About This Database

Mapping Pseudomolecule data

Data description

Data name

DOI

Description of data contents

Mapping information with the TIGR japonica Pseudomolecules

Data file

File name :

kome_mapping_pseudomolecule_data.zip

File URL :

File size :

719 KB

Simple search URL

Data acquisition method

Data analysis method

Mapped the full-length cDNA clones to the TIGR japonica Pseudomolecules.

Number of data entries

30,892 entries

Data detail

Data item	Description
ACCESSION_NO	Accession number of the full-length cDNA clone
CLONE_NAME	Name of the full-length cDNA clone
HIT_NUMBER	Number of the sites where the cDNA clones were mapped
PSEUDOMOLECULE	Name of the mapped pseudomolecule
CHROMOSOME	Chromosome number of the mapped pseudomolecule
CHR_START_POS	Alignment start position on the mapped pseudomolecule
CHR_END_POS	Alignment end position on the mapped pseudomolecule
CDNA_START_POS	Alignment start position on the mapped cDNA clone
CDNA_END_POS	Alignment end position on the mapped cDNA clone
STRAND	Strand direction of the mapped cDNA clone
TU_ID	ID of the mapped TU (Transcriptional Unit)