ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1945293 | hESC WIBR3
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◣ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
FRG2C
KCNJ15
DUX4
SNCG
MMRN2
LDHD
THEM4
CNOT3
ZWINT
GLT6D1
EIF4A3
SMYD3
ST20-MTHFS
TATDN2
CHIT1
NKX1-1
MANEA
ZBTB8B
EIF4EBP1
AADACL4
SPANXB1
CYP2C9
FAM234B
ATP5F1B
IRAK2
MAMDC2
BPIFB3
ZNHIT6
FRG2
SHISAL2B
LMLN2
ZNF143
PDP1
SULT1C3
FAAH
UQCRC1
TMEM89
YPEL3
TBX6
MID2
MYH2
ZNF708
ADAM21
DMXL2
LGALS12
PLAAT5
PTGER2
COQ9
CIAPIN1
RHOT1
BCAR3
TTC7B
RGS18
CNGA1
TMEM14C
CRP
LEP
GCNT7
FAM209A
TACC1
ACP6
WDR33
SARS2
MRPS12
CFHR4
B4GALNT4
ABLIM2
PDE11A
COX6A1
OR4K17
RGS21
PPP2R3A
ZBTB44
RBPJ
CALD1
CDCA7
ACSM2B
ACAA2
COL23A1
CALCB
THUMPD1
AKAP10
DBNDD2
F2RL3
PAIP2B
ACYP2
ZNF24
C2orf66
BTN3A3
ZNF562
BAAT
MAGEB1
SPATA33
PIP
TMEM229B
GRAMD4
LMLN
IQCG
FAM184A
BAG3
TTLL1
C10orf53
TEAD2
DKKL1
PXDNL
SUPT6H
SDF2
MINDY3
GSTM5
LSS
SPANXC
GPR82
PADI4
RPL10L
ZNFX1
MON2
FEM1C
SLC27A5
CYP46A1
FDX1
PHRF1
DIP2A
ANP32D
CASP4
RTP5
TMCC3
SAP130
FAM227B
DTWD1
ZNF611
LOC102724770
DGCR6
COMT
TXNRD2
CYP17A1
TEDC1
CRIP1
CRIP2
FGD3
TMEM242
TCEAL4
CD200R1L
C10orf143
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UGT1A4
UGT1A3
MRPS16
OR5K3
CDK2AP1
ZNF433
CERS5
SLC30A7
EXTL2
FAM193B
LIPG
CADM2
ZSCAN30
CTSF
CEP85
EFCAB10
APOL4
FRRS1
CPM
UBE2F
TSKU
PIAS2
SMCO1
IFT88
ESR2
ATP9B
EML5
BRSK2
IL22RA2
DNM1L
C2orf88
SCCPDH
DPH2
ATP6V0B
ZNF550
DIO2
CASP10
SMIM31
NARF
FRMPD4
CYBC1
ZNF527
ZNF589
CAMP
NOX5
EDF1
TAS2R39
PUS1
C2orf69
DNAJC3
SLC28A2
ADH1B
HACD2
TSPAN5
ZKSCAN7
GAS2L3
ACSM2A
TLR2
FAM47A
CLPP
SATB1
VN1R1
ZNF487
ANGEL2
OR10X1
TNFRSF6B
NLRP2B
PSMD8
PEX7
FABP6
ARHGAP45
ALKAL1
WDR3
GDAP2
CD2
ADI1
RNF212B
TBC1D22A
MOB3A
IZUMO4
NOS3
DGKQ
ELAC1
TMCC1
KCNMA1
MBOAT4
DCTN6
POLD1
TIMELESS
NCKAP1L
ZNF117
ZNF841
LILRA5
GCNT1
VBP1
RTCA
MROH2B
ACER2
NRL
DCAF11
GTF2A1L
CPT2
IFIT1
OR2L5
CLIC3
TXNL4B
DHX38
SLC22A25
ZNF792
TMX2
MED19
RUVBL1
RBMXL2
ORAI1
GTPBP4
HAUS5
LRIG2
CYP4X1
SPRR2F
IER3IP1
MAPK10
ZNF83
PLAAT1
ART1
RFC1
BTBD8
OR10J1
HP
ERN2
MUC3A
NUDT9
C1GALT1C1L
PRDX6
RSU1
EHD2
PNPLA7
MRPL41
IFNA5
MKLN1
TMEM62
CLEC4M
CD209
GTF3C5
GIMAP4
ZNF665
BCR
ZNF627
TMEM106C
CDC34
CATIP
ZNF557
RAD54L
MBD3L3
PPIG
FASTKD1
ZNF341
COLEC11
FAM120B
MRLN
TEX50
DUSP16
GPD1L
POLR2J2
ZNF280D
ZNF561
ACOX3
TRMT44
PTGES2
FBLN2
PABPC4L
OR2AP1
GPR35
UBN2
RXYLT1
ITGB3BP
EFCAB7
PRSS38
ETFBKMT
SERHL2
CLCN5
CCL24
NXPE4
TTC30B
C9orf64
ZNF91
ACY3
TMEM70
LY96
CYB5R4
IGFALS
C5orf60
ZNF582
ZNF583
PAAF1
USP17L21
USP17L20
USP17L12
USP17L22
ZDHHC9
FOLR3
FBXO31
ZNF486
VKORC1
BCKDK
PER3
SEM1
PLEKHA5
TXN2
CRYGB
CRYGC
BTNL9
AKR7A3
PRR4
C3orf14
NETO2
SEMA3D
GLO1
TCF4
ST3GAL5
SNAP47
IFNAR2
ZNF324B
ZNF132
PPM1K
SLC52A3
CNOT6
ATP6V0A1
NXPE2
PDCD7
ORC4
MBD5
PCYOX1
CEACAM21
C10orf99
NT5C3A
STAM2
FGFBP2
SDR42E1
ZNF134
SLC38A7
ACOT2
ANXA3
HEATR4
RPL30
THAP11
NUTF2
CENPT
SPATA13
ZER1
TBC1D13
MLYCD
EDNRA
CPA1
EIF1
GORASP2
FGL2
PHB
SEL1L
RDH12
SRD5A3
METTL8
DCAF17
SYN3
PLG
NSUN7
COX8C
UNC79
BTBD7
CTSV
MPHOSPH8
SLC16A2
HSD17B4
LRRC36
KCTD19
NANOGP8
ADCY10
ZNF761
TAAR9
TMEM202
MRPS36
MAP3K4
UGT1A10
ZDHHC14
MTUS2
CAPN8
MYOG
FNIP2
PIGZ
GLS2
RNF126
FSTL3
KRT82
PIK3R1
TFPI
STXBP5L
MIF
LAMB2
SET
PDGFRL
RPL11
TMEM125
AHCYL2
REXO4
ADAMTS13
OR8B3
CTAG1B
CTAG1A
DUSP6
NFE2L3
UPK1B
OR5H15
HRH2
SLC35G3
PTPDC1
VTCN1
NUDT15
KIF2C
DBI
C2orf76
CHAF1B
NDUFV1
INPP5F
GJC3
PRKACB
HSD17B11
OTUD7A
CCDC83
N4BP2L2
KRTAP10-7
OPRL1
RGS19
LKAAEAR1
KRTAP10-8
PRAMEF14
THOC5
MYO5C
RTL8A
RTL8C
MIPOL1
EML2
S100A2
SLC38A9
SCGB1C1
ODF3
PNMA3
MYLK
PDAP1
BUD31
TULP4
MTERF1
RTP3
LTF
EIF4E
ZSCAN32
ZNF174
LIMS2
OR1E3
FGFBP3
PBX1
CHST3
OR6A2
SLC2A7
VPS13D
DNAJC25-GNG10
DNAJC25
PIN4
INSL6
MLLT1
PTCH1
PROKR2
ALDH7A1
ELAVL3
KLRD1
DIP2B
ZNF34
LCN8
LCN15
LCN6
DHRS7B
GTDC1
SFTPD
RAB29
MACROH2A1
ANKDD1A
RNF148
RNF133
ZNF577
SAMD9
OBSCN
ZNF436
BSDC1
MTRNR2L8
GTPBP6
KRBA1
ZSCAN31
MSH3
DHFR
MTRNR2L2
ZNF555
ZBTB26
RABGAP1
APOC3
APOA1
PTPRN2
DEGS2
ZNF3
APOBEC3B
ZNF572
SUMO3
INKA2
DDX20
KAT6B
ZNF514
NUF2
COL18A1
YJU2
SELENBP1
RBBP5
MTF2
RAB37
C19orf18
SLC1A7
ZNF426
YWHAQ
SNX20
SNX11
CBX1
RABGAP1L
ARHGAP39
GBA
NRARP
CAT
MROH7
MAPRE2
YY1AP1
DAP3
CHD1L
METTL7A
NEMF
GPRC5C
RPS7
GALNT1
MTRNR2L1
LBP
DMAP1
ZFP30
SAMD4B
GMFG
MRPL55
SRPRB
AURKAIP1
ZNF662
ZNF501
SF3A3
TMPRSS12
ZNF623
SPACA3
UBE2D3
SSBP1
IFI6
RPL39L
ZNF165
CISD2
PAXBP1
ACBD6
COX16
EXOC6
PLA2G4E
SAMD14
RBM33
JMJD1C
MAD1L1
TYW3
CRYZ
TBC1D19
TESK2
MMACHC
CCDC163
LMTK2
ZNF443
MAP3K2
C4B_2
C4B
SELENOH
EPB41L2
ZNF878
MACC1
C16orf54
RPS29
B3GALT2
CCDC130
PRRT1B
CREBL2
DCP1A
FRA10AC1
RNASET2
TRIP4
PCLAF
PEX3
ADAT2
RPL27
IFI35
UCKL1
ZNF613
REM1
DEFB124
HTR5A
COMMD2
MED23
ENPP3
CANT1
ZNF594
OAZ3
RBBP9
C1orf159
B4GALNT3
POU2F1
CXCR2
TTC32
TDP2
BAX
ACOT13
LOC110384692
C4A
FN3K
MRPS33
NBPF1
MSRA
DSTYK
NPAS4
BORCS7
LUC7L2
ZNF502
TM9SF2
FMC1-LUC7L2
FMC1
TTLL12
MRPL9
SMAD1
SUPT7L
SLC4A1AP
SLC24A1
INTS14
TATDN3
NSL1
ACTL8
FKBP9
RPGRIP1L
FTO
ZNF614
PARK7
LRP5L
ZNF566
STX18
EIF2D
ZMPSTE24
CRLF2
GLRA1
ZNF891
ZNF10
SPATA22
MDM4
INTS12
GSTCD
EAPP
NME1-NME2
NME1
SLC41A3
SLC33A1
CLTB
SCAF11
NDUFS7
GALK2
TMEM262
TACO1
KDM3A
FKBP11
ZNF32
FEM1B
LHFPL4
FAF1
PGLYRP4
TMEM161A
TMEM44
ITPR2
ASPA
ZNF391
RERE
LARP1
TMCO2
RPL37
CARD6
SAR1B
POLR3B
CALCRL
BRF2
NEU1
LSG1
NTSR2
LRP5
SLC17A5
REEP3
PLK2
MNAT1
TEFM
TM9SF1
GTF2H2C_2
NARS2
KIF5C
UBE2H
NCOA7
CYC1
DHRS2
HLA-E
SMIM12
RRAGB
DLAT
LOC100289561
TMEM41A
DRG2
STC1
VN1R4
RPS14
GTF3C3
CD14
FKBP5
IL21R
HMGB1
B3GNTL1
WDR36
RMDN2
VPS37C
DNAJB12
ZNF491
SAMD7
UTP3
ZNF829
ZNF568
CCDC59
RGPD2
RGPD1
LPIN1
SRSF7
PRDX3
RTTN
PPIP5K2
GIN1
VARS2
GTF2H4
TRMT5
SLC38A6
ALG10B
TTC26
USHBP1
BABAM1
GTF2H2
STX16
ST6GALNAC6
CNIH4
CHMP7
POLR2J3
PAFAH2
INPP4A
TEX46
KDM1A
ZNF440
ATP5MC2
TMBIM4
WDR11
ERV3-1-ZNF117
ERV3-1
SKP2
LMBRD2
TFPT
PRPF31
MACROD1
MOB4
ATL1
AP3S2
RPIA
POLDIP3
ZNF300
GPAA1
EXOSC4
INTS5
GANAB
GTF2H2C
VTA1
NMBR
TMEM68
TGS1
PDCD6IP
USPL1
ZNF772
GABPB2
SPATA6
RAD54L2
ZC3HAV1
PSEN1
INO80C
MTR
L2HGDH
DMAC2L
DEK
NCEH1
AIG1
PRIM1
HSD17B6
ALDH3A2
CLEC12A
DPY19L4
COQ8A
TBC1D14
ZKSCAN3
KANSL3
FER1L5
C1QTNF1
RPL32
RWDD2B
RAB30
ZNF317
SLC25A51
TAF12
POLE4
PDCD2
STAT3
RSF1
AAMDC
ATF7IP
MS4A10
NME4
DECR2
CCDC150
ZSCAN29
TUBGCP4
CLK4
MRPL44
NDUFB3
FAM126B
CDYL
DISP1
NPR1
ILF2
VAMP1
IPO4
ZNF350
PUM1
BANP
BAIAP2
METTL27
PRKAR2B
EIF3F
TOP3B
DNAJC6
ACTRT3
TBCK
DCLRE1B
AP4B1
AIMP1
PXDN
TOR1AIP2
TOR1AIP1
BFSP2
KMT2A
CLDN4
ZNF441
SAMD4A
TTYH2
AGL
ZNF408
ARHGAP1
TMEM43
CHCHD4
KSR1
ATP5MF-PTCD1
ATP5MF
STK19
DXO
SRFBP1
ENG
CCNT1
DCAF10
PPP1R3B
SLC44A1
ZNF222
MAP3K19
SPAAR
HRCT1
KRTAP5-2
SGPP1
CFAP298-TCP10L
CFAP298
NMNAT2
MRPL40
HIRA
ADNP
PRAMEF1
LY6L
TIGD2
MITD1
MRPS31
TTI2
TLE7
CDK5RAP1
CCDC97
PLEKHM3
PPP6R1
RCAN1
AP3B1
EPRS1
LBR
MOS
SLC35G5
KLHL41
IQGAP1
CAPN11
MTIF2
HERPUD2
TSEN15
NUP54
PARP15
SLTM
PDE4DIP
ESCO1
SLC45A4
LMBR1L
JMJD4
EFHD2
PHGDH
C5orf34
CEP72
CDC73
ARRDC2
BDH1
TMBIM6
LIMS1
PTRHD1
CENPO
H4C8
ADCY3
MRPL21
IGHMBP2
RNF217
FAIM
H4C12
H4C11
WDR74
BNIP1