| Data name ⇅ | Database name ⇅ | DOI ⇅ | Description of data contents ⇅ | Data file ⇅ | Simple search URL ⇅ | Data acquisition method ⇅ | Data analysis method ⇅ | Number of data entries ⇅ | Data detail |
|---|---|---|---|---|---|---|---|---|---|
| Japonica genome blast search result | KOME | 10.18908/lsdba.nbdc00120-011 |
Results of blastn searches against japonica genome sequences |
kome_japonica_genome_blast_search_result.zip
(802 KB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_japonica_genome_blast_search_result#en |
Genome contig sequences of japonica rice used for the searches were obtained from the TIGR Rice Genome Database at the time of Oct. 1st, 2005. |
Performed blastn (blast 2.2.12) searches against the japonica rice genome sequences.
|
35,778 entries |
Data detail
open_in_full
|
| Main | KOME | 10.18908/lsdba.nbdc00120-001 |
List of datasets |
kome_main.zip
(1.3 KB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_main#en | 33 entries |
Data detail
open_in_full
|
||
| Mapping data | KOME | 10.18908/lsdba.nbdc00120-003 |
Mapping information with the japonica rice genome sequences obtained from the International Rice Genome Sequencing Project (IRGSP) |
kome_mapping_data.zip
(723 KB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_mapping_data#en |
Mapped the full-length cDNA clones to the japonica rice genome BAC contigs. |
30,643 entries |
Data detail
open_in_full
|
|
| Mapping data detail | KOME | 10.18908/lsdba.nbdc00120-004 |
Detailed mapping information with the japonica rice genome sequences from the International Rice Genome Sequencing Project (IRGSP) |
kome_mapping_data_detail.zip
(2.3 MB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_mapping_data_detail#en |
Mapped the full-length cDNA clones to the japonica rice genome BAC contigs. |
154,484 entries |
Data detail
open_in_full
|
|
| Mapping Pseudomolecule data | KOME | 10.18908/lsdba.nbdc00120-005 |
Mapping information with the TIGR japonica Pseudomolecules |
kome_mapping_pseudomolecule_data.zip
(719 KB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_mapping_pseudomolecule_data#en |
Mapped the full-length cDNA clones to the TIGR japonica Pseudomolecules. |
30,892 entries |
Data detail
open_in_full
|
|
| Data name | Database name | DOI | Description of data contents | Data file | Simple search URL | Data acquisition method | Data analysis method | Number of data entries | Data detail |
List of Data Metadata