ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

GTPBP6
BRSK2
MAPRE2
MTRNR2L8
ITGB3BP
EFCAB7
BSDC1
KCNJ15
CRLF2
ZNF436
GALNT1
SUPT7L
SLC4A1AP
AADACL4
ATF7IP
KDM3A
WEE1
OBSCN
ZNF408
ARHGAP1
GABPB2
MLLT11
NBPF1
LCA5
SAMD14
RCAN1
RPL27
IFI35
C19orf18
PRKACB
COL4A6
COL4A5
MSH3
DHFR
MTRNR2L2
L2HGDH
DMAC2L
SLC2A8
SF3A3
FGD3
IRF6
LGALS3BP
COX16
TMEM79
SMG5
TESK2
MMACHC
CCDC163
CDIPT
SRPRB
PPP6R1
KRBA1
COPS4
PRSS41
NDUFB3
FAM126B
F2RL3
PIH1D2
NKAPD1
RBBP5
NOX5
FCGR1A
EVPL
HDAC8
PAQR8
NME1-NME2
NME1
AURKAIP1
COX7A2
APOC3
APOA1
MRPL55
PRPSAP1
INTS5
GANAB
MTF2
GJC1
INKA2
DDX20
IKZF3
RPS26
ARID1A
ZWINT
TUT1
MTA2
ZNF134
LY6K
DNAJC16
CASP9
ZBTB26
RABGAP1
ARTN
KDM5C
PLA2G2A
MED18
MAMDC2
EIF2S1
ATP6V1D
TBL1X
DUX4
RPS7
CLPTM1
APOC2
CALCRL
SMG8
SMTN
DEFA1B
DEFA1
SLC33A1
ARHGAP39
TPM3
CCL20
C1orf189
STAT3
AHCYL1
ZNF555
PAXBP1
SELENOH
STC1
WBP1
INO80B
LIMK1
ZNF426
EPHA2
CCNI
SMYD3
RGPD2
RGPD1
SERPIND1
ITFG2
SLFN12
CDK12
MED1
HAX1
ZNF226
RFFL
CELSR1
CYB5R4
TCTEX1D4
PLK3
BTBD19
ABR
DHX16
RAB33A
AIFM1
ZNF514
GDNF
SAMD7
SCTR
DYNC1H1
GLT6D1
BAIAP2
MAP3K14
DUSP6
ZNF571
ZNF540
GPC6
WDR83OS
WDR83
MAN2B1
TEX46
KDM1A
UBB
TNFRSF1B
ZNHIT6
RMND1
ARMT1
SSBP1
EIF3F
RPIA
ZDHHC6
VTI1A
IGFL4
THG1L
GTPBP3
ANO8
MID2
KANK4
ARMCX5-GPRASP2
ARMCX5
ELFN2
CELF1
PSMB7
ABRACL
RAG2
IFTAP
TSKU
RBM33
VARS2
GTF2H4
ZMPSTE24
TMCO2
UTP3
MT1HL1
ISY1-RAB43
ISY1
STK40
CCDC174
CANT1
C1QTNF1
TIMP4
MTBP
MRPL13
LPIN1
PPIL3
NIF3L1
ARHGEF2
NPR1
ILF2
BCL10
NKX1-1
LRIG2
SNX27
RCAN2
COL18A1
RPH3AL
AKIRIN1
NOL12
LY6L
ALG14
VSIG1
AGFG1
DHRS3
ZNF331
PLK2
AP1G1
SLCO1A2
FGFBP3
NID1
KIAA0754
ZSCAN32
ZNF174
ZBTB33
RNF125
GNB1
SLC5A1
REXO4
ADAMTS13
PACSIN2
UQCRC2
C1orf174
KAZN
MICALL1
GBA
COL23A1
YWHAQ
AEBP2
PLEKHG1
PPIP5K2
GIN1
TTC26
ZNF383
ZNF585B
TRIM5
TRIM22
PPRC1
RAD51AP1
C12orf4
EDF1
ZW10
CLDN25
DUSP14
RPA2
ZBED9
IL17F
ZNF56
GPS2
EIF5A
TTC39C
DNAJC25-GNG10
DNAJC25
RRAGB
ZNF790
NRARP
ZNF594
TRUB2
COQ4
MRPS23
EFHD1
CITED4
TFB1M
VTA1
NMBR
TMEM101
DNAJB12
DOK3
DDX41
DLX4
PIKFYVE
ASAP3
RDH12
TMEM247
FAM124B
FAAP20
ZBTB25
ZBTB1
CSNK1E
RHOD
ZNF165
OR1F12
ZC3HAV1
PCYT1A
PM20D2
CORT
CELA2A
NEMF
PISD
TRMO
YPEL3
TBX6
TMEM242
SLC25A53
FAM199X
OPN1MW
OPN1MW3
OPN1MW2
MPP1
THEM4
FRRS1
TTYH2
RPL38
RHOQ
ATP6V1E2
IFNL4
IFNL2
PRRT1B
MITD1
USP21
ARID3B
UFC1
WDR33
RERE
TFPT
PRPF31
HEXB
TAGLN2
HAPLN2
LSG1
TMEM72
ANKRD35
NCOA7
RNF207
RPL22
ARL15
ARMC1
RPL11
CTPS2
TBC1D19
ZBTB38
APOLD1
SIN3B
BNIP1
TIMM10
SMTNL1
TLE4
MED11
ZMYND15
CXCL16
SCARB1
B4GALT3
AK2
KAT6B
KSR1
SGPP1
PSAP
PDE12
IFI6
TNPO3
UBE3B
C2orf66
GTF3C3
NOTCH2
MAST2
ZNF454
GYG2
DDX47
FAM89A
RABGAP1L
LRP6
HEATR1
SPINDOC
PES1
STX1A
TM2D1
C5AR1
TMEM262
PARP15
PSMD3
PARP9
DTX3L
PRRC2B
KANSL3
FER1L5
TOMM40
C3AR1
CASP10
VPS52
RPS18
B3GALT4
NEK2
LIMS4
LIMS3
ECPAS
ZNF577
CD14
ZRANB2
ZNF764
ZNF688
PRSS21
CTSK
ADRA1A
BZW2
SHOC2
BBIP1
BAHCC1
TEFM
BORCS6
SLC35B1
FANCC
RPS24
POLR3A
ZNF251
PTPRH
ACY3
HEMK1
C3orf18
RUVBL1
TNFRSF1A
PCNP
SFRP2
RAB30
RBM25
ENKUR
PEX3
ADAT2
SCMH1
ZNF513
SNX17
EIF2B4
ZNF704
ATP5MC2
ANO9
PTDSS2
ZNF461
TIMP3
ADAT1
SULT1C2
KRT19
UFD1
CDC45
GTPBP4
TTI2
DPP9
TIMM22
RPRD1A
ZNF750
FAM81B
VPS35L
TAAR5
TRAFD1
S100A11
EIF3E
AASDH
AAAS
NOL8
CENPP
GNA13
COIL
GPN2
SLC39A9
ERH
GPATCH3
PAFAH2
PRDM1
SPHK2
OSBPL9
RPL18
FAM83E
SMIM12
NR1H3
ACP2
SNRPB
CEP120
CLASP2
ZNF335
ZNF510
TAF12
NEURL4
ACAP1
GPR35
SLC27A5
TM9SF1
IPO4
EPRS1
ZBTB45
LIG3
TTC14
ARMC7
HEBP2
TBC1D9
FAM184A
TMEM125
MTR
LIMS1
PHC2
ZNF585A
DDX42
CCDC47
PYGB
PHF5A
ACO2
CHMP7
CCNC
SNRPD1
NECTIN4
TMCO3
DCUN1D2
ZNF501
ZNF502
B3GNTL1
LMBR1
RCC2
TTLL2
SESN1
GADD45A
CEP57L1
ZXDC
IL22RA2
DDX18
ANKRD13C
YJU2
NARS2
ZNF221
FBXW7
AKR1A1
AMHR2
MDM4
CCDC97
TRAPPC8
PIGL
NCOR1
ISLR
CDK5RAP1
ABL1
TMEM259
CNN2
HECTD4
GTF2B
SLC25A33
CMSS1
PREPL
CAMKMT
PXT1
KCTD20
CDKN1A
DMAP1
UBAC1
IMP4
CCDC115
TIMM9
KIAA0586
TRPV2
OCIAD2
KIF25
PLEKHM3
FAM222B
SASH1
MROH7
GYPC
ALG10B
DHX8
KDELR1
GRIN2D
PDSS2
FRA10AC1
SAR1B
SOD2
POMGNT1
LURAP1
DYNLRB2
EFCAB14
CLEC4M
JMJD1C
CD209
COMMD2
ID2
CHAD
MAN1C1
CREM
ZNF484
SLITRK5
CLDN7
MTHFD1L
DAPK3
MRPS15
IPO13
DBF4B
NR1I2
ZNF793
GCNT7
FAM209A
MED23
ENPP3
CALD1
WSCD1
CNGA1
ZNF891
ZNF10
FAF1
NIPAL1
PPIH
CDKN2C
USO1
PDE10A
ZNF550
PTPRN2
EXOC2
SMAD5
LRRFIP1
CLN3
APOBR
ST20-MTHFS
TTC32
PPP1R11
POLR1H
ZNF260
SLC22A23
APOL6
ZBTB40
POLG
GMEB2
RBL1
PC
ZNF2
ZSCAN4
SEC16B
NUF2
FDXACB1
C11orf1
ALG9
SRSF1
KIAA0319
TUFT1
MTMR11
IFITM3
ANOS1
ATG4C
DNAJB4
KAT7
FUBP1
SLC1A3
PTP4A1
CCDC59
KDM8
ANKRD17
BNIP5
MYO1B
PJA1
MOB4
CPD
KDM6B
TNFRSF10B
PFDN1
UQCRH
LRRC41
GLIPR1L2
ABLIM1
LSM4
SH2D5
NEK10
SGMS2
TMEM128
CCKAR
GPC1
GALM
ZNF662
KIF2C
MNAT1
DHRS2
BANP
SMARCD1
LYPLA2
GALE
ERICH4
DMAC2
CCNY
SNX12
SF3B5
LONRF3
CDC73
RPL26
KRBA2
TM9SF4
GLRX2
RMI1
HNRNPK
NFYC
BIK
SIT1
CCDC107
ARHGEF39
TMEM167B
ZNF806
C19orf48
INTS4
LIMA1
MRPL1
KRR1
RHOC
PKN2
MED16
VMO1
PSMB6
GLTPD2
ZNF230
PLCD3
ACBD4
CZIB
EIF3D
NYX
RTTN
INTS2
DNM2
LACTBL1
POLD1
C11orf49
SCP2
IRF9
PCBP2
CSTF2T
NR1H2
SH2B1
ZNF302
SLCO4A1
KPNA2
LCT
RFXANK
BORCS8
AMD1
CDK19
STBD1
DRD4
SF3A1
CCDC157
HIRIP3
ADGRF1
RPL37A
CDHR5
SCT
OAZ3
MRPS33
MRPL9
F2RL1
PRRG2
NOSIP
GOSR1
CORO1C
PCDH9
PSMD9
HPD
GPR1
CALCB
CCDC130
TTLL12
EAPP
SNIP1
DNALI1
PDE7B
UIMC1
OSBPL8
ZNHIT3
SUGCT
MPLKIP
UBE2L3
ARL14EP
RIMBP3C
RIMBP3B
MVB12A
ZBTB8OS
RBBP4
NFATC3
TIMM50
NRDE2
SREK1IP1
CWC27
MIDEAS
PHB2
CDC5L
USP54
PEAK1
HMG20A
TNFAIP1
IFT20
INSYN2B
RCN1
TACC1
KIF5C
CDH1
SUGP1
MAU2
ATP5F1B
CYB561D1
ATXN7L2
EMILIN1
OST4
KHK
POC1B-GALNT4
GALNT4
NME7
BLZF1
RRP12
JUN
TIMP2
RTL9
CHST4
YBX3
ASB5
NSA2
GFM2
CDK14
RSPH3
PRDM4
PNPLA5
DMP1
ZNF613
ZNF791
ZNF490
NCF4
ZBTB7B
RDX
LENEP
TSTD1
WDPCP
MDH1
ZMYM6
USF1
TMEM127
CIAO1
MAGEA11
TANC1
KRT31
DND1
WDR55
CORO2A
KRT10
PRKCI
SLC19A1
RANBP3
BST2
ZNFX1
WDR11
NOP16
HIGD2A
SIPA1L2
MAP7D2
CRADD
NFAM1
BRF2
ZNF350
MRPS18C
HELQ
PRKG1
AAR2
CYB5R2
SCYL3
PSMG4
UBQLN1
HSD17B1
COASY
MLX
WTAP
KIF3B
HSDL1
DNAAF1
AJUBA
INO80C
TMED1
TYSND1
SPRR2F
KCNH4
RGPD6
S100A13
ADAMTS17
HCRT
S100A1
CHTOP
DNAL4
SUMO3
WDR36
FHL3
ZNF48
UTP11
WASF2
TBC1D10B
MYLPF
SEPTIN1
ZSCAN30
NRL
DCAF11
DCT
CES3
SLC39A6
MYO1H
RUFY3
SLC35A4
APBB3
SRA1
CD2BP2
HAUS4
SLC25A44
PFKP
TRAF4
TEF
BORCS7
RMND5A
ZNF518A
ZNF570
ZNF569
TMEM30A
NEDD4L
FBXO46
STAC2
AGTPBP1
CEP162
C2CD4D
LGI1
GDF6
THEM5
ZNF572
IARS2
BPNT1
STARD10
CAND1
QRICH1
SIRT4
PTAFR
TCIM
PAFAH1B1
LMNA
PTPRK
TEKT3
C8orf37
LSM5
AVL9
ATP5MC3
RIPPLY2
GPX1
LRRC37B
UBQLN4
LAMTOR2
LMNTD1
SGIP1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
CTR9
LGALS8
TCEANC
RAB42
ERVFRD-1
CNPY2
CPN2
SLC7A11
RCC1
MBNL2
NHLH1
TBX18
SEPHS2
EIF4A3
BCAR3
TRMT1
NACC1
LTA4H
NEK4
ITIH1
MAP2K3
SPOCK2
RPAIN
NUP88
ASXL3
LGI2
CCNT1
TEKT2
ADPRS
TMBIM1
STAT6
KLF3
ACTR6
PROC
C12orf40
ABCD2
GLCE
TTC9B
CCNP
STRA6
MTRNR2L10
TBC1D22A
PSMD8
TMBIM6