ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX682379 | TSU-1621MT
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX3584302: iPS derived chondrocytes

◢ SRX3584303: iPS derived chondrocytes

◢ SRX3584304: iPS derived chondrocytes

◢ SRX3584305: iPS derived chondrocytes

◢ SRX3584306: iPS derived chondrocytes

◢ SRX3584307: iPS derived chondrocytes

◢ SRX3584308: iPS derived chondrocytes

◢ SRX3584309: iPS derived chondrocytes

◢ SRX3584310: iPS derived chondrocytes

◢ SRX3584311: iPS derived chondrocytes

◢ SRX3584312: iPS derived chondrocytes

◢ SRX3584313: iPS derived chondrocytes

◢ SRX6039037: iPS derived chondrocytes

◢ SRX6039038: iPS derived chondrocytes

◢ SRX6039039: iPS derived chondrocytes

◢ SRX6039040: iPS derived chondrocytes

◢ SRX6039041: iPS derived chondrocytes

◢ SRX6039042: iPS derived chondrocytes

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◣ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ARSG
INAFM2
PARK7
CCDC88A
ARID5A
DIAPH1
GRHL3
CCPG1
C15orf65
USP15
POR
SLCO4C1
IQCH
AAGAB
SPATC1L
RASSF2
C11orf24
MRPL34
PPIB
NDUFA4
MTMR4
TRAF4
NDFIP2
BIN2
WNT10B
PLEKHO2
KAZALD1
CYCS
FGR
MRPL38
SKIV2L
NELFE
ZCCHC3
KCTD6
ADCY7
RNF149
LNPEP
NBPF1
IFRD2
NBEAL2
SRPRA
TMEM222
SH3BP2
KCNAB2
RASSF5
HEBP2
SNX3
TRMT6
MCM8
MRPS24
DYNLL1
FAM110A
MAP2K1
JAK3
TBRG4
FAF2
MTCH1
THRAP3
SSX2IP
SNAPC3
CCDC114
SLC39A13
SLC35E2B
CDCA7L
ZNF76
NOTCH2NLA
GPR108
ATP23
TRERF1
DUSP6
RWDD2A
PGM3
DGAT2
PRKDC
MCM4
PEX3
ADAT2
POLR2J3
VAV1
NOTCH2NLC
ATAD3B
ATG16L2
CTTN
PRDM10
SLC35E2A
PIP4P2
KCNH2
ZDHHC4
VPS37C
C1orf159
KMT2A
NOTCH2
PRDM1
SH3TC1
TIGD5
EEF1D
RER1
MORN1
RFESD
ZNF25
BUD13
FAM227B
DTWD1
NCBP2AS2
NCBP2
ATAD3A
USP21
DENND2D
ASNS
NOTCH2NLB
KIF1C
INCA1
RAD50
HPF1
RPS6KA1
TDP2
CNOT6
ACOT13
DPP9
CD164
RNF139
RNF125
YY1AP1
DAP3
UBE2L3
RIMBP3C
RIMBP3B
IL21R
UBL7
PKM
MYCBP2
AKIRIN1
CFD
PTDSS1
MTERF3
MRTO4
EMC1
C21orf91
RMND5A
RNF103-CHMP3
LANCL2
HMGCL
MAGEF1
MTMR1
RITA1
DDX54
ASH1L
GTF2H3
EIF2B1
BRAT1
DISP3
RXRA
TAS1R1
NOL9
UBIAD1
TMEM199
POLDIP2
MAPK6
DDX23
DLX2
SBNO2
FNTA
C18orf32
CEP135
NOC4L
DDX51
ZFAND2A
CARMIL1
BRAP
ACAD10
ARF3
IL6R
GSPT1
FKBP1A
SEC14L1
CLIC4
RPS3
C12orf65
IQGAP2
RPL8
TKFC
DDB1
CHST11
ZNF219
MAPKAPK3
CISH
NMNAT1
LZIC
TSPAN4
POLR2L
FCHSD2
RIMBP3
TMEM65
FAF1
DYNC2H1
PCMT1
GALE
PPIL4
MRPL20
C6orf89
RCC2
HYLS1
SNAPC5
PDE4D
ZNF318
PPP4R3B
CLTC
TBL3
ZBTB17
RAC2
PRKAB1
PSMF1
NUS1
ARF4
FOS
RBSN
USP42
TMEM41A
CMTR1
CLN5
MAPKAPK5
RGS14
CTSC
RNF216
TRAM1
PRR19
PAFAH1B3
MT2A
PRKAG1
PPP1R8
BOD1L1
SPTBN5
NDUFV1
LSM5
AVL9
GARS1
ZBTB12
STARD3
ATG101
CDC42
ARHGAP27
IQSEC1
IDS
ZNF774
ABCF1
USPL1
HMGB1
FXYD2
WDR53
SEC13
FBXO45
DTX2
DHDDS
CBFA2T3
RCN2
RERE
SDE2
MT1G
CBWD5
CBWD3
CBWD6
ADPGK
TRNAU1AP
EXD1
CHP1
FAM120B
TESMIN
ABHD12
TPP2
RNF34
HBS1L
NFKBIA
RFC2
GFUS
ZC3H6
RNF19A
B3GALNT2
MC1R
MCU
CCNDBP1
HUS1
TCTE3
ERMARD
THYN1
ACAD8
CCNL2
PHF13
EHD1
ZFPL1
CDCA5
SLC35A1
TMEM230
MESD
EIF3B
EIF1B
RPLP1
DHRS4L2
DHRS4
TAF15
TAF12
ZZZ3
PCNA
DCP1A
PIK3AP1
PEAK3
RWDD1
SNAP29
PI4KA
GZF1
ZCCHC4
IGFBP6
PSMD12
TRIAP1
FBXL18
RANBP3
HTRA2
C15orf40
SPRY2
GTF2H2C
GTF2H2C_2
VPS36
CCNL1
TNPO1
UNK
ATG5
FANCE
POLR2J
SDF4
B3GALT6
YTHDF2
POLG
PSTPIP1
ZNF202
CRLS1
LAMP1
F2RL3
VPS37A
RPS6KB2
RB1
CNOT7
REXO1
PPP1R18
TCF12
STAT1
ETFA
NCKAP5L
FAM76B
EEF2
CEP57
ADAM17
PGK1
RGS16
HES1
MARCHF7
RMDN3
MFN2
DBI
C2orf76
PGD
ZNF277
DOCK4
UGGT2
SCAF1
COMMD1
CCT4
ARL4A
RPS28
NDUFA7
FDX1
INTS1
CHAMP1
UBOX5
FASTKD5
EXOSC10
BRIX1
RPL39L
SLC43A3
FRAT2
SACM1L
PSMD6
SMIM14
CSRNP2
TAF1B
UBE2K
SOD2
SIRT6
ANKRD24
IPP
LSM2
IMP3
SP7
LRRC59
FADS2
FADS1
ARIH1
CD63
CAP1
ASB1
PKNOX1
ZNF554
THOC3
PNRC1
PLAG1
CHCHD7
STK38
ZNF436
DNMT1
SNUPN
CSGALNACT2
TXNDC15
NREP
SYNRG
C6orf226
SMAP1
ADORA2A
RPL10A
NSFL1C
PDAP1
BUD31
DNAJB2
MSH3
DHFR
CCZ1
MIA2
DDX46
RAB1A
SLC16A6
CNPY3
SF3B2
ARL8B
STRADA
TRMT61B
ORMDL3
LRRC37A3
SYPL1
PURB
FOXN2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SPDYE14
SPDYE10P
COPS8
RMC1
DSCC1
ATL3
GTF2H2
NXF1
GTF2A2
MYL12B
STAU2
NOC2L
CHPF2
GMCL1
GCFC2
CCZ1B
ANKRD36C
RPS16
RPS15
MTRES1
AP5Z1
TAF5
TMEM217
TBC1D22B
MANF
CHMP7
AP4E1
FADD
F8A3
F8A2
F8A1
F8
RNF141
GNA13
NFU1
CYB5R4
ZC3H3
SSR3
SPRYD4
KAT8
KAT5
H1-4
GET4
TMOD3
DOHH
GPSM3
WDR27
C6orf120
MAD1L1
USP32
MTF2
MTHFD1L
ZNF451
DNAJC11
CCM2
ACAD9
BIRC2
DDX19B
AARS1
MAN2C1
NBN
ARID1A
ZBTB2
POLR1F
RBM15B
SNX17
RPL35
EIF2B4
ARPC5L
KIF23
MIB2
ARPP19
RARS2
ORC3
FAM53C
CDC25C
MSANTD2
DTNBP1
SPPL2A
STX11
RPUSD4
ME3
FLCN
FAM118B
PSMD11
SDHB
GPAT3
SYNJ1
ZNF593
C1orf232
RTN4
UCKL1
WASF2
PHF19
SELENOW
AMACR
C15orf39
FAM133B
MALSU1
NELFA
C5orf51
MALT1
METTL23
JMJD6
TRMT44
PGM2
ACOX3
ZCWPW2
FAM91A1
CDIPT
AZI2
PGLS
SH3BGRL3
SNX1
SETX
ANKRD13D
OSBPL3
SAXO2
OST4
EFL1
MT1E
UNC50
GLYCTK
COA5
WDR61
CFL1
P4HB
MARCHF3
ICE2
FANCD2
CDK11A
TIPARP
AURKAIP1
PSMD3
WDTC1
AMD1
CCDC134
ZYG11B
IFNGR1
KATNA1
MYLIP
MTHFR
CLCN6
TMEM127
RMDN1
CIAO1
PGS1
ANKRD36B
STMN1
UBE2Q1
RLF
LATS1
UPF3A
FBXO22
ZNF414
RUNX3
UCHL5
RO60
POLR2M
TRIM13
PIKFYVE
ZBTB8OS
RBBP4
NRROS
TASOR
RPN2
RNF14
MROH8
UBA52
ADPRS
LIG4
ABHD13
DPP8
WTAP
CASC3
GABPB1
OTULIN
ARHGEF39
KCTD5
C11orf97
NCOA3
PSMD9
HPD
PCTP
ZNF696
ZMAT3
BCKDHB
PHF6
FAM207A
FUNDC2
DGAT1
AP5S1
ARHGAP23
NME6
KLHL7
RRAGC
GTF2I
CARHSP1
GSTP1
HDAC1
PSMG3
MUL1
PTP4A2
IST1
WDR25
WARS1
FLOT1
CLYBL
PSPH
CCT6A
NFRKB
MAP2K5
LONP1
CATSPERD
TMEM60
PHTF2
NGRN
TGIF1
CEP112
HOXC5
ZNF740
CSAD
HSPE1-MOB4
HSPE1
HSPD1
USP3
TOE1
MUTYH
MIDEAS
EFCAB14
ZBTB9
KPTN
TRMT2A
RANBP1
CUL7
EFCAB13
ECI1
LRRC47
MLLT11
CDC42SE1
MINDY2
SNRNP200
RPP21
GPCPD1
RAB3D
OGDH
CRBN
ZBED4
CAPN15
PDIK1L
CDC42SE2
OVCA2
CCDC88B
USP4
WASL
FBXO41
TIMM44
ABHD16A
NAA40
IER5
UHRF2
WDR18
HDAC2
ABCF2
TBC1D14
MNS1
TEFM
MPC1
TUBGCP3
ATR
SNX19
HMGN2
BTBD1
BZW2
ANKMY2
MRPS15
RPL36
POLE4
FBXO43
LUC7L
TFRC
GGCX
CPT2
SPAG4
PSMD8
MRPL4
CHIC2
TSN
MARCHF6
ARMC2
URGCP
UBE2D4
ZBTB40
NOM1
HNRNPF
CYP4V2
WDR70
ID2
LCE3A
NOL11
PRRC2A
PBRM1
GNL3
CEP164
BHLHE40
LGALS1
PC
MED4
NIBAN2
POLR3D
KAT2B
INTS8
ESYT1
CDKN2AIPNL
MICU2
PPP1CC
ERMP1
WDR73
FAM111A
LONRF3
PIGU
PHLDA1
TMEM50A
FAM222A
GTF2IRD2B
SNX12
CAPRIN2
PA2G4
DGKZ
FKBP5
KLLN
PTEN
APMAP
GOSR2
MLEC
RNF168
AGO3
SGK1
SLC43A1
CASTOR2
PPP5D1
MAN2B2
CALM3
DIABLO
SRSF2
MFSD11
UFL1
NUDT1
NUDC
MRM2
CBWD1
ZBTB45
TMTC4
YKT6
DNAH7
TARDBP
POLR2J2
DOCK2
HNRNPM
CIPC
STMP1
TMED2
MON2
LRCH3
MED23
ANKRD36
ITGB1BP1
IPPK
CPSF3
CHMP4B
RNASEH2C
ATP5MG
UBE2Z
NABP2
MFSD4B
LRCH4
FBXO24
MDN1
FIBP
SLC24A1
INTS14
TMEM39B
TXNL1
TAB2
MKS1
ZNF397
ACTR3
HEXIM2
NDRG1
TMEM248
HSPA8
GADD45B
CEP43
ACAT1
DPY19L4
PIK3CD
GTF3C6
CLPP
EXOSC4
ELMO1
FOSL1
BRWD1
CEP170
TTC9C
SDCCAG8
HNRNPUL2
ATP6V0A2
VCPKMT
TOMM22
RAB5IF
EIF2AK1
VOPP1
FES
MRPL58
C8orf76
YARS1
S100PBP
ATAD2B
TGDS
NIPA2
VPS37B
TMEM30A
CLCC1
HNRNPD
PDCD2
GORASP2
USP19
R3HDM2
CEP85
NINJ2
ZNF721
PIGG
N6AMT1
SUSD1
SUB1
KCTD2
ATP5PD
LTV1
MT1F
TPT1
MVK
THUMPD3
PRKAR1B
PPT1
RPL29
TIGD6
NRDC
HMGXB3
VPS13C
USP48
ZFAND3
NTMT1
EED
ANAPC11
ALYREF
TRA2B
SRM
TIMM50
SMIM12
MAPK14
ACER2
CENPH
PFKM
SENP1
FAM219B
NUP214
KDM1A
PARL
ZNF584
TCEA2
H2AX
CENPS-CORT
CENPS
UPP1
CLP1
TTC17
RBM6
NAA16
MTRF1
CMTM6
TRAPPC3
CIAO3
RPAP3
APC
TCTEX1D2
ZNF623
ATP6V1H
RPS10-NUDT3
RPS10
ZNF212
TBKBP1
FAM102B
CUL4B
SLC35A4
APBB3
MPHOSPH10
MCEE
FBXW2
COMMD8
CARS1
RESF1
UQCRC1
UBR4
CSNK1D
KEAP1
DENND4B
PDCD7
STK35
TNIP1
MDM4
CEP83
BICD2
BCDIN3D
ENO1
CEP120
DCAF8
RAB5C
IPO13
TFAM
DMXL2
SESN2
USP33
METTL6
MAPK1IP1L
EAF1
EFTUD2
CCDC103
EIF4A1
KMT2C
GGA1
STK17A
CD38
KRI1
USP36
HNRNPH1
PNPLA6
JAGN1
FAM193A
SPNS1
TSTD3
SELENOH
METTL9
FAM214A
ANXA6
CSNK1A1
TAX1BP1
RALA
POMZP3
MPI
WRAP73
UBXN2B
ARIH2
LDHA
WASHC4
CAPZA2
GOLGA1
C2orf42
ECSIT
RCBTB2
PPP1R12A