ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
KCNJ15
ZNF436
OBSCN
CYB5R4
SMCO1
GTPBP6
ZNF550
BSDC1
ITGB3BP
EFCAB7
APOC3
APOA1
ZWINT
ZNF555
MID2
C19orf18
WDR33
ZNHIT6
ZSCAN32
ZNF174
FGD3
IFNAR2
ZNF514
ZNF24
TSPAN5
AADACL4
DEGS2
INKA2
DDX20
SRPRB
SMYD3
YPEL3
TBX6
AKR7A3
LDHD
KRBA1
TTLL1
UBE2F
ZSCAN31
RRAGB
SNX11
CBX1
ZNF134
F2RL3
ZFP30
MTRNR2L8
OPRL1
RGS19
LKAAEAR1
ZBTB26
RABGAP1
STC1
SELENBP1
UQCRC1
TMEM89
RABGAP1L
ZNF829
ZNF568
DISP1
SAMD14
CPLX1
MRPL55
KAT6B
MAPRE2
ZNF32
ZNF572
LCN8
LCN15
LCN6
GBA
NXPE4
DNAJC25-GNG10
DNAJC25
TMEM161A
TBC1D22A
PDE11A
FRMPD4
ZNF623
IL22RA2
SAMD4B
GMFG
ANO9
PTDSS2
EDF1
ST20-MTHFS
TSKU
COMMD2
KRTAP5-2
KRTAP5-1
PRSS38
MTF2
COL23A1
SF3A3
ZNF433
ZNF878
CRLF2
ZNF891
ZNF10
YWHAQ
DUSP6
DHRS2
ZNF527
ZNF3
ZNF501
ZNF502
RBBP5
RPL12
LRSAM1
RNF187
GRAMD4
PTPRN2
TMEM229B
NUF2
COX16
CDCA7
CANT1
C1QTNF1
DBNDD2
NKX1-1
COL18A1
MROH7
ZNF300
NT5C3A
UTP3
ZNF792
GTPBP4
ABLIM2
CLTB
GLT6D1
IER3IP1
TBC1D19
ZNF292
FN3K
TEAD2
DKKL1
CFHR4
YY1AP1
DAP3
GPR35
PRKACB
ZNF726
TMEM109
TMEM132A
ZNF404
GALNT1
ATP5MC2
PXDN
PRAMEF1
ZNFX1
MYOG
TMEM41A
ZNF566
ATP5F1B
ZSCAN22
EIF4A3
ATP5MF-PTCD1
ATP5MF
CRYAA2
CRYAA
ZNF83
ZNF426
ID2
MMEL1
RPS7
LOC100289561
NRARP
TRMT5
SLC38A6
GCNT7
FAM209A
TOMM20
IGFALS
PRRT1B
ACTL8
ANP32D
RTP5
SOD2
WTAP
TRIP4
PCLAF
VARS2
GTF2H4
HTR5A
C10orf143
RNF125
MRPS33
SUCLG1
RWDD1
CCDC174
SSBP1
ZNF772
MAN2A1
EPHA3
RPIA
PHGDH
TSFM
EEF1AKMT3
GPRC5C
TTI2
TLE7
ATP1A1
CAT
RERE
CEP85L
GPBP1
NEMF
SELENOH
ZBED9
SLC28A2
SLC1A7
NTSR2
NDUFB3
FAM126B
NUDT14
PLA2G4E
SLC24A1
INTS14
MIPOL1
ZNF416
ZNF165
MED23
ENPP3
ZNF570
ZNF569
SNX20
ZNF75D
CWC25
C4B_2
C4B
LOC110384692
C4A
MRPL1
ARHGAP39
ZNF662
GLIPR1L2
VPS13D
ACTRT3
MYNN
MAST4
ZNF117
PEX3
ADAT2
AP3S2
CAPN11
ZSCAN18
PDE1A
SLC43A2
DPYSL2
PNMA2
BMS1
GTF2H2C_2
GTF2H2C
GALNTL5
SLC45A4
BRAP
ACAD10
ZBTB8B
LARP1
LMBR1
P2RX2
LRCOL1
NBPF1
TTC26
TIGD2
PAXBP1
EPB41L2
MNAT1
MLPH
MKLN1
C1orf159
DMAP1
MTR
TNXB
FBXW7
ZNF790
YJU2
ZNF350
OSGIN1
NOX5
ZNF614
PPRC1
ITSN1
CRYZL1
PEX7
TMEM242
CDC5L
PNPLA7
MRPL41
FAM71E1
MAMDC2
PNMA3
B3GNTL1
ZNF879
RAB18
TXLNB
SUMO3
JMJD1C
TESK2
MMACHC
CCDC163
NR1H3
ACP2
CCL24
LRRC49
THAP10
SERPINA3
FAM184A
RBBP9
FGFBP3
MMS22L
SNRPE
FAM13A
C2orf88
IFIT1
CFAP298-TCP10L
CFAP298
CAPN8
PLAGL1
C2orf69
PDCD6IP
SMG7
NDUFS7
KDM3A
DNAJB12
SIKE1
COX6A1
CCDC130
TTC32
TDP2
ACOT13
HDAC2
TMEM14C
TFF1
TFF2
FDX1
FRA10AC1
CYP46A1
PAFAH2
RAB30
POM121
PPIH
FAM193B
BANP
MRPS18C
HELQ
RAB5IF
GCGR
TMEM44
NARS2
ERN2
CDT1
APRT
TATDN2
TLR2
NME1-NME2
NME1
CYC1
GPAA1
EXOSC4
DNM1L
NEU1
RNF217
ZSCAN30
ZNF226
RSU1
ZMPSTE24
TMCO2
CCDC59
MRPL48
ZNF135
CALCRL
HSPA6
CHCHD6
PER3
ZNF594
FAIM
ZNF454
TEDC1
CRIP1
CRIP2
SKP2
LMBRD2
TFPT
PRPF31
TARS3
IARS1
REEP3
MS4A10
PDGFD
EIF2D
SLC33A1
SEMA3D
GABPB2
TMEM208
LRRC29
HECTD4
RUNDC3B
MSH3
DHFR
MTRNR2L2
PARK7
ZNF391
SAMD7
PRRG2
NOSIP
WDR70
NUP155
RANBP2
BPIFB3
ACP6
RCAN1
RIOK2
MANEA
POLR3B
CD14
POLDIP3
SLITRK5
LRFN3
LURAP1L
TMEM38A
SMIM7
RPL27
IFI35
ZNF571
ZNF540
POMGNT1
LURAP1
EXOC6
MACROD1
PUS10
PEX13
KANSL3
FER1L5
RBM45
CLEC18A
DUX4
RTTN
SPANXC
ZBTB33
TPM4
PNPO
DEK
SIT1
MRPS14
HAX1
CCDC107
ARHGEF39
TRMO
SLC30A7
EXTL2
STAT3
NECAP2
LIMK1
BORCS6
SYNPO2
ZNF687
WDR11
PDXK
MRPS23
SMIM13
TMEM259
CNN2
CTAG1B
CTAG1A
RPS29
SPANXB1
CD2
TACO1
CYP4F22
MT1HL1
THUMPD1
GORASP2
SMIM31
SAR1B
PKIB
SERINC1
GALK2
CCNC
SNRPD1
COPS2
CCNB1IP1
PARP2
ATP6V0E2
MMP8
ZNF708
ZNF491
ZNF440
FAM120B
TMEM43
CHCHD4
RPS3A
MYH2
DCP1A
TEFM
BAIAP2
OR1F12
SURF2
SURF1
RPL7A
MED22
GOSR1
DDX43
HEXA
STOML2
FAM214B
PIGO
SLC25A53
FAM199X
RPA2
ZBTB8OS
RBBP4
ZNF354A
TM9SF3
METTL8
DCAF17
NCOA7
GTPBP3
ANO8
RIF1
TIGD1
EIF4E2
ZNF791
ZNF490
MYO1H
TRAF3IP3
RPS14
RPL5
SAMD1
C19orf67
SLC35B4
TTLL12
TMEM125
EPB41
STAT1
LBP
TMPRSS12
MOB4
TBL1X
SGMS2
AMD1
CDK19
EP400
SLC3A2
VPS45
FAM174A
CACNA1H
REXO4
ADAMTS13
CUL5
ZNF20
DCT
E2F2
C1orf105
PIGC
RRP1
ZNF324B
ZNF132
BORCS7
TM9SF2
TEX50
STX16
NME4
DECR2
PGAP6
RPS13
ECHDC1
SLAIN1
ZNF285
SULT1C2
DIO2
AURKAIP1
DCLRE1B
AP4B1
INTS2
SLC2A8
CCNL1
KRTAP13-3
GYG2
SLC6A18
ARHGEF16
METTL7A
ZNF613
DSTYK
EPRS1
AFAP1
SCAMP2
PRKCZ
EFHD1
CLPTM1
APOC2
SNCG
MMRN2
MRPL40
HIRA
NUP54
PIH1D2
NKAPD1
NUP107
SLC25A16
NECAB2
RNF148
RNF133
MAP3K4
MYLK
MSRA
EFHD2
LRP6
SIPA1L2
SF3B5
RPL27A
ZKSCAN7
STX18
KCNMA1
DRG2
REN
MIER1
DNAI4
FAM13B
THEM4
EIF3F
COX7A2
IL36B
IL36RN
SLC35A3
POLG
MRS2
HACD2
SPACA3
SDR42E1
LUC7L2
FMC1-LUC7L2
FMC1
ATL1
ZNF385A
POLR1F
EXO1
FKBP9
RPL37
CARD6
ST6GALNAC6
IQGAP1
ZNF383
ZNF585B
PCDH15
IGFL3
PDP1
TMCC1
NOS3
NOP16
HIGD2A
RTL10
GNB1L
SPATA18
PLA2R1
NRL
DCAF11
PPIP5K2
GIN1
MITD1
CDC73
ZNF841
COPS4
HECTD1
IRAK2
MINDY3
PSMD8
ZMYND8
KRR1
TOGARAM1
KLHL28
SARS2
MRPS12
TMEM107
CLDN16
DYNLRB2
FBXO44
TTC3
FBXO2
PKLR
FDPS
ACTRT2
APOBEC3B
COMT
TXNRD2
WDR36
TAF12
SGPP1
TGFBR2
TRUB1
TRIM46
KRTCAP2
GPR137
SUPT3H
TTC7B
N6AMT1
PKP3
GOLPH3L
ST3GAL5
ARHGAP45
TYW3
CRYZ
ALG10
KRTAP10-9
MTMR9
CLEC18B
CHEK1
MOB1A
CNPY1
IFI6
SMIM12
SPRR2F
RRN3
MFSD8
ABHD18
HIGD2B
BBS4
HAPLN2
PIP4P1
OSGEP
APEX1
PXMP2
POLE
CDKL2
ZBTB44
ACYP2
SLC2A7
CDK5RAP1
GSTA4
USP21
NOL12
RNF39
PPP1R11
POLR1H
PPOX
RPS12
TCHH
AFG1L
ZBTB22
TAPBP
DAXX
SMIM40
GPR89A
OAZ3
MRPL9
CCDC97
LGR5
IFNAR1
DOK3
DDX41
ATG5
STXBP3
TRMT11
LAMTOR5
CCDC120
PPIG
ELAC1
NARF
CYBC1
PDCD7
TAS2R39
PHRF1
SLTM
LRRC59
ZNF263
GRPEL2
TPR
ODR4
UBOX5
FASTKD5
FANCC
GABPA
ATP5PF
HMOX2
CCDC33
NMRAL1
TMEM106B
SPG7
ZNF793
PFKP
RPL39L
LRP5L
ZNF561
SRP9
ITFG2
PHIP
PRDM1
HIPK1
FOXO3B
GPN2
FOXP1
METTL9
DDX46
TMEM72
GABRR2
CSNK1E
PRDX6
LRP5
TM9SF1
IPO4
ADNP
ZNF56
TNPO3
ABCB10
PNISR
ETNK1
P2RX6
UBR2
FCGR3A
POLR3G
MBLAC2
H2BU1
H2AW
LRP3
RGS18
ZNF443
SUPT7L
SLC4A1AP
LPIN1
PES1
CCDC200
LOC102724265
HP
ZNF846
DCP1B
LOC100129484
MICU2
TNRC18
TAAR5
SPATA33
LMTK2
BRF2
PLK2
SEL1L
HEATR1
WBP1
INO80B
B4GALNT2
TAF4
SYT1
DCAF8
USP45
TSTD3
TCTE3
ERMARD
CLN5
CHRNE
C17orf107
SNX14
SYNCRIP
CHIT1
OR4K17
RAB37
TMEM262
ATF7IP
TSEN15
WDR74
STX5
ARID1A
GDNF
TRDMT1
PLS1
SLC25A21
SLC2A4
SRP54
ACY3
SAP130
UBE2D3
CISD2
C3orf14
HMGB1
USPL1
ZKSCAN3
ZSCAN25
GOLGA5
SSTR5
ELFN2
HBS1L
EIF3D
SLC25A44
ADCY10
MRPS16
LIMS2
CNIH4
MTIF2
DHX16
ALG14
ALDH9A1
NUP205
PSMD11
TMEM116
ERP29
VPS26C
C6orf47
BAG6
APOM
SLC30A5
SULT1C3
FGL2
MAD1L1
TXN2
CPPED1
ATG4C
IRAK1BP1
ABCA3
VPS35L
RIMBP3C
RIMBP3B
ZCWPW2
AZI2
LGALS8
IST1
KLHL32
DPYSL3
WBP11
C12orf60
MRLN
CALD1
C8orf37
ZNF189
MRPL50
TIAM1
CRNKL1
CFAP61
DEDD
CYCS
CHD1
ZNF143
FAM234B
TMEM222
PPDPF
RIPPLY2
ANKRD36B
ZNF783
SPON2
UFL1
MRPL24
VAX1
INPP4B
AQP4
SLC17A5
DHTKD1
IMP4
CCDC115
SULT2A1
TGM6
SYF2
ZNF335
RSRP1
BOD1L1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
RSL24D1
SMAD3
DNAJC19
C11orf65
ASCC1
ANAPC16
ENG
MED18
IRF9
TAF13
ZKSCAN8
GTF2B
WNK4
VPS25
GYPC
NMT2
DUSP12
SFXN2
ARL3
EXOSC10
MRPS31
FAM228B
TP53I3
SF3B6
TRUB2
COQ4
ARID3B
TPK1
DNAJC24
DCDC1
OPN1SW
GTPBP10
CCDC124
CCDC136
RPAP2
GLMN
TAF3
MRPL45
RUFY4
CERCAM
ACOX3
TRMT44
VTA1
NMBR