Search for Data Metadata
| Data name ⇅ | Database name ⇅ | DOI ⇅ | Description of data contents ⇅ | Data acquisition method ⇅ | Data analysis method ⇅ | Data detail |
|---|---|---|---|---|---|---|
| PSCID List | PSCDB | 10.18908/lsdba.nbdc01636-001 |
The list of PSCID and common elements of each entry |
PDB |
Data detail
open_in_full
|
|
| QTL Information Table | Q-TARO | 10.18908/lsdba.nbdc01234-001 |
1051 QTLs extracted from 463 reports are recorded as representative QTLs (As of March 31, 2008). |
5096 QTLs were extracted from 1214 reports previously published.
|
The positions of these QTLs were estimated from the physical positions of either two flanking markers (the genomic positions of the distal ends of the two markers) or a co-segregated single marker (between the start and end positions on the genome). By screening for redundancy of traits at the same physical positions, representative QTLs were selected. |
Data detail
open_in_full
|
| Experimental information | RED II INAHO | 10.18908/lsdba.nbdc01557-002 |
Outline of the experiment including sample combinations of each round. |
- |
- |
Data detail
open_in_full
|
| Expression data | RED II INAHO | 10.18908/lsdba.nbdc01557-004 |
Normalized expression data derived from experiments. |
This table contains normalized expression data derived from various experiments hybridized to RED (Rice 9K Array) and ARRAY22K (Rice 22k Array). |
The data were normalized by data processing, including PRIM (processing implementation for microarray) filtering, and ‘sector median’ normalization, performed at each spotting sector on the glass slide to remove uneven sectors. All the expression data are shown as values of the expression ratio. |
Data detail
open_in_full
|
| Probe data | RED II INAHO | 10.18908/lsdba.nbdc01557-001 |
Probe information |
- |
- |
Data detail
open_in_full
|
| Data name | Database name | DOI | Description of data contents | Data acquisition method | Data analysis method | Data detail |