We provide the detailed contents of the YAC-based rice transcript map with the following tables and figures (together Microsoft Excel format and pdf format for your download). Tables contain the detailed results of PCR-based YAC screening with the clone-specific EST primers. Figures contain the rice genetic and YAC physical maps with the assigned EST sites.
Because this archive has been created based on the following data of the last update date, it may not match the data in the current situation.

Users can download lists of sequences predicted as β-barrel membrane proteins in FASTA format, which can be used for further analysis. The site also provides prediction tools, such as　"TMBETA-DISC" and "TMBETA-SVM", which can discriminate transmembrane β-barrel proteins by inputting amino acid sequences. (These tools are not available in the LSDB Archive.)

A purpose of this study is to elucidate the correlation of "the three-dimensional structures and a function and phenotype of the protein" and the mechanisms of functional expression of the protein, in the resolving power of the atomic level, about the gene which is assumed to be important academically or agriculturally and industrially, utilizing  gene information, full-length cDNA, and so on, which was provided by the rice genome project, for general elucidation of the rice plant function and development of a policy to use a useful gene effectively. In this site, you can search the three-dimensional structures of the protein listed by each plant.