ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

ZNF550
MSH3
DHFR
MTRNR2L2
KCNJ15
ZSCAN32
ZNF174
SMYD3
MTRNR2L8
MTRNR2L1
BTBD8
KRBA1
ZSCAN31
CLDN18
DUX4
PAXBP1
RAB37
OBSCN
RGPD2
RGPD1
KIF5C
TMEM43
CHCHD4
SMCO1
FKBP9
ZNF514
OR4K17
ARHGAP45
PTPRN2
ZWINT
SLC28A2
LOC102724770
DGCR6
FAM178B
H4C8
LCE3B
LCE3A
NOX5
ZNF613
TSC22D3
NCBP2L
TTLL1
GBA
MID2
ZNF222
RAPH1
MMEL1
JDP2
ZNF134
DIP2B
DIO2
CRLF2
UQCRC1
TMEM89
BSDC1
HTR5A
SNAP47
JMJD4
HLA-DRB1
ABCC9
UBE3C
NPR1
ILF2
TINAGL1
APOC3
APOA1
NDUFS7
ZMYM3
LIMK2
ZNF317
ZNF91
UBC
DCP1A
C19orf18
RBBP5
LOC102724265
CHIT1
NXPE4
ST20-MTHFS
FBXO31
ARID3A
ZNF761
OTUD7A
RAX2
MATK
COX16
TDP2
ACOT13
HECW2
DACH1
POU2F1
FMO4
TRIM9
LMTK2
FUT8
ZBTB8B
DEFA6
B4GALT7
TMED9
ALLC
CASC3
RGS18
EPS8
MKLN1
FAM184A
SAMD7
TMEM259
CNN2
TOP3B
OR2B2
H2BC17
H2AC17
NGB
SMG6
C5orf46
LY6L
MYH2
FAM167A
BRSK2
PDP1
CRP
DNAH6
TEX38
ATPAF1
ATP5F1B
EIF2D
ZNF76
TBC1D19
ACP6
RD3L
ATP5MC2
ATAD2
TLE7
RAB5IF
IRAG2
STK39
CARD14
GPR35
FAM227B
DTWD1
NPAS4
FRG2
SLC44A1
USP30
DRAP1
C11orf68
SUB1
GPR19
GLT6D1
AURKAIP1
RAD54L2
CYP4X1
POLG
BLK
RHOT1
TNFRSF13B
PRIM1
HSD17B6
TPM1
GCNT7
FAM209A
WDR11
DEGS2
ZNF34
ZNF555
CCDC130
DDX1
COMTD1
OR4X2
RERE
ZSCAN18
UBE4A
KRTAP9-9
KRTAP9-6
COL23A1
COMMD2
TACO1
RPS14
TLR9
NCLN
S1PR4
LGI1
ZNFX1
DMAP1
JAK1
ITGB3BP
EFCAB7
SLC33A1
NCOA7
CXCR2
ZNF394
ZCCHC4
CCDC88B
BARHL1
HTN1
NUF2
CHST3
WWOX
RAB11FIP1
WDR33
MRPL38
TRIM65
S100P
KATNBL1
ZNF662
WDFY1
OR2F1
NARS2
TOR1A
CORIN
EIF4A3
CPT2
PIP
SAMD4B
GMFG
NCBP3
KNL1
POLN
HAUS3
ANAPC1
DPH6
METTL15
KIF18A
CCL24
HMGB1
USPL1
PDE7B
ZNF670
PRSS38
RGPD6
RGPD8
RGPD5
ERCC4
NEMF
IQSEC3
FSIP2
CITED4
MZT2A
PRDX6
LEP
ATP1A1
TNKS2
MTNR1B
TATDN3
NSL1
RHEX
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
TBC1D3J
ANKRD20A1
FRG2C
PDRG1
RRP15
ALG6
CNGA3
AGR3
CLEC4M
BFSP2
NDUFS2
ADAMTS4
FETUB
DBNDD2
PADI4
RPS29
SNX19
BCR
GPD1L
PPP6R1
TSPAN10
NPLOC4
OR6B1
PER3
SYT3
SLC36A2
NOD2
TAFA2
IGFALS
ZFP30
ACYP2
EPB41L2
UGT1A10
USHBP1
BABAM1
CCDC150
FAM98B
FAM25E
NEUROD4
MYO19
PIGW
GGNBP2
MRPL28
C2orf88
DSTYK
CIZ1
DNM1
TRPC3
CDHR1
SNTG2
ZNF708
C2orf66
NOTCH2NLB
LRP11
FGD3
STX18
TM9SF1
IPO4
TTYH1
MTF2
CALM1
CDYL
TOR1AIP2
TOR1AIP1
MRPL21
IGHMBP2
IKZF3
ZPBP2
FAF1
CDKN2C
MAP3K7CL
ZNF124
SPINK8
COQ9
CIAPIN1
RTTN
ARSD
DUS1L
PRSS22
SCRT2
LOC388282
SLC24A1
INTS14
CRH
FOXN1
CREG1
PRR25
GNG13
CHTF18
RPUSD1
TMEM229B
STRBP
TRIP4
PCLAF
IQGAP2
TJAP1
RAG2
IFTAP
FAM174B
CLEC19A
ZNF433
ZNF501
ZNF502
AP3S2
IRAK2
SMIM12
SMIM17
NAP1L4
RTP5
COPS4
COG2
SPTBN4
ZFP37
BLVRB
CCDC187
DENND11
CALCB
CLTB
DRG2
CDC73
RPS6KB2
PTPRCAP
CEP112
PHF2
SF3A3
TTLL12
RNF217
GNAL
PCYT1A
PLK1
IAPP
GABARAPL1
SCARF1
RILP
WNT9A
PAX4
RPS7
TEFM
CCDC92B
SCIMP
ADAMTS17
NEMP1
NDST2
NAB2
MAMDC2
ZNF491
ZNF440
TRAM1
GRM4
PDE8A
ALG10B
NUP107
CNTNAP4
ACOX3
MKRN2OS
MKRN2
XYLB
CFHR4
ZER1
RAPGEF1
CASTOR1
CXCL8
MYLK
LAG3
KRTDAP
SLC38A10
ABRA
FRA10AC1
SPANXC
OR2AP1
GPAM
KCNH7
ISM1
LHX6
CNGA1
UBE2F
TLE2
SLC44A3
TLE5
NUDT15
EPRS1
MRPS31
FAM207A
POLE4
ARHGAP32
PSMD9
HPD
PCDH1
SELENOH
GPX3
LDHD
B4GALNT4
CYP17A1
UTP3
ELAVL3
FGD4
CSRP1
NBPF11
THBS1
GBP7
ZMAT2
HARS2
HARS1
CDK2AP1
KLHL12
ADTRP
WASHC3
TMED1
CCNB1IP1
PARP2
CBR3
MIER2
CACNG4
RHOT2
RHBDL1
RAF1
NCOA3
PCARE
DUSP15
OR10A3
SHTN1
ADAM2
NSFL1C
MPZL1
SPACA3
ZBED9
PARP15
GSTM5
SLC25A51
DPP9
SCTR
IMP4
CCDC115
USP2
ZBTB26
RABGAP1
ZNF792
UIMC1
CERS3
RPL22L1
MFAP4
PAX5
CAPN2
ATAD2B
ZNF527
SIT1
CCDC107
ARHGEF39
ZZEF1
CYB5D2
CEBPA
BCAT2
ABLIM1
HIBADH
AARS2
COL6A1
TRIM52
RGS21
TGM1
RABGGTA
TFAP4
SNX18
PNPLA6
PRKAR2A
NUAK2
THG1L
SYK
HECTD2
CLUAP1
C16orf90
TMC7
KRTAP10-12
GINS1
LAMB2
LIMCH1
SLF1
KIAA0825
ADRM1
STX6
TYW3
CRYZ
CFAP73
NINJ1
THEM4
ZNHIT6
CYB5R4
ZNF436
AADACL4
F2RL3
YPEL3
TBX6
TSKU
FAM153B
ZNF24
BPIFB3
THUMPD1
PDE11A
SNCG
MMRN2
GTPBP4
EIF4EBP1
GTPBP6
TBC1D22A
ZSCAN30
MANEA
ANP32D
COX6A1
ZNF143
TATDN2
LMLN
IQCG
CDCA7
LMLN2
ADAM21
IER3IP1
ZNF117
TEAD2
DKKL1
CYP2C9
SHISAL2B
PTGER2
FAM234B
TLR2
GORASP2
SLC30A7
EXTL2
SULT1C3
TACC1
EDF1
FEM1C
BCAR3
TTC7B
ACY3
FAM193B
MBOAT4
DCTN6
C10orf143
ZNF3
ADCY10
APOBEC3B
IL22RA2
ZNF572
NKX1-1
ZNF324B
ZNF132
SUMO3
BAAT
CNOT3
VPS13D
MRPS16
PEX7
TSPAN5
AKR7A3
NT5C3A
COMT
METTL8
INKA2
DDX20
HACD2
TXNRD2
MINDY3
KAT6B
PPIG
IFNAR2
MAP3K4
DCAF17
SARS2
MRPS12
SLC27A5
TMEM242
ST3GAL5
DMXL2
RBPJ
COL18A1
ZNF562
YJU2
SELENBP1
PXDNL
SPATA33
SCCPDH
SLC1A7
ZNF426
CTAG1B
CTAG1A
PNMA3
PPP2R3A
ELAC1
FDX1
ZNF83
YWHAQ
SNX20
C2orf69
SNX11
CBX1
SAP130
RABGAP1L
NARF
DNAJC25-GNG10
DNAJC25
ARHGAP39
CLIC3
ZKSCAN7
TTC30B
PSMD8
APOL4
NRARP
CAT
MROH7
MAPRE2
ZBTB44
YY1AP1
DAP3
ACAA2
TMCC3
CHD1L
METTL7A
POLD1
GPRC5C
GALNT1
PAIP2B
RSU1
DUSP6
MON2
ART1
LBP
MRPL55
SRPRB
DIP2A
FRMPD4
C1GALT1C1L
TMPRSS12
TEDC1
CYBC1
CRIP1
ZNF623
UBE2D3
TMEM62
SSBP1
IFI6
ZNF627
ACER2
LCN8
RPL39L
SMIM31
FASTKD1
ZNF165
SUPT6H
SDF2
CRIP2
CISD2
SDR42E1
LCN15
ACBD6
ABLIM2
FGL2
RPL10L
RFC1
EXOC6
PLA2G4E
TIMELESS
SAMD14
GRAMD4
RBM33
JMJD1C
PDCD7
MAD1L1
CLPP
FRRS1
TESK2
MMACHC
CCDC163
ZNF443
LGALS12
PRKACB
MAP3K2
C4B_2
C4B
PNPLA7
MRPL41
ZNF878
MACC1
C16orf54
ZNF341
CD209
B3GALT2
TMCC1
PRRT1B
CREBL2
HAUS5
FAAH
PLAAT5
ZNF487
RNASET2
SLC2A7
NCKAP1L
SATB1
PEX3
ADAT2
RPL27
RPL11
IFI35
MRLN
UCKL1
REM1
DEFB124
MYOG
TMX2
MED19
SEM1
CEP85
NFE2L3
MED23
ENPP3
LRIG2
CANT1
ZNF594
OAZ3
RBBP9
ZNF577
LILRA5
C1orf159
C3orf14
B4GALNT3
SPATA13
WDR3
GDAP2
TAS2R39
BTN3A3
TTC32
BAX
LOC110384692
C4A
FN3K
MRPS33
NBPF1
GJC3
MSRA
BORCS7
LUC7L2
TMEM14C
COLEC11
MOB3A
IZUMO4
TM9SF2
KIF2C
FMC1-LUC7L2
FMC1
MRPL9
SMAD1
PIAS2
SUPT7L
SLC4A1AP
SPANXB1
CD2
THOC5
ACTL8
GAS2L3
VBP1
RPGRIP1L
FTO
EFCAB10
ZNF614
TRMT44
CALD1
PARK7
LSS
ETFBKMT
LRP5L
ZNF566
TMEM125
SLC38A9
LCN6
PIN4
ZMPSTE24
GLRA1
ZNF891
ZNF10
SPATA22
MDM4
INTS12
GSTCD
EAPP
NME1-NME2
NME1
SLC41A3
TBC1D13
TMEM106C
TEX50
SCAF11
GALK2
TMEM262
KDM3A
FKBP11
ZNF32
FEM1B
LHFPL4
MAPK10
PGLYRP4
TMEM161A
PHRF1
NOS3
TMEM44
PCYOX1
ITPR2
ASPA
SEMA3D
LIMS2
C5orf60
MTERF1
CEACAM21
ZNF391
LARP1
NRL
DCAF11
TMCO2
RPL37
CARD6
SAR1B
POLR3B
GTDC1
CALCRL
BRF2
NEU1
LSG1
NTSR2
LRP5
CADM2
SLC17A5
REXO4
ADAMTS13
REEP3
PLK2
MNAT1
RTP3
LTF
GTF2H2C_2
DUSP16
UBE2H
ZNF589
FABP6
ZNF611
CYC1
ERN2
PROKR2
ATP9B
DHRS2
S100A2
HLA-E
RRAGB
DLAT
MLLT1
LOC100289561
KCNMA1
TMEM41A
CASP10
STC1
VN1R4
GTF3C3
CD14
FKBP5
ANGEL2
CTSF
IL21R
B3GNTL1
WDR36
MIPOL1
RMDN2
GCNT1
VPS37C
DNAJB12
ADI1
CYP46A1
ZNF829
ZNF568
CCDC59
C10orf99
RTCA
SERHL2
LPIN1
SRSF7
PRDX3
ACSM2B
PPIP5K2
GIN1
VARS2
GTF2H4
NDUFV1
TRMT5
SLC38A6
TTC26
GTF2H2
STX16
ST6GALNAC6
CNIH4
CHMP7
POLR2J3
PAFAH2
INPP4A
TEX46
KDM1A
TMBIM4
ERV3-1-ZNF117
ERV3-1
CASP4
SKP2
LMBRD2
RNF126
TFPT
PRPF31
PIK3R1
MAGEB1
MACROD1
MOB4
ATL1
CNOT6
GTF2A1L
RPIA
POLDIP3
ZNF300
TFPI
DNAJC3
ATP6V0A1
GPAA1
EXOSC4
INTS5
GANAB
GTF2H2C
VTA1
NMBR
TMEM68
TGS1
PDCD6IP
ZNF772
GABPB2
SPATA6
ZC3HAV1
PSEN1
INO80C
MTR
L2HGDH
DMAC2L
C9orf64
TXN2
DEK
NCEH1
AIG1
POLR2J2
RUVBL1
ALDH3A2
CLEC12A