ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
ZNF436
MAPRE2
GTPBP6
ITGB3BP
EFCAB7
AADACL4
MTRNR2L8
KCNJ15
BSDC1
PAQR8
CRLF2
COL4A6
COL4A5
SUPT7L
SLC4A1AP
PRKACB
C19orf18
FGD3
F2RL3
IRF6
MSH3
DHFR
MTRNR2L2
ZNF408
ARHGAP1
GABPB2
IKZF3
GALNT1
NBPF1
SCTR
OBSCN
KDM3A
ATF7IP
RBM33
YPEL3
TBX6
KRBA1
CYB5R4
MRPL55
PAXBP1
SLC2A8
LGALS3BP
TMEM79
SMG5
CDIPT
ZNF426
ABR
RPS26
SRPRB
THG1L
LCA5
CANT1
DHRS2
C1QTNF1
ZNF571
ZNF540
NOX5
CALCRL
UBB
PRPSAP1
WEE1
ARID1A
CCL20
SMYD3
RPH3AL
TCTEX1D4
PLK3
BTBD19
DEFA1B
DEFA1
MT1HL1
RPL27
IFI35
ZNF134
SAMD14
HDAC8
CELSR1
TFPT
PRPF31
L2HGDH
DMAC2L
AHCYL1
RRAGB
PIH1D2
NKAPD1
KAZN
CELF1
DYNC1H1
CCNI
ST20-MTHFS
SMTN
ZNF594
NDUFB3
FAM126B
PLA2G2A
CLPTM1
APOC2
RDH12
KSR1
CELA2A
LRIG2
GTPBP3
ANO8
GDNF
AURKAIP1
MAP3K14
VSIG1
ZSCAN32
ZNF174
SSBP1
RGPD2
RGPD1
RHOQ
ATP6V1E2
RPIA
PPIL3
NIF3L1
ZNF514
FCGR1A
PPP6R1
RCAN1
SERPIND1
RBBP5
ANKRD35
INTS5
GANAB
ZDHHC6
VTI1A
ARTN
GTPBP4
EVPL
RPS24
POLR3A
ZNF577
ZNF891
ZNF10
NOL12
EPHA2
GNB1
TLE4
ABRACL
SLC39A6
SAMD7
VARS2
GTF2H4
LY6K
NEK2
ISY1-RAB43
ISY1
CDK12
MED1
KDM5C
RAG2
IFTAP
ARHGAP39
MAST2
EIF2S1
ATP6V1D
PRSS21
SLC5A1
ZNF555
APOC3
APOA1
RAD51AP1
C12orf4
DUSP6
ZNF302
GJC1
ZNF383
CREM
ZNF585B
PDE12
PM20D2
IL17F
NARS2
TNFRSF1B
SIRT3
PSMD13
MRPS33
TBL1X
UBE3B
SLFN12
ZWINT
ZBTB26
RABGAP1
FGFBP3
ARHGEF2
CD2BP2
PRSS41
GBA
MAGEA11
IL22RA2
TESK2
MMACHC
CCDC163
BCL10
NKX1-1
FAAP20
DNAJC16
CASP9
ELFN2
SLC33A1
PISD
AKIRIN1
COX7A2
WDR83OS
WDR83
MAN2B1
ZNHIT6
WDR33
BAIAP2
HAX1
TSKU
KAT6B
SNIP1
DNALI1
UBAC1
AP1G1
STX1A
SOD2
TPM3
C1orf189
ITFG2
AGFG1
IGFL4
MID2
GCNT7
FAM209A
GPR35
B4GALT3
TTC26
KANK4
ACY3
SF3A3
PTP4A1
MTF2
ERICH4
DMAC2
DUX4
INKA2
DDX20
ZW10
CLDN25
AAAS
LACTBL1
TMEM125
GPC6
THEM4
ZMPSTE24
TMCO2
NPR1
ILF2
TRIM5
TRIM22
COIL
ZNF750
NME1-NME2
NME1
LRP6
PPRC1
DYNLRB2
ARMCX5-GPRASP2
ARMCX5
TMEM242
PROC
EPRS1
C3AR1
ARID3B
KCNH4
CITED4
HCRT
DMP1
NCOA7
STC1
EIF3F
SCMH1
LIMK1
AEBP2
IFI6
SELENOH
YWHAQ
ID2
NEMF
COX16
PACSIN2
COPS4
DND1
WDR55
TNPO3
PCDH9
HSDL1
DNAAF1
MICALL1
MTR
STK40
ZNF572
CD14
AKR1A1
ZNF3
SNRPD1
RFFL
NID1
DDX42
CCDC47
LMNA
PARP15
TYSND1
PARP9
DTX3L
HEMK1
C3orf18
YTHDF2
CASP10
GLIPR1L2
CYB561D1
ATXN7L2
RAB33A
MRPL54
APBA3
AIFM1
RHOC
JMJD1C
CHMP7
VPS35L
CEP120
SMAD5
USO1
KRT10
COL18A1
PHC2
TPK1
EDDM3A
PLEKHG1
MXI1
C1orf174
PRRT1B
RERE
ZBED9
MRPL1
ZNF790
CNGA1
RABGAP1L
RPL11
NIPAL1
TMEM72
INTS2
COQ8A
RNF125
TTC39C
LSG1
RMND1
ARMT1
ZNF226
HEATR1
RNF207
RPL22
FNTB
DNAJB12
ABLIM1
MED11
ZMYND15
CXCL16
PLAAT2
TMEM127
CIAO1
TTLL2
SGPP1
RPA2
ZNF793
KRT19
OPN4
TIMM10
SMTNL1
GLT6D1
REXO4
ADAMTS13
SLC25A53
FAM199X
KDM6B
PHF5A
ACO2
ZNF335
NR1I2
TIMP3
ZNF56
CGGBP1
LIG3
C3orf38
CDH1
CCNC
MTBP
MRPL13
MROH7
TBC1D19
LIMS1
EIF1AD
CST6
BANF1
MIDEAS
SLCO1A2
AGTPBP1
ELL
PLEKHH2
STAT3
TRUB2
COQ4
CCIN
TUFT1
SHOC2
BBIP1
RGPD6
C5AR1
ITPR3
SH2D5
OR13H1
AK2
BEST4
TRAFD1
CCKAR
BIK
CCDC130
UBE2L3
RIMBP3C
RIMBP3B
HEXB
PEAK1
HMG20A
RSPH3
PLAU
CORT
GAPDH
RCN1
PLK2
USP21
ZBTB33
UFC1
PSMB11
GPX1
UQCRC2
ZSCAN4
PSMB5
SFRP2
ZNFX1
CLASP2
TMEM107
ARHGEF3
SNX27
ARL15
LIMS4
LIMS3
SPATA12
EDF1
RMI1
HNRNPK
TXNRD1
NYX
CEP162
NHLH1
CPN2
TUT1
MTA2
TRMT11
GPS2
EIF5A
CALCB
ZBTB40
PTPRH
CTR9
RBM25
DHRS3
ZNF331
MIS18BP1
RCC2
ASAP3
KRT31
NOL8
CENPP
DYNC2I2
SMG9
GLRA1
CDC73
STN1
RPL12
LRSAM1
SLC35A4
APBB3
SRA1
DRD4
TMEM247
IFNL4
GLRX2
CRTAM
IFNL2
APOL6
CDHR5
SCT
RBMS2
MKLN1
GTF3C5
MAP7D2
FEM1C
LY6L
CLCN3
ZFP37
ENSA
MTMR11
CD24
FRRS1
NRL
DCAF11
CHAD
ENPP1
ZBTB38
RCAN2
AMHR2
DUSP14
CCDC97
TRMO
PSMB7
DDX47
SIN3B
SPOCK2
BNIP5
ANKRD1
BORCS7
CYP46A1
SLC25A33
TIMP4
RFXANK
BORCS8
USP9X
PCNP
MTHFD1L
FAM184A
CSTF2T
ZNF461
HAPLN2
THAP12
GVQW3
NME7
BLZF1
C19orf25
CLN3
APOBR
RHOD
ZNF623
ZNF829
ZNF568
ZNF221
TIMM9
KIAA0586
TAGLN2
PRKCSH
CCDC151
HKDC1
LONRF3
TBC1D22A
ZNF566
AASDH
TNFRSF1A
CASP3
ZNF704
FAM81B
VGLL1
ELSPBP1
BSPH1
ZSCAN30
LMTK2
TAF12
PRKG1
PSAP
GYG2
PXT1
KCTD20
TCIM
WSCD1
SHISA3
ISX
LDHD
ZNF24
TEX46
KDM1A
ZSCAN22
SLITRK5
SCYL3
FAM89A
KCTD9
CDCA2
GORASP2
ZKSCAN2
POMGNT1
EFHD1
TRMT1
NACC1
LURAP1
ZNHIT3
NAV2
OPN1MW
OPN1MW3
OPN1MW2
FKBP5
ZNF416
APOLD1
HEBP2
JUN
CCDC142
TTC31
LSM4
NTN1
PGLS
RIN2
OCIAD2
ZSCAN23
ZNF527
MNAT1
KCNMA1
ATL1
ZC3HAV1
CEBPA
XPNPEP3
ST13
DNAJB7
EIF4A3
BNIP1
SMG8
SOX30
SESN1
CEP57L1
UIMC1
TRAPPC8
TM2D1
ASIC3
DNAL4
TEX28
SUGP1
MAU2
SAP130
ZNF501
ZNF502
BZW2
STAT6
CCNG2
SLC7A11
SCARB1
MPP1
SYT16
GAL3ST2
KLHL34
FRA10AC1
BFSP1
RPS3A
IRF9
MVB12A
CNIH3
KCNAB2
DLX4
ADAT1
ZNF721
PIGG
BST2
ZFP30
WDR11
CCNY
INPP5A
UBQLN1
TBCB
POLR2I
OVOL3
SLC19A1
ADRA1A
EXPH5
PLS1
SLC39A9
ERH
CLASP1
TFB1M
EFCAB14
MYO1B
SLC41A3
PPIP5K2
GIN1
RBL1
ZRANB2
RFC4
FRAT1
ZNF251
FRAT2
PRAC2
PRAC1
CD109
HOXB13
SUMO3
NRARP
UTP3
ZNF300
PRPF18
LUC7L
FAM234A
ZNF75D
GPN2
CTSB
GNA12
TOMM40
GPATCH3
TIAM2
C6orf118
CD320
TBC1D1
ZNRF3
SAR1B
RIPPLY3
NFATC3
CTPS2
FBXO46
RPAIN
NUP88
FCRLA
PTPRN2
MSRA
NUB1
LMBR1
SIPA1L2
CPD
ZNF22
CHPF2
ABCF2
KLHDC7B
PTPRK
PEF1
TYMP
ODF3B
HTR3B
PNMA3
TDP2
ACOT13
MRPS18C
HELQ
SGMS2
NRSN2
NUDT5
CDC123
SULT1C2
GPR1
LGI2
CCL7
CCL11
CLEC4M
CD209
NUDT9
NOP16
HIGD2A
EIF3E
NAA20
NFYC
PLPP5
SSUH2
ZNF792
PSMD3
AGPAT3
CMSS1
IAPP
ARMC1
RAI1
ENKUR
RNF223
NDUFS7
RMND5A
MED18
SPSB1
TRIM25
EIF2AK3
CSNK1E
RTL9
ISLR
SFXN3
PDZD7
ZNF662
SMIM12
BANP
FANCC
ARHGEF18
STBD1
PEMT
ADAMTS17
RPRD1A
PC
FERMT3
CACTIN
RGL2
PFDN6
TRPV2
RIIAD1
CELF3
MMP28
CARHSP1
AQP12B
AQP12A
TTLL12
ALG14
LZTR1
SNRPD3
GUCD1
SIRT4
C19orf48
PREPL
CAMKMT
ZXDC
SLC1A3
ROCK1
BAMBI
KLF6
SASH1
TTLL1
GRAMD4
TTC32
PES1
VPS13B
ZNF518A
NOTCH2
CYB561
LRRFIP1
PDF
NIP7
COG8
HBS1L
ZFP36L1
SH3BP4
TEFM
CCDC69
RPS27A
CLHC1
CDKN1A
TNFRSF10B
RASL10B
OPRL1
RGS19
LKAAEAR1
MRPS23
SUGCT
MPLKIP
PCYT1A
PLAAT1
SPEF2
RSRP1
SLCO4A1
NHSL1
MSANTD4
MYOM2
C2CD4D
THEM5
RPS7
TXN2
TLE7
MRPL48
NOTCH2NLB
EHD2
TIGD1
EIF4E2
RPL26
KRBA2
UFD1
CDC45
PSMG4
C2orf66
GTF3C3
E2F2
OSBPL8
CASP7
PRDM1
RUFY4
ORC2
POLD4
PHACTR4
PMEPA1
SPR
HACD2
ZNF230
IRAG1
SLC23A3
KAT7
CLDN7
RETREG2
CNPPD1
LGI1
CLIP2
ATP5F1B
UBE2F
WBP1
INO80B
WTAP
TMBIM1
TTC14
SNX3
FOXP4
DPM2
ZNF2
FBXO7
C12orf40
ABCD2
NRDE2
FURIN
SGSM3
PNPLA5
PIP5KL1
PDE11A
RBM45
CLTC
PDZRN3
PIK3CB
IFT46
ARCN1
TLCD3B
DOC2A
C16orf92
NEDD4L
NEURL4
ACAP1
GNA13
TEF
AFF3
ECPAS
ZNF433
ZSCAN31
ELAC1
ZNF165
ABLIM2
ZNF878
TMBIM6
OR1F12
PUS10
PEX13
CES3
APOL2
SERPINA3
NECAP1
ALDOA
SORBS1
ZNF14
KIAA0319
PSG9
TTC9B
CCNP
APOL1
PDXP
EAPP
CCDC59
TMOD1
CEP85L
TMEM259
CNN2
SIT1
CCDC107
ARHGEF39
SF3A1
CCDC157
LIMCH1
PAFAH1B1
HSCB
CHEK2
STX12
ADAMTS16
VPS13D
CALD1
CNIH4
PRKAG2
EXOC2
PNISR
IRF2BP2
SETD4
CBR1
PJA1
SLC27A5
YJU2
RPS14
ZBTB45
KRTAP10-9
VPS52
RPS18
B3GALT4
KDELR1
GRIN2D
TCEANC
CZIB
TRAF4
AKR1D1
PLA2R1
CFAP43
UTRN
ZNF823
ZNF708
DNAJC25-GNG10
DNAJC25
INO80C
PLEKHM3
CCDC174
GABPA
ATP5PF
ZNF454
TUBB