ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: RUNX3 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◣ RUNX3: Average

◢ SRX190349: GM12878

◢ RUNX3: STRING

SPATA4
EXD2
SLC4A4
MGP
UTRN
WDR24
MRPS14
POLR3B
CD28
TTC5
BTRC
CD1A
CCDC59
MYOM3
NUF2
USP30
EIF1B
CCDC130
ZBTB20
STAP1
FAM8A1
CLUAP1
VTA1
NMBR
GTF2A2
MED23
PIGK
TMEM115
IPO4
MRPL16
PCDH1
MRPS23
DYNC1I2
NUP133
THUMPD3
CLDN12
KRR1
SUGCT
MPLKIP
TARS3
CHCHD3
NUFIP1
GPALPP1
CUEDC1
PLCXD2
EVI5
COMMD1
PPFIBP2
PLEKHA1
SNAP29
PI4KA
COPS4
CD36
ZNF529
COA6
TADA1
RGS1
MFF
HYLS1
C3orf86
GPR141
HIF1AN
ZKSCAN3
TMEM208
SIRT4
LRRC29
NCBP3
THAP10
LRRC49
MMS22L
WDCP
PROSER3
NPAS4
HSPB6
CLEC7A
GSPT1
SPTLC3
TRIM40
MAD2L1BP
VPS41
ACVR2A
RGL4
ZMYM4
GPN1
DSTYK
CCDC121
OXR1
TMBIM4
SNAPC3
PLEKHG1
GHRL
SC5D
EXPH5
DNAJC2
DHX8
SLFN12L
CD55
DPM2
DEF6
E2F4
CSTF2T
COX16
HELZ2
NSUN6
ARL5B
SNTB2
GTF2B
PRKCI
AFF3
HNRNPA1L2
SEC22B
HOPX
CCR1
RIN1
TMEM267
PAFAH2
GPR18
ACTR6
ZNF230
ARHGAP15
ZNF500
RANBP6
NR3C1
MOSPD3
NOS1AP
H4C4
COASY
WWOX
PDSS2
GRAP2
PCOTH
MIPEP
PTK2
BANK1
TRIP11
KBTBD6
KIF13A
CA13
NET1
SLC26A11
SGSH
PGAP1
NCOA7
MRPS22
ARL6IP1
TPM1
VPS72
MRPS18C
HELQ
CD101
GTPBP10
FRA10AC1
ARL14EP
RAD18
CCDC50
VPS29
RGS14
RAD9B
LRRC59
CSDE1
SHQ1
RFFL
TNFAIP8L2
ILF3
KLHL20
ZNF397
KDM3A
ERO1A
TTC21B
METTL15
KIF18A
CNTRL
ZNF350
AARS2
ELP3
TTC21A
GORASP1
ITFG2
WDR47
PIGX
CEP19
TTC33
TRIAP1
EIF2B5
CHFR
CANT1
ZNF302
DOHH
LY9
ZSCAN31
TPR
ODR4
FAM126A
ENPP2
ZKSCAN4
CHCHD2
APOBR
CYP51A1
COMMD2
CNTN1
ATP5MC2
SAXO1
RRAGA
ARIH2
TSACC
CCT3
TFPT
PRPF31
BRIX1
AKAP9
PRPF40B
PEX12
NAT10
LONP2
ABCC11
FKBP15
MEGF8
C5orf34
NSFL1C
CAND1
NBEAL2
RPA3
CTTN
ZNF501
RPL11
H6PD
RPS8
TFAM
PSMC3IP
FAF2
RNF139
REXO2
CRNKL1
CFAP61
SIRT1
SIKE1
NOXA1
ZBTB45
CFAP20
TMTC2
LGALS2
INTS10
TRIP4
CHRNA1
COX6C
LRRC34
SURF6
DPY19L4
RAB3GAP1
STAU1
FBXO8
CEP44
FOXJ3
CCDC30
HECTD1
LTA4H
SEMA4D
ATP5F1B
UBQLN4
SFXN5
LAMTOR2
SLC38A9
MICOS13
IFI16
HSD11B1L
EIF2B2
USH1G
TBL3
OTOP2
COPZ1
SDAD1
H4C3
TMEM229B
INTS12
GSTCD
PTPN22
COPS8
CCR5
CDADC1
TTLL12
DDX27
NLE1
LIN54
CCDC146
STK11IP
RBBP5
ABHD2
ZNRF1
ARHGAP30
POLR2C
TIMM17A
APTX
SPECC1
THOC1
CBLL1
CHPF2
ATP2C1
PRDM1
OGG1
GPR171
MS4A15
SPTY2D1
RAB4B
EXOSC9
PIGL
DYNC2LI1
RHEBL1
LOC645177
C2orf42
C12orf77
ZNF705E
TM2D1
GTF2F2
MZF1
ASAP1
ZFPL1
CDCA5
CARD8
DDX60
C12orf43
AP2S1
ECI1
SPATA6L
LILRB1
HSBP1L1
RRM2B
UTP11
ATG5
PSIP1
MRPL21
IGHMBP2
CBR4
FXR1
YIPF2
TIMM29
NME7
CCM2
BLZF1
ZFP3
MCC
SNRPB
ITGB3BP
EFCAB7
CD38
DYNC2H1
UBL5
TENT4B
ZNF148
GTF2H3
EIF2B1
DUS3L
RPL22
RBM18
NOTCH2
MRRF
NLRX1
TSG101
FAM234A
ZBTB43
CEP85L
SSH2
RPS3A
HSPA5
PLD3
STK19
DXO
NFKBIZ
CYB5R2
ZNF224
CHIC2
TBC1D19
EML2
CCDC9
AIM2
PDE2A
LATS1
FLCN
RAD54L2
BATF
ZC3HC1
RPS7
RBM25
MRPL53
WNT1
NELFA
SPATC1
SORBS1
GRHL3
KDM1A
TNPO1
IDH3B
EXOSC4
CYP20A1
TBCB
RPAIN
POLR2I
NUP88
NDUFA4
FLYWCH1
FAM118A
CCNI
SRSF5
STX18
LMNA
BIRC3
ZP3
ZNF106
SUCLG1
DMXL1
AMZ1
FAM185A
DYNLL1
NFX1
EPRS1
HILPDA
PPIL2
VIPAS39
TDRD7
AHSA1
ZCCHC9
PRND
KANSL3
INPP5B
WDR36
GBP6
ZNF225
WDR70
ARL5A
ATP6V0B
TMX4
TMBIM1
ZNF561
PPP6R3
OR2T1
ESR1
MTF2
ELF1
NDUFAF5
ESF1
CKAP5
MS4A6A
ZKSCAN2
ZNF181
NOTCH2NLC
ING4
SEC23B
RAD23A
NDUFB6
SMARCC1
RCC1
TCF4
PLEKHG6
MC1R
ABLIM1
NIBAN3
DHX36
CLPB
RGL2
PUM3
PALD1
MMUT
CENPQ
MGAT1
ZNF3
SYNPO2L
HTR1A
ERP29
MIS18A
HMGCL
TIMMDC1
ADIPOR2
NDUFA2
IK
HECTD4
SKA2
PRR11
NCF1
DARS1
TNFRSF14
MRPL3
KANSL2
GSK3B
COG7
CCDC97
PPIL3
NIF3L1
ZNHIT1
SPRYD4
PLOD3
HTR5A
NOTCH2NLB
FASTKD1
CCT8
RPP14
HTD2
ABCB6
KAT7
EXD1
DPP9
CHP1
AP2B1
TMEM9B
PTPN4
PREPL
CAMKMT
DHTKD1
C5orf51
PPA2
PMCH
AP1G1
PRPSAP1
PPP1R16B
NBPF11
CLASP2
C8orf37
TMEM33
CCDC114
SF3A3
RPA2
PLEKHM3
CLEC16A
TES
SF3B5
NUDT7
SNRNP48
NDFIP2
LUC7L2
GCFC2
FMC1-LUC7L2
FMC1
GRIK4
CCNL1
NFE2L1
SRSF10
FHIT
FAM76B
CEP57
STYK1
CWF19L2
RTTN
RARG
SNRNP70
B3GALNT2
SELENOI
NAA35
DNAJC19
ADGRF3
HDAC9
EGR2
DRAP1
C11orf68
SCARF1
ITGAX
FNTA
DYM
TICAM2
NUP214
MTIF2
CDK14
ARMC1
RFC2
TM9SF1
GCNT1
TRMT10A
TOMM5
MTTP
ETFRF1
DEGS1
CFAP94
RPL31
RMND1
IDO1
CD160
ARMT1
TSFM
DCP1B
RAB43
WDR77
NFKB2
DDX23
ATP5PB
TRMT6
MCM8
H4C5
RAD51
NUCB2
GPR68
CMTM6
MTLN
ZSCAN12
RACGAP1
PRPF18
TRIM46
KRTCAP2
HSH2D
TJP2
RPL29
PIGBOS1
PIGB
INSC
ZNF599
SUCLG2
YARS1
DOCK10
CTNNAL1
SHBG
SAT2
RTRAF
NBR1
CCDC117
TP63
NUDCD1
UPF2
RNASE6
NOTCH2NLA
CIAO2B
CES2
RHBDL3
TMEM71
TMEM266
PHF20L1
CCDC15
ZNF335
CREBZF
CD86
TNPO2
TIMM22
PIKFYVE
F2RL3
CETN3
PRKRA
PJVK
AMBRA1
ZNF596
HUS1
HMGN4
CAP1
SLX4IP
SLC33A1
SEPTIN9
PARVB
FKBPL
ZNF692
TESPA1
ZNF443
MEF2C
DCLRE1B
AP4B1
AARSD1
SLC14A2
DYNLRB2
CEP192
PPARD
NSA2
GFM2
TPST1
POFUT2
PMFBP1
DPP8
BTLA
ALCAM
ZNF785
NIP7
GALNT3
FCRL5
CTNNBL1
COG8
POLI
PCYT1A
ATP2B4
RTEL1
H2BC4
H2AC6
TAB1
VWA7
ICE2
KAZN
CEP20
CCL3L3
CCL3L1
CCL3
PKN2
OCIAD1
WNK1
SETMAR
H2AZ2
NUP54
CHCHD1
PRKAB2
CHD1L
TYW3
TMEM260
TAF15
CRYZ
WIPF1
ELOF1
ANKRD13D
HARBI1
ATG13
CNPY3
USP22
CST3
TECR
DNAJB1
CLN5
NANOS1
NHEJ1
RNF125
RMDN2
AKR1B1
MFSD4B
CTSC
RPL39L
PPM1M
SLC14A1
RPL18A
GTPBP3
ANO8
KIFBP
HEY1
ASNS
ZNF101
SPRING1
RNFT2
DGKD
CNOT4
ASNSD1
ASDURF
TNRC6B
RASGRF1
NUP153
SLC41A3
TNFRSF21
STYXL1
FAM204A
ENTPD6
PJA2
MAP1LC3B2
ESCO1
CHKA
API5
IL18RAP
ACKR3
KCNJ1
FGF2
STING1
PRDX1
PGS1
LACC1
IL10RA
CCDC122
SGO2
NME1-NME2
NME1
COPB1
ITGA4
ATAD2B
SLFN13
PSMA3
AMPD3
RAD52
LAMP3
ZNF573
LYRM4
FARS2
CUTC
COX15
STAT1
GZF1
BRAP
ACAD10
ZNF669
MPV17
FRK
BDP1
RNGTT
RBM43
NUDT9
SMARCC2
STAT3
GALM
ZNF23
SPHK2
SLC3A2
RPL18
UBAC1
RUFY3
PSMD9
PON1
HPD
MRPS31
ARID5A
ZBTB5
DCT
C16orf54
LIMS1
AGO3
RBSN
RBM48
PEX1
DNAJC15
CYTH2
TACO1
CD69
MYL12A
ZPR1
SMG6
RWDD2A
PIK3CA
PGM3
H2BC10
SMPD1
NBPF15
ZNF628
POLDIP3
DCAF10
TMEM97
MRPS24
STX16
PIH1D2
NKAPD1
LRRC43
SAC3D1
FAM135A
LY96
CDK12
WASHC2A
ACSL1
TTC8
TICAM1
CASP8
RTF2
UGGT2
TMEM248
PEAK1
HMG20A
CCNT1
ANAPC5
H4C6
NRDE2
TMEM237
EEF1AKMT1
EDC4
NRDC
SLC29A3
SFT2D3
INTS4
ERCC5
DUS1L
CEP295
CARMIL1
TRAK2
STRADB
BRF2
TBC1D22A
NEIL3
NDUFC2-KCTD14
NDUFC2
EVI2A
RPL10A
PNPO
CORO6
CDC37L1
NDUFS5
NINJ1
LAMTOR5
CFAP298-TCP10L
CFAP298
TRAF3IP3
TMEM131
IRAG2
EID2
CCNA2
RASSF2
SMAD4
EIF4ENIF1
DENND4A
PSMC3
TRIM38
SNX15
SKI
H4C15
H4C14
BOD1L1
ZC3H6
IMPA1
ZNF484
TNFRSF10C
MRPL45
MYO16
HIP1R
CTSZ
ABL1
TBCK
AIMP1
NAA16
MTRF1
CFAP69
C1orf194
BTF3L4
GPANK1
GLIPR1L2
CSNK2B
NAGLU
VPS8
GLRX5
GABPB1
CD59
SRGN
RPL22L1
POLR1B
CCL25
TMEM147
RFX7
PLS1
ALG10B
RPL5
MX2
ANKRD13C
ZNF875
SMG1
PPM1A
ZNF391
NOC4L
DDX51
CRTC2
SERF2
ELL3
TXLNB
H2BC11
H2AC11
ZNF221
USP7
TIAL1
PDE6D
NOL8
COPS7B
CENPP
ZSCAN23
UTP25
LSM5
RPTOR
DIPK2A
CAAP1
ARHGAP45
TMEM256
MRPL1
CDK5RAP1
RETSAT
NECAP2
TSR3
TACC1
SLC39A8
GNPTG
SSBP1
CALCOCO1
SELENOH
RPS26
ARHGAP17
USO1
PGBD4
IL4I1
EMC7
RTCA
RPS29
CCDC174
USP15
TMCO1
WDR5B
NOTCH4
CEBPZ
PRADC1
DNAI3
CCT7
ZNF200
RANBP2
DBNDD1
TMEM19
RBIS
DMAP1
UTP23
WDR41
CLIC1
GAN
WASHC2C
EYA3
WNT5B
USP16
RUNX3
PRMT3
MICAL1
CNDP2
ATG4C
SYTL3
SYPL1
GNA13
C1orf127
ZFP69B
TIPARP
RNFT1