Search for Data Metadata
| Data name ⇅ | Database name ⇅ | DOI ⇅ | Description of data contents ⇅ | Data acquisition method ⇅ | Data analysis method ⇅ | Data detail |
|---|---|---|---|---|---|---|
| Data of structural flexibility | ConfC | 10.18908/lsdba.nbdc00400-004 |
The regions of structural flexibility are selected with the Z score of temperature factor (B-factor) values by Cα atom of each residue in PDB. |
PDB (Protein Data Bank) |
The regions of structural flexibility are selected with the Z score of temperature factor (B-factor) values by Cα atom of each residue in PDB. |
Data detail
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| Protein structure image | ConfC | 10.18908/lsdba.nbdc00400-006 |
Structure images of the protein which has structural flexibility.
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Data detail
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| Supplement data for conformation changes by some binding | ConfC | 10.18908/lsdba.nbdc00400-002 |
The distance values of φ and ψ between the superimposed protein structures of each residues are calculated, and the Z score of distance is computed.The information about a regions of structural change sekected with the Z score is stored. |
PDB (Protein Data Bank) |
The distance values of φ and ψ between the superimposed protein structures of each residues are calculated, and the Z score of distance is computed. Finally, the regions of structural change are selected with the Z score |
Data detail
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| InCeP | CREATE portal | 10.18908/lsdba.nbdc00403-002 |
mKIAA intracellular signaling pathway. |
Immunoprecipitation: Extracts derived from adult mouse tissues and cell lines were immunoprecipitated using anti-mKIAA antibodies.
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Mass spectrometry: Results obtained by LC-MS were analyzed by Mascot and precipitated proteins were predicted.
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Data detail
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| InCeP images | CREATE portal | 10.18908/lsdba.nbdc00403-003 |
Image files of mKIAA intracellular signaling pathway. |
From "Keymol net data" |
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Data detail
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| Data name | Database name | DOI | Description of data contents | Data acquisition method | Data analysis method | Data detail |