ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
ING1
MRPS28
PXYLP1
NDUFS7
CBX5
HNRNPA1
CNOT2
OTUD7B
RBKS
BABAM2
POLD2
RARG
ZBTB7C
SMARCD2
KANSL3
ITFG2
ZCCHC24
ATXN1L
GPRC5A
REEP6
PCSK4
TAF1A
DONSON
PKN2
CLK1
METTL3
HORMAD1
WDR7
FLOT1
TUBB
RAE1
ZFP36L1
MTRNR2L2
GATD3B
GATD3A
DYNLT1
KDM3A
ZGPAT
ARFRP1
NANP
CCDC174
LOC114841035
FKBP2
STX18
MBD2
RASA4
ASNSD1
ASDURF
GPR108
MAMLD1
EIF5
CTF1
MAML3
NR2C1
MTRNR2L8
RASA4B
NUDT15
UQCR11
ZNF395
BACE2
USP42
RARA
SKIDA1
IMPA1
C19orf12
HECTD4
CTBP2
UROS
BCCIP
KLK10
TRMT1L
SWT1
LIPA
TRIP12
FBXO36
USP1
PTGES3
TMEM241
CLCN3
STAT2
FAAP24
CEP89
DUS1L
SNRPA
C19orf54
EFEMP2
ATP6V0B
NCOA7
PMPCB
CFAP69
CASP9
PPP2R5A
ANKS1B
MIGA1
TRABD
CYB5R4
MRPS31
TEX264
CBR4
INTS5
SLC29A2
NCLN
SEPTIN2
HDLBP
UQCRC2
FOXP1
PPP1R13B
USP37
CNOT9
SZT2
MED8
PDCL
RPL37
ALDOA
KMT5A
FXYD3
SREBF1
MED9
RNF207
SMIM20
GMNN
BAZ1B
DRG1
SLC25A16
HGH1
GCN1
SERTAD2
FKBPL
NPNT
COLEC11
TSPAN10
NPLOC4
RASAL1
NEURL2
CTSA
SENP8
MYO9A
RNF121
LOC100133315
MRPL54
CHCHD1
SH3YL1
ACP1
ADAM17
RNF220
ST8SIA6
MINDY3
CCDC59
SLC11A2
BAG6
TP53INP2
AARS2
TECPR1
MELTF
ABHD3
SH2B1
CCL28
C12orf73
GDPGP1
CIB1
RGPD2
RGPD1
RPL5
TDRD3
TNPO3
SPIN1
AFF1
HBP1
KLHDC2
PARP9
DTX3L
ROGDI
FDXACB1
C11orf1
MRPS16
RPS3A
PCTP
TTK
VARS1
SOD2
WTAP
FABP5
NAA40
TLR5
EXOSC4
MYADM
RPS19
SCNM1
LYSMD1
CDKN2D
ENTPD5
BBOF1
SERPINI1
PDCD10
PCCA
HDAC9
DBP
ATXN2
NOTCH1
EPM2A
KBTBD3
AASDHPPT
ZNF133
SLC39A9
ERH
SLC30A4
SAMD12
SIPA1
DNAJC27
TAF6L
CLK2
RIMS1
ACYP1
ZC2HC1C
MKRN3
DUSP4
CGGBP1
C3orf38
DHRS3
BRD2
ARIH2
RNASE4
ANG
LCN2
MBD6
CEP70
TRIM38
AP2M1
KLF5
MIEN1
SRCAP
LOC730183
TMED10
ZNF77
MINDY2
UBE2V2
ARID4A
MDM2
DZIP3
CIP2A
PRUNE1
MINDY1
BCO2
SLC25A6
DPP9
ALKBH7
RBM19
SEC24C
IFT22
ECH1
ZNF318
SP2
SKIV2L
NELFE
ABHD14B
SMPD2
PPIL6
CD46
TXNDC11
LRRC1
ESRP1
ACSS3
RPS8
KCNQ4
ZNF746
ATP6V0E2
GPATCH8
INPP5K
KAT6B
AP1B1
ETFRF1
CFAP94
MACROH2A1
ZNF384
LEKR1
SLC25A35
ZNF85
ANXA7
SEC23A
SNX12
NEPRO
STAM2
LSM8
GBA
FDX1
URGCP
OTUD5
ADA
URGCP-MRPS24
POMP
TBC1D22A
OSGIN2
MRPS36
PIM3
SCAP
AKTIP
HNRNPA1L2
MRPS33
DNAH14
DTX3
CNDP2
GRK6
HEXIM1
CCDC71
CCDC102A
DDT
DDTL
SPAG16
SNRNP35
TP53INP1
LRRC61
ACTR3C
LARP1
IVNS1ABP
DKC1
POLDIP3
TRIM26
SMAGP
SBNO1
ACBD3
ANAPC15
ADM
TAOK3
HIKESHI
KBTBD2
TBC1D8B
WWTR1
SLX1B
SLX1A
BOLA2B
BOLA2-SMG1P6
PRR3
GNL1
CAND1
KCNS3
B4GALT6
IQANK1
FAM83H
DYNLL1
SRSF9
RNGTT
LUC7L2
SYS1
ESR2
SUDS3
SEC61B
ALG2
ZXDC
ZNF492
CXCR4
NFKBIA
DCAF7
SLC25A53
FAM3C
SRSF2
MFSD11
SLC22A4
HIC1
ZNF446
KMT5C
RPL34
EXD2
CCDC120
XRCC6
DESI1
CEP78
C16orf70
UFD1
CDC45
LEO1
MCOLN1
BAG2
PCDH1
AXDND1
CYP4F11
MROH1
PSMA3
RBM7
C11orf71
PAXBP1
ENOX2
LMF1
SOX8
SRSF3
IRF9
GBF1
COX5A
MYL12B
PRKD2
NEK2
ZFP41
SIRT4
NUDT17
MAP4K5
ATL1
PEX2
STK11
SLC38A1
ZNF563
C12orf65
MT2A
SLC3A2
IRX3
SCYL3
ISYNA1
MFSD8
ABHD18
PCBP2
FZD4
CALM2
CSTB
BBS9
SREBF2
P4HA1
AASDH
DDX1
TMPRSS12
FAM114A1
PLBD2
DNAJA2
ZBTB44
SMG5
C2orf73
SIKE1
OSBPL1A
THAP7
ACADM
DNAH12
ZNF69
EPHA7
GFM1
LAMTOR5
NDUFA10
MRPL34
ABHD8
ENOSF1
CLK4
MRM1
ST3GAL4
MAPT
TENT2
TRAPPC6B
PLEKHG3
RAB11FIP2
PELI2
MPZL2
CASD1
FMC1-LUC7L2
FMC1
CLDN7
ZDHHC3
EXOSC7
DSG2
ADRM1
RNF135
RPS14
AGPAT3
MADCAM1
KRIT1
ANKIB1
ZNF76
PRPSAP1
PRELID3B
CD320
AMER1
HSPA6
POLR2B
UFSP1
ZNF891
ZNF10
PSMD14
DYM
OSR1
DNAJB1
TECR
CRNKL1
CFAP61
CLDN4
LRRC59
RNF168
NLRX1
BLVRB
DYRK2
SPTBN4
SYCP2L
CCDC9
HNRNPLL
SNRPD1
WARS2
TMEM209
TACC2
DTNB
MRPS18B
LTBR
POLRMT
EFS
HUS1
PNKD
TOE1
MUTYH
SLC4A2
DHCR7
CDK5
ZNF484
SLC30A7
COP1
EXTL2
KIF20A
BRD8
WDR81
OSER1
TAF2
SEMA3E
CCDC130
SH2D3A
YIF1B
NOD1
DDX5
CYB5A
SNX3
ZBTB45
ELP6
SHPRH
ARHGAP35
TAF12
DENND6A
SRSF5
ZNF572
SYPL1
TMEM129
TACC3
SUPT7L
SLC4A1AP
C2CD4D
RUFY1
CCDC38
AMDHD1
KRT7
ADCK1
NUP85
HIBADH
NIBAN2
DCAF10
CTNNA1
GOLT1A
TXNRD1
PAK4
COMMD3-BMI1
COMMD3
OBP2B
KLHL7
ANKRD50
GXYLT1
GABARAPL1
RBM15
HINT3
CDK13
SIK3
NAGK
CYB5R2
PAN2
GSPT1
THUMPD3
HES4
CUL5
PPIL2
ZNF506
FASTKD2
POLR3B
TMEM53
ARMH1
RPS12
HINT2
CRY2
KHNYN
CBLN3
R3HCC1L
MDP1
REL
PNISR
STRAP
MON1B
IDH3B
ZNF675
RNF19A
SMAD1
WDR43
FOXJ3
AGPAT1
RNF5
DMAP1
HLA-E
KHDRBS1
UQCRH
LRRC41
GSE1
KIF22
ITGB3BP
EFCAB7
NR4A1
PLPP2
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
CACTIN
POLR3F
DZANK1
IPO13
RWDD1
DYNC1LI2
PSMG2
CEP76
VDAC2
HSPA9
EFTUD2
CCDC103
NVL
VTI1B
NUP205
RPL21
POLR2E
TBCK
AIMP1
GOSR2
MRPS7
GGA3
DCTN1
C19orf48
ATP5MG
EXOSC5
BCKDHA
REXO1
STAM
SRD5A1
SKP1
HADHB
HADHA
TSNAX
FARSB
BLCAP
TSN
LYRM4
FARS2
UPF2
IRGQ
ZNF576
SLC35B1
PES1
ACTR10
NDUFA4
PNO1
PAK1IP1
C6orf52
CAPRIN1
DPH6
TTC8
PSMD12
COX7A2L
GOLGA5
SUPV3L1
RBBP5
ISCU
RPS23
ATP6AP1L
TMED1
MRPS5
ZRANB2
IQCG
PI4KB
SMC2
ANAPC7
RPL35A
SART3
PDAP1
BUD31
EIF4ENIF1
PCBP1
SELENOF
HS2ST1
NEUROG2
ADK
AP3M1
ICE1
FAM104A
C17orf80
UFM1
RABGGTB
XPNPEP3
ST13
PROSER1
NHLRC3
SF3B3
COG4
RPS27A
CLHC1
NEUROG3
OSGEP
APEX1
TM9SF1
COMMD1
CCT4
PAF1
HES1
PTGES2
DDX39B
UBE2I
RPS29
LRR1
PIN4
VEZT
FGD6
ARHGAP11A-SCG5
ARHGAP11A
MRTO4
EMC1
TAF9
RAD17
AK6
PMAIP1
SUCLG1
HOXA4
ATOH1
NEUROG1
EIF2S3
SEC11C
RPL7
RDH10
STK36
RNF25
BICRA
BNIP3
IGFBP2
SKIL
GADD45GIP1
OAZ3
MRPL9
HOXA2
CNPY2
GTF3C4
DDX31
PCBD2
PDHX
APIP
CDC73
RPN1
C16orf91
ANKLE2
ID2
ZNF383
PRUNE2
GORAB
ST18
TLE4
SP5
TPRA1
RBPJ
ANK2
PDHB
INSM1
CLGN
TLE2
GATA4
TMEM70
MALRD1
MYRIP
ALKBH5
MRPL38
RBBP7
GADD45G
CCNDBP1
GRSF1
KAZALD1
ARSG
SPATC1L
NR2F1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
KMT2A
ZFHX4
PRDM12
HOXB4
RASSF2
SPCS1
GLT8D1
DUSP6
INAFM2
TMPPE
GLB1
BFSP1
SH3BP2
RNF149
UPF3A
METTL11B
ZNF608
RGS12
HOXA3
RPS10-NUDT3
RPS10
LPIN1
CBX3
CS
LIN28A
DSCAML1
HSPA1B
ARID5A
SRSF11
LRRC40
RAI14
NEO1
HEXIM2
ZFHX3
PARK7
NELFA
CCPG1
C15orf65
TIGD1
EIF4E2
HNRNPD
RPS6KA1
SEC14L1
HOXC5
C11orf24
KCNAB2
ARHGAP24
SLCO4C1
GRHL3
CCDC88A
SPECC1
ID1
BRWD1
ARHGEF10L
NADK
STK38
NCOA2
FGFRL1
VOPP1
KLF17
NBEAL2
NKD1
CPSF4L
MTMR4
BIN2
FGR
DIAPH1
CDCA7L
NBPF1
MEF2C
CAMTA1
USP15
WNT10B
LNPEP
CABIN1
CDC42EP3
DENND2D
DIAPH3
DDX3X
REC8
PRDM10
RSRC1
RUNX1T1
POR
TBC1D8
ZCCHC3
IQCH
AAGAB
CD38
TRAF4
VAV1
HEBP2
CMTR1
ATP23
PCNA
RASSF5
POLR2J3
OTX1
SPACA1
IQGAP2
HES3
CLDN2
FAM110A
PPIB
PDPN
RYBP
SHB
PLCB2
NKIRAS1
POLR3A
IFRD2
H6PD
PEX14
YTHDF2
NDFIP2
CEP41
HMGCS1
PRDM1
CFD
SLC35E2B
HESX1
TBRG4
PLEKHO2
NR1D2
RNF139
JAK3
SH3TC1
CYCS
PDE4D
ZDHHC4
PKM
CCDC114
ZNF740
CSAD
SP7
BNIP2
GTF3A
PIK3AP1
HNRNPA2B1
CLIC4
CBFA2T3
KCTD6
AKIRIN1
ADCY7
PRSS56
KIF26A
DGKZ
TTI2
SLC35E2A
RBL2
HOXB3
HES5
SRPRA
FCHSD2
TMEM222
SSX2IP
FAF2
C12orf29
ARHGEF1
CASC3
ZNF341
CD164
USP3
CTTN
SLC39A13
KIF21B
ANKRD13D
TRMT6
MCM8
TBX2
RMND5A
CSRNP1
MRPS24
TRERF1
SNAPC3
LAPTM5
NOTCH2NLA
ARHGAP4
UNC13D
SLC10A2
SBNO2
CLTC
PIP4P2
MAP2K1
VANGL2
MAD1L1
MTF2
KCNH2
IL21R
PPCDC
MTCH1
DGAT2
CENPH
ZNF25
RNF125
ATG16L2
RASGRP2
PEAK3
THRAP3
ZNF503
CDX1
GFRA3
NOTCH2NLC
EIF4H
PKDCC
ZSWIM6
RAD50
PIKFYVE
ZBTB17
KAT6A
SDE2