ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039040 | iPS derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◣ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
ZNF335
PSMD1
POLR3F
DZANK1
IPO13
DYNC1LI2
CACTIN
EFTUD2
CCDC103
NME6
NUP205
MAPKAPK5
NEUROG3
PSMG2
CEP76
SUDS3
RPL21
NUP85
MRPS7
GGA3
VDAC2
NVL
HSPA9
DCTN1
RWDD1
VTI1B
GOSR2
TBCK
AIMP1
TSNAX
DPH6
STAM2
SKP1
HADHB
HADHA
STAM
RBKS
BABAM2
POLR2E
ATP5MG
C19orf48
SEC61B
ALG2
PAK1IP1
C6orf52
SMC2
EXOSC5
BCKDHA
SRD5A1
IRGQ
ZNF576
ACTR10
MRPS5
NCLN
TMED1
SLC35B1
COX7A2L
TTC8
TSN
PI4KB
NEUROG1
PNO1
FARSB
PDAP1
BUD31
LYRM4
FARS2
GOLGA5
ADK
AP3M1
PES1
BLCAP
SUPV3L1
VARS1
FAM104A
C17orf80
REXO1
IQCG
RPL35A
RPS23
ATP6AP1L
EIF4ENIF1
CAPRIN1
UPF2
COMMD1
CCT4
ZRANB2
TM9SF1
SELENOF
HS2ST1
RBBP5
ISCU
SART3
NDUFA4
USP1
ANAPC7
PSMD12
ICE1
UFM1
PCBP1
TMEM70
BAG6
PROSER1
NHLRC3
OSGEP
APEX1
PAF1
MYRIP
SF3B3
COG4
ATOH1
RABGGTB
XPNPEP3
ST13
ST18
PTGES2
CABIN1
RPS12
PIN4
VEZT
FGD6
ZGPAT
ARFRP1
RPS29
LRR1
NDUFA10
RPS27A
CLHC1
EIF2S3
RBPJ
DDX39B
BNIP3
GADD45GIP1
RBL2
RPL7
RDH10
HES1
MBD2
TAF9
RAD17
AK6
DENND1A
GORAB
PCBD2
LPIN1
GPR108
DTNB
ZNF746
HSPA1B
ANKLE2
NEUROG2
SHB
GADD45G
MRTO4
EMC1
ACOT2
PDE12
SEC11C
STK36
RNF25
PRUNE2
FGFRL1
CCDC92
CCNDBP1
PDHX
APIP
PMAIP1
HESX1
TLE2
SKIL
RYBP
AXDND1
GTF3C4
DDX31
ARHGAP11A-SCG5
ARHGAP11A
NKIRAS1
NR1D2
APLN
ZNF704
ALKBH5
TPRA1
ZNF383
SUCLG1
PLA1A
RPN1
SPIN1
TIGD1
EIF4E2
CDC73
MAST2
ID2
ACOT1
GABRB2
TLE3
RARA
UBE2I
SPCS1
GLT8D1
DLX4
OAZ3
MRPL9
UPF3A
SRSF11
LRRC40
GSR
S100A10
CNPY2
LIN28A
RAN
RTL10
GNB1L
FOXP1
BFSP1
CERKL
HOXB9
MELTF
RIMS1
NEFH
RUNX1T1
RSPO4
RBBP7
METRN
CDX1
B3GNT4
AP1B1
CALM2
PDHB
PRSS47
GSX1
GC
TBC1D8
TMPPE
GLB1
DUSP4
GATA4
LCOR
PKDCC
MKRN2
KAT6B
RPS10-NUDT3
RPS10
UBXN11
CD52
KIF21B
MTCH2
ADM
APBB1IP
C15orf61
DUSP14
CCDC174
DDX3X
TNFRSF19
PCLO
OTP
KAZALD1
SERTAD2
LPCAT3
SMARCA4
MRPL38
KMT5A
BICRA
GTF3A
CIAO2A
RNF207
CPVL
CHN2
STRADA
FOXP2
GRHL2
KLF17
SNRPA
C19orf54
EIF4H
NRDE2
IRX4
OTUD7B
C16orf91
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HNRNPD
MEF2B
ZNF891
ZNF10
SEPTIN2
HDLBP
SMAGP
PAH
ASCL1
TCF7
UROD
HECTD3
REC8
SCAMP4
ADAT3
NCOA2
H3-3A
KMT5C
RNF32
CNR1
PLEKHA6
RARB
TCHP
SLC30A4
CLDN15
KCNJ4
VENTX
JAKMIP1
WNT3
ZNF395
NEURL2
CTSA
ATP6V0A4
DYNLT1
MACROH2A1
JAK1
NR2C1
TAS2R7
RPS24
USP17L15
SLC25A6
ZNF397
METTL11B
PCTP
JUP
BRWD1
CEMP1
FAM53B
SEMA6D
CD24
STX18
MARVELD3
KMT2A
NRG1
SH2B1
CDS1
EOMES
PEX14
MEPCE
ZCWPW1
MECOM
RUSC2
CYP26A1
ESRRG
COX5A
BEND4
FBXL4
SERTAD3
MAPRE1
MAPK12
SOD2
ACAT2
ANXA9
EVC2
SH3YL1
ACP1
KCNS3
AKAP10
HINT1
NELFA
MDM2
PRELID3B
BAMBI
ADAM17
PLXNB1
ERI1
UFSP2
TARBP2
PRKD1
RBBP8NL
YTHDF2
ZBTB25
ZBTB1
ACYP1
ZC2HC1C
ROGDI
CDC42EP3
PKIB
NANP
PRDM10
TRAP1
ZNF248
CS
KDM3A
CNOT2
LIX1
CENPBD1
CTF1
DNAJB5
BTBD3
PFN2
MRPL34
ABHD8
KDM7A
SLC40A1
METTL27
IKZF2
CLGN
CDC42SE2
ZSCAN30
KDM4C
BBS9
MINDY2
KCNQ4
TMEM54
ING1
KAT6A
SS18L1
PSMA7
SGK1
PIGU
RBMS3
PTPRG
CLK1
FAM162A
CCDC58
CTSZ
RPS3A
PXYLP1
ZDHHC17
CPLX1
DHRS3
CCDC59
GATD3B
GATD3A
INSM1
DONSON
PDE4D
CTBP2
ACTB
ACTR6
TMEM211
GLI1
ZNF341
MDK
EIF5
RGPD8
RGPD5
PEX2
BCO2
KLHL4
RAPH1
ZNF485
SBNO2
SNX3
ABCC6
HSPA4L
ZBTB17
NOL4
SRSF10
ZBTB20
HIC2
EPS8
WDR7
LAD1
PPP1R13B
RPS8
CMTR1
SYDE2
NAA40
TRIP12
FBXO36
SLC11A2
ZFAND6
RILPL1
CLCN3
NPNT
TTC21B
IGFBP2
RHOBTB1
PDE4C
HOXA4
HOXA2
TLE4
SP5
ANK2
MALRD1
GRSF1
ARSG
SPATC1L
NR2F1
ZFHX4
PRDM12
HOXB4
RASSF2
FLOT1
NDUFS7
DUSP6
INAFM2
SH3BP2
RNF149
ZNF608
RGS12
HOXA3
CBX3
HUS1
MTRNR2L2
MTRNR2L8
DSCAML1
ARID5A
RAI14
NEO1
HEXIM2
ZFHX3
SP2
PARK7
CCPG1
C15orf65
RPS6KA1
SEC14L1
HOXC5
C11orf24
KCNAB2
ARHGAP24
SLCO4C1
GRHL3
CCDC88A
SPECC1
ID1
ARHGEF10L
NADK
STK38
VOPP1
NBEAL2
SKIV2L
NELFE
NKD1
CPSF4L
MTMR4
BIN2
FGR
DIAPH1
CDCA7L
NBPF1
ZNF76
MEF2C
CAMTA1
USP15
WNT10B
LNPEP
DENND2D
DIAPH3
RSRC1
POR
ZCCHC3
NFKBIA
IQCH
AAGAB
CD38
TRAF4
VAV1
HEBP2
ATP23
PNKD
PCNA
RASSF5
POLR2J3
OTX1
SPACA1
EXOSC4
IQGAP2
HES3
PKN2
CLDN2
FAM110A
PPIB
PDPN
SMARCD2
PLCB2
POLR3A
IFRD2
H6PD
NDFIP2
CEP41
HMGCS1
PRDM1
CFD
SLC35E2B
TBRG4
HIBADH
ARIH2
PLEKHO2
RNF139
JAK3
SH3TC1
CYCS
ZDHHC4
PKM
CCDC114
ZNF740
CSAD
SP7
BNIP2
DYNLL1
PIK3AP1
KANSL3
HNRNPA2B1
LTBR
DPP9
CLIC4
CBFA2T3
KCTD6
AKIRIN1
ADCY7
PRSS56
KIF26A
DGKZ
TTI2
ATXN1L
SLC35E2A
PTGES3
HOXB3
HES5
SRPRA
FCHSD2
TMEM222
SSX2IP
FAF2
C12orf29
ARHGEF1
RARG
CASC3
CD164
USP3
CTTN
SLC39A13
ANKRD13D
TRMT6
MCM8
TBX2
RMND5A
CSRNP1
MRPS24
TRERF1
SNAPC3
BAZ1B
LAPTM5
TXNRD1
USP42
NOTCH2NLA
ARHGAP4
UNC13D
SLC10A2
CLTC
PIP4P2
MAP2K1
VANGL2
MAD1L1
MTF2
KCNH2
IL21R
PPCDC
MTCH1
DGAT2
CENPH
ZNF25
RNF125
ATG16L2
RASGRP2
PEAK3
THRAP3
MRPS31
ZNF503
GFRA3
NOTCH2NLC
ZSWIM6
EPM2A
RAD50
PIKFYVE
SDE2
ARL4A
PSMD3
LRIG3
FBXO41
SMPD1
ZNF414
QPRT
RFESD
RXRA
KEAP1
RWDD2A
PGM3
MC1R
MTRF1L
WTAP
LSM5
MAGEF1
ERLIN2
RCOR1
CBWD5
CBWD3
NIBAN3
SERPINB1
PRKDC
MCM4
PANK2
ZNF318
ASNS
USPL1
HMGB1
PEX3
ADAT2
ATAD3B
UBL7
VPS37C
C1orf159
TUBB
FXYD2
HOXD3
NOTCH2
OR2L13
GPATCH8
NGRN
MCU
FAM120B
RNF103-CHMP3
PNRC2
PHF19
MAPKAPK3
CISH
TCF4
TIGD5
EEF1D
CBWD6
RER1
MORN1
UPP1
ARF3
C18orf32
HOXC6
BUD13
IFNGR1
NIBAN2
DDX23
FAM227B
FABP5
DTWD1
NCBP2AS2
NCBP2
ATAD3A
USP21
NOTCH2NLB
LRCH4
FBXO24
KIF1C
INCA1
CYB5R4
HPF1
TDP2
CNOT6
BHLHE40
ACOT13
NINJ2
RAP1GAP2
NUDT15
ARHGAP45
SYPL1
YY1AP1
DAP3
C12orf65
UBE2L3
RIMBP3C
RIMBP3B
ARHGEF18
PCMT1
AVL9
CDS2
NMNAT1
LZIC
CEP135
ASB1
SLC7A5
MYCBP2
TSPAN4
POLR2L
ATG5
CACYBP
CCNL1
SEH1L
PTDSS1
MTERF3
MFN2
ZCCHC24
GSPT1
ITPRIP
KRI1
EIF3D
C21orf91
SNUPN
LTB4R
LANCL2
UNK
ADORA2A
HYLS1
HOXC4
SREBF2
PSMF1
HMGCL
MTMR1
ZNF219
TBX3
RPLP1
RITA1
DDX54
GFER
ASH1L
GTF2H3
EIF2B1
BRAT1
CTSC
DISP3
TAS1R1
NOL9
UBIAD1
FDX1
IMPA1
CD63
USP34
TMEM199
POLDIP2
MAPK6
THUMPD3
DLX2
FNTA
SLC16A6
LAMP1
MT2A
KDM1A
NOC4L
DDX51
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
ARHGAP27
ARF4
ZFAND2A
MBD6
PDZD2
NREP
CARMIL1
BRAP
ACAD10
ATOH8
IL6R
POLD2
FKBP1A
ACVR1
EIF1B
PTK2B
LONRF3
PGD
RPS3
PGLS
RPL8
ATG101
TKFC
DDB1
HNRNPF
CHST11
ELOVL6
RCOR3
RIMBP3
GARS1
TMEM65
CDC42
FAF1
DNAH7
DYNC2H1
CSNK1A1
BOD1L1
GFUS
CNPY3
POU2F1
TRDMT1
GALE
DHRS4L2
DHRS4
WBP1L
DNAJB2
SPRY2
SMIM20
NCKAP5L
SMG6
RERE
FKBP5
EHD1
SPPL2A
UBE2K
PPIL4
CXXC4
MRPL20
MGST1
DENND4B
C6orf89
ABHD12
RCC2
ZBTB45
POLG
SNAPC5
PPP4R3B
TPP2
CCDC43
TBL3
ZC3H6
GPCPD1
RAC2
CBX5
PRKAB1
IPP
NUS1
ELMO1
FOS
NCBP3
RBSN
B3GALNT2
TMEM41A
SLC35A1
PTP4A2
GFRA1
CD93
TAF12
RAB11FIP1
INTS5
PSTPIP1
CLN5
MRPS28
ZNF593
RNF19A
RGS14
LRRC59
C1orf232
THYN1
RNF216
ETFA
ACAD8
DCP1A
TRAM1
PRR19
PAFAH1B3
PRKAG1
SPDYE14
SPDYE10P
PPP1R8
SPTBN5
SOX12
NDUFV1
MYADM
ZBTB12
MEIS2
MEIS3
FAM3C
STARD3
RBM15B
FADS2
FADS1
DRAP1
C11orf68
IQSEC1
ATXN2
SECISBP2L
MARCHF7
IDS
ABHD2
ZNF774
UHRF2
ABCF1
SNX15
LGALS1
WDR53
SEC13
FBXO45
CAP1
ARID1A
DTX2
DHDDS
RCN2
OSBPL3
DBI
CYP2W1
C2orf76
SLC43A3
MIDEAS
NOL4L
RAB3D
PSMD9
HPD
BIRC2
RUNX3
MT1G
RNF168
PURB
PLAGL1