ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190305 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX150671: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX672002: ES cells

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX1925740: iPS derived neural cells

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◣ SRX190305: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX1497516: MCF-7

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

UBE2H
KRBA1
MOB1B
MKLN1
EAPP
TAF12
RHCE
PTPRF
ERMN
PDZK1IP1
TSHZ2
RELN
TANGO2
ARVCF
PRKAB1
PARP16
BSDC1
MACC1
RTN4
SNAP29
PI4KA
BTNL10
NFE2
DRC7
RHD
ABCB10
CPOX
WDR74
STX5
KIF5C
PYCR2
GYPB
IL13
MARCHF2
C1orf167
MSH3
DHFR
MTRNR2L2
DCLRE1B
AP4B1
SLC6A9
MFSD2B
KAT6B
RNF217
IL1R1
HNRNPF
AVPR2
GYPE
OBSCN
SLC4A1
TSKU
RAB33A
BNIP3L
CCDC200
MAN2A2
SMYD3
TMEM107
SUMO3
SAMD14
ATF6B
FKBPL
ORAI2
TMEM120A
BTG2
ADCY3
MTRNR2L8
LIMS1
COL18A1
ZNF117
ERV3-1-ZNF117
ERV3-1
CYP3A43
PCNT
C21orf58
MFAP3L
UBE2F
SULT2A1
TRIM67
OR10AC1
OR10V1
GYPA
EPB41
LEPR
LEPROT
POLDIP3
PHF19
CASS4
C3orf86
PGLYRP4
SIRT4
PRKAR2B
NOS1AP
SPATA46
C1orf226
CCM2
SERPIND1
GTPBP4
THEMIS2
S100Z
POLM
KIF2C
USP21
PPOX
UCP3
MGAT5
FLVCR1
ZBTB26
RABGAP1
CLCA1
FKBP5
CCDC88B
ST6GAL1
VILL
C1orf116
DAGLB
SNX20
ELAC1
KCNH2
KLF2
HDAC6
TRIM63
MTRNR2L9
SLC25A33
DNMT3B
COMMD7
EHD1
LMLN2
CEBPE
RPP25
SLFN14
EXOSC9
GUCA1B
CLUL1
LBP
TUBA1C
KSR1
GJC3
IL36A
MAD2L1BP
GTPBP2
ANKRD61
KIAA1586
ZNF273
RHAG
FRMD4A
HTR4
RAPGEF5
ZNF77
HAGH
FAHD1
RINL
ZNF79
RNF10
GPR182
SLC43A3
ZSCAN31
TCP11L2
LMTK2
TENT5C
VWCE
AVEN
GP9
FN3K
ZFPM2
SEPTIN5
GP1BB
MYOG
IL18BP
PTPN6
C12orf57
RGPD2
RGPD1
NUP214
SMCO1
RNF168
SLC29A1
MYMX
DEGS2
C4orf45
ZNF852
ZMYND8
FKBP8
SCMH1
TPGS1
KCNJ15
ITGA2B
BCL7B
ZDHHC3
EXOSC7
ZWINT
OAZ2
SLC1A7
FCGR1A
COX6A1
MINDY4
INMT
MRRF
CCP110
MRPL35
IMMT
TUBB1
CLP1
YPEL4
SAMD4A
DNAJB2
GPRC5C
PPP1R15A
PLEKHA4
ZNF683
HEMGN
ZNF451
TMEM114
MROH7
DNAJC6
TFDP2
SLC45A3
NPL
THUMPD1
UBAC1
ARHGAP39
PRAME
POM121L2
ZNF474
PRRT1B
TMBIM1
NUPR2
CHCHD2
NARF
NXF3
CRYBG1
TBL1X
CDC42EP1
SVBP
ERMAP
SDE2
STOML3
CLCN3
LARP1
TCEANC
LDHD
TTI2
AQP1
DNAJB4
CMIP
YIF1B
KCNK6
COLGALT2
TOP3B
HERPUD2
DCP1A
TF
BSG
CA1
ZNF550
ADGRE5
PLCL2
IL1RL1
TBC1D24
NTN3
OAZ1
JSRP1
RBBP5
UPK1A
KIF3B
LRRC37A3
TMEM74B
PPP1R14C
FAM83A
ATP5F1B
MST1
WRN
PURG
ALAS2
POLD4
LYL1
LAMB1
ZNF696
ARHGEF12
ZNF564
CCNB3
SIGLEC12
AKAP4
CHPT1
SH3BGRL3
SLC2A1
HSF5
TCTEX1D1
ADNP
FBLN2
ADARB1
TREM1
SLC25A42
METTL7A
TAL1
HDC
SSBP1
TTC26
USP4
GPX1
TNFAIP8
DSTYK
ZNHIT6
NPAS4
ADAMTSL4
LIPC
RSF1
AAMDC
PRDM8
PRKAR1B
CD2
PDK1
MARK3
EEF1A1
RAB32
ST6GALNAC1
FAXDC2
YPEL3
TBX6
TSPAN32
C11orf21
BRSK2
GALNT5
ST20-MTHFS
ZNF3
GBA
SPTAN1
DHRS3
XAGE2
NDST1
EMILIN2
SNAI3
PCSK7
RNF214
CANX
FAM210B
TXN2
ASIC4
PXN
AQP8
AFAP1L1
ZNF777
STBD1
CD59
PPP1R14D
LGALS12
GNB1
TES
AGPAT1
BIRC2
HDAC11
TP53INP2
KRT10
GORASP2
FBXO9
CILK1
CSF1
CCDC91
AIG1
H2AX
HMBS
CR1L
IFT46
ARCN1
ASIC3
CSPP1
COPS5
ZNF557
RUNX1T1
OR52A1
GATA1
RCC1
RPS7
DMAP1
TFR2
PHKB
ITFG1
PACRGL
STOML2
FAM214B
SEPTIN9
ALOX12
TBX19
PITHD1
RAP1GAP
F2RL3
NUF2
DGKD
RPUSD2
CCDC32
TMEM244
KMT5A
ZNF347
EPRS1
CPQ
FAM98C
C1orf100
KEL
TNFRSF1B
EXOC3
HDDC2
AADACL2
TGIF1
SPRR2A
TRMT5
SLC38A6
BCL3
TMEM191C
AP1M1
UROS
BCCIP
FECH
VIL1
ZNF169
CALML3
ABCB6
STRIP2
ARID3B
PIGV
TEDC1
CRIP1
CRIP2
MRPL40
HIRA
SNX11
CBX1
TNFAIP3
HDHD3
CREB3L3
IL21R
NFIB
FOXN1
EXOC6
MTSS2
NRCAM
RAB42
HAPLN2
PLSCR2
C10orf71
TRIP4
PCLAF
PTK2B
TRIM35
VPS9D1
CXXC5
TMEM242
TMEM262
BHLHA15
UQCRC1
TMEM89
MTHFR
CLCN6
PPARGC1B
SLC2A9
SELENOH
SSX2IP
PPM1F
SMG8
WHAMM
FSD2
TXK
LTBP1
SLC25A17
EIF2AK1
NLRP2
SLC3A2
NPPA
MED18
CSNK1G2
CORO1C
TMEM9
MED23
ENPP3
RIPOR3
MRGPRX1
PPIG
DOCK7
EIF1
UTP25
BLM
SLC38A8
H4C4
H2BC6
H3C4
SLC7A8
VMP1
PTRH2
CIAO3
CHSY1
OR2C1
CDCA7
CYB561
TMEM94
INPP5B
TPM4
PCIF1
POU2F3
RABGAP1L
DDIT4
ZC3HAV1L
ACY3
MRPS33
DDR1
ARRDC2
TMCC2
TGM1
RFX1
GPR42
MTF2
PDP1
HTR5A
ELOF1
OR52A5
MRPS16
PEX3
ADAT2
DNAJC9
ABCF3
TTC39A
TMOD1
FAM110A
HOOK2
CLCNKB
JUNB
DDC
ELMO1
CPT2
TSPAN33
NTSR2
TSPAN17
TGM2
CD69
SLC5A11
TMEM248
ADAMTS14
RNF144A
CRISP3
INO80C
YY1AP1
DAP3
ZNF438
AADACL4
ZBTB33
NOS3
PSMD12
PITPNC1
IFFO1
RBM28
OPN1SW
CCDC136
SLC37A3
YWHAH
C22orf24
METTL8
DCAF17
FOXO3
IRAK2
NME1-NME2
NME1
HK1
CCDC71L
PI16
TIMM10
SMTNL1
UROD
HECTD3
STMP1
LUC7L2
FMC1-LUC7L2
FMC1
CNKSR3
SSH1
OR4K17
SPINT2
DOCK9
MPP1
OR52N2
PRPH2
TATDN2
BCAS1
FGFR3
GCNT7
FAM209A
GOLGA5
GUK1
GJC2
TEPP
CNGB1
MAGEA11
SPSB1
IBA57
C2orf88
MTRNR2L10
GLRA1
RAB21
RAB3IL1
RHEX
GALNT10
HEPH
C11orf96
CYBRD1
CRYAB
C11orf52
HSPB2
AURKAIP1
STX1A
MFSD6
HOMEZ
EZH1
RAMP2
SAMD4B
GMFG
SAMD7
COL1A1
WDR33
ZNF510
PEX7
LCA5
SIGLEC14
C5AR2
MIER1
DNAI4
KLHL20
GFI1B
TMPPE
GLB1
ZNF669
MPZL1
FPR3
PDCD6IP
DHH
PKHD1L1
CDH23
NSD2
FEM1C
TLCD4
TLCD4-RWDD3
RBM33
PDE4B
TATDN3
NSL1
SORD
VWA7
SPINK4
CXCL6
TRUB2
COQ4
SLC12A7
MAPRE2
INTS12
GSTCD
NDUFA4
PPP6R1
PTPRH
IER3IP1
XKR7
SMARCD2
CAB39
CDC14A
DCTN2
KIF5A
COQ8A
F11R
LUC7L
FAM234A
PLIN3
HERC1
SLC14A1
ATP6V0A2
PACSIN2
VMO1
PSMB6
GLTPD2
UTP3
SACM1L
SF3A3
SPTBN4
BLVRB
POLR3B
GABRR2
CCL28
CYP26A1
SAR1B
RMND5B
OPN1MW
OPN1MW3
OPN1MW2
LPIN1
SKP2
LMBRD2
OPA1
LSM12
G6PC3
COX7A2L
TRMT2A
RANBP1
SP140
SP110
RPS3
CDT1
FOXK2
APOBEC1
COX16
H2AZ2
ASF1A
SUSD1
ACVRL1
ZNF562
NDUFS7
INTS5
GANAB
PISD
ZNF485
GCNT2
STK11
ZMPSTE24
TMCO2
UBR2
HEATR3
CTPS1
H4C12
H4C11
H2BC14
H2AC14
TEAD2
DKKL1
PRXL2B
TBC1D7-LOC100130357
TBC1D7
PAFAH2
CDCP1
RBM8A
CTAG1B
CTAG1A
FRG1
E2F1
ZSCAN30
RMND5A
TMEM259
CNN2
CTSB
PDE11A
EIF2D
ELMOD2
RHBDD1
RAB27A
SLC25A2
RHOT1
TEX46
KDM1A
NDUFAF1
WASHC2C
RCL1
DOT1L
PRKACG
LY6L
PRR5
USP6NL
ABCC5
MAP3K8
TEKT2
ADPRS
NCLN
H4C3
H1-6
BROX
AIDA
KRTCAP3
GALNT1
TSFM
ZNF513
SNX17
EIF2B4
RCSD1
CCRL2
GTPBP6
ZNF385A
LRRC37A
TLE2
FGF13
LRRC8D
PAF1
ZNF708
POLE4
SPDYE14
SPDYE10P
CCDC174
ZC3HC1
KIAA1522
SEC13
RALBP1
VIRMA
KNL1
USP48
PRDM11
CCDC106
U2AF2
EIF4A3
CHIT1
ZNF391
PRIM2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
KRT25
KRT26
SKIL
MYCL
MFSD12
TRIT1
MTRNR2L1
MRPS15
DPEP2
DPEP3
SELPLG
SERP2
POLR2E
GPX4
NPRL3
HBZ
MITD1
FAM228B
TP53I3
SF3B6
DRAP1
C11orf68
CENPF
MAD2L2
FBXO6
NUP210L
THEM4
BMS1
ZBTB40
EPS15
MMRN1
TMEM43
CHCHD4
ABHD15
APOC3
APOA1
GYG2
NFXL1
SLC13A3
GCAT
H1-0
DNAJB12
RAB11FIP1
ASF1B
PTPRN2
CCL24
PLAC8L1
PDRG1
IFNAR1
WDFY2
IL1A
CD53
GAD2
C8orf37
GADD45A
PIP
TRIM7
BCOR
FZR1
BPGM
MYL4
TRIM17
H3-4
SNCG
MMRN2
PSAP
FAM187B
GHRHR
IMPG2
E2F2
ARF4
MAP3K4
ZNF426
ZSCAN25
C20orf203
CREG1
APOBEC3B
TBC1D19
ELAVL3
ZC3H10
RPL41
ESYT1
NUGGC
ELP3
TFRC
VTA1
NMBR
TMEM79
SMG5
DPP9
SLC24A1
INTS14
ATP5MC2
NME4
DECR2
PGAP6
SMAP2
HSPA6
GDPD5
EEF2K
TSGA10IP
TXNDC2
MTIF2
VAPB
INTS6L
MSRA
DHTKD1
P2RX6
ZHX3
KRT3
CYP21A2
SPI1
LSG1
DDX42
CCDC47
COMT
TXNRD2
TMEM275
ANO1
KNCN
RPL27
IFI35
TBC1D14
NPAT
ATM
TNR
ZNF436
LEP
SLC27A5
ZBTB45
ATP2C1
LY6G6F-LY6G6D
LY6G6F
ABHD16A
SLC25A37
BAAT
PADI4
ZNRD2
FAM89B
EHBP1L1
NQO2
CATSPERE
ADSS2
ZSCAN12
OGA
TMPRSS3
UBASH3A
SPATA32
SPRED2
PLXNB3
TOR1AIP2
TOR1AIP1
SERPINB1
SEC22B
GTF2B
RSAD2
RABEP2
CD19
SLC40A1
DHX16
LONRF2
SIAE
NDUFA5
SPA17
TACO1
POLG
ANO10
ZDHHC14
ABHD5
H2AC15
H2BC15
TMEM87B
FAM180B
NDUFS3
KBTBD4
RFX7
TEX9
ALDH1A2
BPIFB3
SMIM12
POLR2J3
H4C8
NECAP2
CENPC
RNF181
STAP1
VAMP5
ZNF792
TRIM69
WDR70
NUP155
ST7
MEF2C
FAT1
TMEM14B
AKR1C1