ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584303 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◣ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
RABL2A
PSMD1
NME6
MAPKAPK5
RWDD1
IPO13
POLR3F
DZANK1
CACTIN
SUDS3
PSMG2
CEP76
EFTUD2
CCDC103
NUP85
VDAC2
GRSF1
NVL
HSPA9
DYNC1LI2
SP5
RPL21
C19orf48
POLR2E
PMAIP1
STAM2
STAM
GOSR2
TBCK
AIMP1
TSN
ATP5MG
VTI1B
REXO1
NUP205
MRPS7
GGA3
EXOSC5
BCKDHA
NDUFA4
DCTN1
CAPRIN1
SEC61B
ALG2
BLCAP
IRGQ
ZNF576
UPF2
PES1
PNO1
SKP1
NEUROG2
NCLN
PAK1IP1
C6orf52
FARSB
RBBP5
SLC35B1
TSNAX
ACTR10
DPH6
SELENOF
HS2ST1
GOLGA5
SRD5A1
HADHB
HADHA
UBE2I
TMED1
LYRM4
FARS2
RPS12
PROSER1
NHLRC3
PCBP1
VARS1
RBKS
BABAM2
TTC8
PSMD12
ICE1
RPS23
ATP6AP1L
SPECC1
MRPS5
ANAPC7
USP1
SMC2
COX7A2L
EIF4ENIF1
ZRANB2
PI4KB
ISCU
SART3
FAM104A
C17orf80
IQCG
RPL35A
SUPV3L1
RABGGTB
PDAP1
BUD31
ADK
AP3M1
UFM1
PAF1
BAG6
TM9SF1
PRSS56
SF3B3
COG4
XPNPEP3
ST13
NKD1
PTGES2
OSGEP
APEX1
COMMD1
CCT4
PDZD2
PIN4
DDX39B
RPS27A
CLHC1
STK36
RNF25
NEUROG1
NEUROG3
RPS29
LRR1
BICRA
SUCLG1
NDUFA10
IGFBP2
OR2L13
EIF2S3
ANKLE2
KLF17
TAF9
RAD17
AK6
SLC39A7
RXRB
OAZ3
MRPL9
ZSWIM6
SEC11C
PDHX
APIP
ARHGAP11A-SCG5
ARHGAP11A
HOXA4
GADD45GIP1
RPL7
RDH10
CPSF4L
GPR78
ATOH1
CDC73
OTX1
GADD45G
MRTO4
EMC1
PDPN
PCBD2
BNIP3
GTF3C4
DDX31
GORAB
CDX1
HES1
CNPY2
RPN1
METTL11B
WBP1L
TMPPE
GLB1
ST18
RBBP7
PNKD
CSRNP1
ZNF383
SMPD1
AXDND1
STK38
SKIL
ALKBH5
TLE3
PRUNE2
MALRD1
ZGPAT
ARFRP1
SP7
LZTFL1
PALM2AKAP2
CTXN3
EBP
MRPL38
MYRIP
PDHB
HSPA1B
CLGN
UROD
HECTD3
SRSF11
LRRC40
NEBL
GIMAP5
MEIS2
YWHAB
LY6G6D
SP8
TKT
CPVL
CHN2
RNF32
VEZT
FGD6
SPCS1
GLT8D1
PDE12
LRRC8C
FAM3C
EIF4H
PCBP4
NUP210
FAM72D
GUK1
HOXB4
TBC1D8
MEIS3
CIAO2A
DGKZ
SUSD6
HERPUD1
TLE2
FAM107B
DKK1
NELFA
ITPRIP
TMEM131L
H3C12
ARSI
SH3D19
PTGES3
ULBP3
MYORG
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BNIP2
RPS24
COQ3
TK1
HOXA3
CS
GCNT2
CMTR1
TRAP1
YAP1
LINGO1
ZNF503
HOXC4
LIN28B
ZNF471
CCDC43
CFAP410
RPS10-NUDT3
RPS10
TCHP
PAPPA
INSM1
PANK2
TPRA1
RARA
ARHGAP24
RNF138
CHD8
AXIN2
TMEM70
ZNF746
HOXB1
MAPK8
MUSTN1
CCDC169-SOHLH2
CCDC169
NABP1
DSCAML1
QPRT
HEBP1
CDK5R1
SERTAD3
ZFHX3
RSPO4
FBXO46
FAM162A
CCDC58
PCDH18
MPZL2
LIN28A
USP17L15
MTCH2
KRTAP3-1
ZNF341
DTNB
CCDC114
ASIP
CLDN2
SREBF1
SYT7
SH2B1
BBS9
KDM3A
ADM
CLDN3
SOX12
CERS6
LSM14B
NRARP
TRDMT1
IRS2
ZGRF1
LARP7
KAT6B
CCNI
MRPL34
PAX3
LIMS1
NEDD9
TBC1D10A
ANO4
TMEM114
KMT2A
ANK2
REC8
RARB
VENTX
SYBU
MBNL3
SLC10A2
MAP1A
PKD1
PEPD
CYREN
DHX32
CENPBD1
TCF20
GAS2L1
RCOR3
STARD4
TBL1XR1
MXD3
TLE4
SIPA1
RXYLT1
CD9
LPIN1
OR8J1
CSTF2T
RPRM
CSNK2A2
TLE1
BTRC
ZFHX4
NPAS4
CER1
SERPING1
RUNX1T1
H4C6
PAH
ASCL1
MSGN1
PAX6
HOXC6
MEPCE
ZCWPW1
TFDP2
BRWD1
CBX5
PLEKHA5
RNF38
ZNF76
DLL3
HOXC5
PRTG
NEURL2
CTSA
TAGLN3
MGST1
DDX46
WNT5B
STRADA
PEX14
SPIN1
DUSP12
PLEKHA6
CCNDBP1
REST
RFFL
ACOX2
BAK1
KRTAP4-12
OTUD7B
CASC3
DUSP4
NDUFS7
SOX6
ZBTB45
GCK
GPX3
PIM1
STRA6
DRAP1
C11orf68
TRIP12
FBXO36
PCF11
ABHD2
HOXA2
C16orf91
ID2
RBPJ
GATA4
GPR108
KAZALD1
ARSG
SPATC1L
NR2F1
PRDM12
RASSF2
FLOT1
DUSP6
INAFM2
BFSP1
SH3BP2
RNF149
UPF3A
MBD2
ZNF608
RGS12
FOXP1
CBX3
HUS1
MTRNR2L2
MTRNR2L8
ARID5A
RAI14
NEO1
HEXIM2
SP2
PARK7
CCPG1
C15orf65
TIGD1
EIF4E2
HNRNPD
RPS6KA1
SEC14L1
C11orf24
KCNAB2
SLCO4C1
GRHL3
CCDC88A
ID1
ARHGEF10L
NADK
NCOA2
FGFRL1
VOPP1
NBEAL2
SKIV2L
NELFE
LPCAT3
MTMR4
BIN2
FGR
DIAPH1
CDCA7L
NBPF1
MEF2C
CAMTA1
USP15
SNX3
WNT10B
LNPEP
CABIN1
CDC42EP3
DENND2D
CCDC174
DIAPH3
DDX3X
PRDM10
RSRC1
POR
ZCCHC3
NFKBIA
IQCH
AAGAB
CD38
TRAF4
ING1
VAV1
HEBP2
ATP23
CNOT2
DHRS3
PCNA
RASSF5
POLR2J3
SPACA1
EXOSC4
MINDY2
IQGAP2
HES3
PKN2
FAM110A
PPIB
RYBP
SHB
SMARCD2
PLCB2
NKIRAS1
POLR3A
PCTP
IFRD2
H6PD
YTHDF2
NDFIP2
CEP41
HMGCS1
PRDM1
CFD
SLC35E2B
HESX1
PXYLP1
TBRG4
HIBADH
ARIH2
PLEKHO2
NR1D2
RNF139
JAK3
SH3TC1
CYCS
PDE4D
ZDHHC4
PKM
ZNF740
CSAD
DYNLL1
GTF3A
SOD2
PIK3AP1
KANSL3
HNRNPA2B1
LTBR
DPP9
CLIC4
CBFA2T3
NR2C1
KCTD6
AKIRIN1
ADCY7
KIF26A
TTI2
ATXN1L
SLC35E2A
RBL2
HOXB3
HES5
SRPRA
FCHSD2
TMEM222
SSX2IP
FAF2
C12orf29
ARHGEF1
RARG
CALM2
CD164
USP3
CTTN
SLC39A13
KIF21B
ANKRD13D
TRMT6
MCM8
TBX2
RMND5A
MRPS24
TRERF1
SNAPC3
BAZ1B
LAPTM5
TXNRD1
USP42
NOTCH2NLA
ARHGAP4
UNC13D
STX18
SBNO2
CLTC
PIP4P2
MAP2K1
VANGL2
MAD1L1
MTF2
KCNH2
IL21R
PPCDC
MTCH1
DGAT2
CENPH
ZNF25
RNF125
ATG16L2
RASGRP2
PEAK3
THRAP3
COX5A
MRPS31
GFRA3
NOTCH2NLC
PKDCC
EPM2A
RAD50
PIKFYVE
ZBTB17
KAT6A
SDE2
ARL4A
PSMD3
LRIG3
FBXO41
ZNF414
RFESD
ADAM17
RXRA
KEAP1
ACOT2
RWDD2A
PGM3
MC1R
MTRF1L
WTAP
LSM5
MAGEF1
ERLIN2
RCOR1
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
ZNF318
ASNS
USPL1
HMGB1
PEX3
ADAT2
ATAD3B
UBL7
DYNLT1
DONSON
VPS37C
C1orf159
TUBB
FXYD2
HOXD3
NOTCH2
MAST2
GPATCH8
NGRN
MCU
FAM120B
RNF103-CHMP3
PNRC2
PHF19
MAPKAPK3
CISH
TCF4
TIGD5
EEF1D
CBWD6
RER1
MORN1
UPP1
ARF3
C18orf32
BUD13
LIX1
IFNGR1
NIBAN2
DDX23
FAM227B
FABP5
DTWD1
GABRB2
NCBP2AS2
NCBP2
ATAD3A
USP21
NOTCH2NLB
LRCH4
FBXO24
KIF1C
INCA1
KMT5A
CCDC59
CYB5R4
HPF1
DENND1A
TDP2
CNOT6
BHLHE40
ACOT13
JAKMIP1
NINJ2
RAP1GAP2
NUDT15
ARHGAP45
SYPL1
NANP
YY1AP1
DAP3
C12orf65
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
PCMT1
AVL9
CDS2
NMNAT1
LZIC
CEP135
ASB1
SLC7A5
MYCBP2
TSPAN4
POLR2L
ATG5
APBB1IP
CACYBP
CCNL1
SERTAD2
SEH1L
PTDSS1
MTERF3
MFN2
ZCCHC24
GSPT1
KRI1
EIF3D
C21orf91
SNUPN
LTB4R
LANCL2
EIF5
UNK
ADORA2A
HYLS1
SREBF2
PSMF1
HMGCL
MTMR1
ZNF219
TBX3
RPLP1
RITA1
DDX54
GFER
ASH1L
GTF2H3
EIF2B1
BRAT1
CTSC
DISP3
TAS1R1
NOL9
UBIAD1
FDX1
IMPA1
CD63
USP34
TMEM199
POLDIP2
MAPK6
THUMPD3
DLX2
FNTA
NAA40
SLC16A6
LAMP1
MT2A
KDM1A
NOC4L
DDX51
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ZNF395
ARHGAP27
MKRN2
ARF4
ZFAND2A
MBD6
NREP
CARMIL1
BRAP
ACAD10
ATOH8
IL6R
POLD2
FKBP1A
ACVR1
EIF1B
PTK2B
LONRF3
PGD
RPS3
PGLS
SLC25A6
RPL8
ATG101
TKFC
DDB1
SGK1
MDM2
HNRNPF
CHST11
TNFRSF19
ELOVL6
RIMBP3
GARS1
TMEM65
CDC42
FAF1
DNAH7
RAN
DYNC2H1
CSNK1A1
BOD1L1
GFUS
CNPY3
POU2F1
GALE
LCOR
DHRS4L2
DHRS4
DNAJB2
SPRY2
SMIM20
NCKAP5L
SMG6
RERE
FKBP5
EHD1
SPPL2A
UBE2K
PPIL4
CXXC4
MRPL20
PEX2
DENND4B
C6orf89
ABHD12
RCC2
POLG
SNAPC5
PPP4R3B
TPP2
TBL3
ZC3H6
GPCPD1
RAC2
PRKAB1
IPP
NUS1
ELMO1
CLCN3
FOS
NCBP3
RBSN
B3GALNT2
MACROH2A1
TMEM41A
SLC35A1
PTP4A2
GFRA1
CD93
TAF12
RAB11FIP1
INTS5
PSTPIP1
CLN5
MRPS28
ZNF593
RNF19A
RGS14
LRRC59
C1orf232
THYN1
RNF216
ETFA
ACAD8
DCP1A
TRAM1
PRR19
PAFAH1B3
PRKAG1
SPDYE14
SPDYE10P
CCDC92
PPP1R8
C15orf61
SPTBN5
NDUFV1
MYADM
GATD3B
GATD3A
ZBTB12
SEPTIN2
HDLBP
STARD3
RBM15B
ZNF397
ZBTB25
ZBTB1
FADS2
FADS1
IQSEC1
ATXN2
SECISBP2L
MARCHF7
IDS
ZNF774
UHRF2
ABCF1
SNX15
LGALS1
CNR1
WDR53
SEC13
SCAMP4
FBXO45
CAP1
ARID1A
ADAT3
DTX2
DHDDS
RCN2
OSBPL3
DBI
CYP2W1
C2orf76
SLC43A3
MIDEAS
NOL4L
RAB3D
PSMD9
HPD
BIRC2
RUNX3
CLK1
MT1G
RNF168
PURB
PLAGL1
ADPGK
TRNAU1AP
FOXN2
EXD1
CHP1
NIBAN1
CPQ
ZFAND3
SPATC1
LST1
TESMIN
RNF34
HBS1L
RFC2
PDZRN3
MAP2K3
MVK
GNA13
TMEM123
URGCP
ANKRD36C
YARS1
S100PBP