC12A3
CES3
SNX7
ADGRA1
EXT1
CD177
AP1M1
GSE1
PPP1R27
MCRIP1
C6orf132
MLH3
CEP170B
PLS1
MACC1
RGS3
WDR81
TLCD2
RREB1
EML6
VAC14
ST3GAL2
UAP1
FCSK
PALB2
DCTN5
EXD2
SYT17
RARRES1
DOCK8
CLCN3
ALPG
PANK1
DENND2B
IL4R
USH1C
OTOG
KIF21B
VARS2
GTF2H4
NEK7
STX18
SPO11
RFLNA
SUSD1
ABCB4
LRRC66
TNFRSF14
B3GNT3
THRA
UNC93B1
ALDH3B1
ZBED4
SLC30A10
BCL7B
SERPINA5
SH3D19
PPIP5K2
CORO1C
UBA6
HAGH
FAHD1
ZNF57
LSM2
HSPA1L
HSPA1A
MRPL11
CERKL
CDC14A
OSGIN1
HABP2
TACC1
OBI1
PPFIBP2
RAB6D
FRMD3
NDRG1
OCIAD1
GPR68
REXO4
ADAMTS13
SPATA5
NUDT6
MUC3A
CRY2
UFL1
NEIL1
MTF2
CEACAM16
CYCS
ETFDH
C4orf46
PDE11A
ALKBH7
PSPN
COL13A1
AKAP1
SRC
B4GALT4
GBA
CYP2C8
NME4
DECR2
RDH5
ITGA7
CD63
BLOC1S1
HSPG2
NRBF2
SLC25A45
FRMD8
PRLR
SAXO2
EFL1